# STOCKHOLM 1.0
#=GF ID 2.60.200.10/FF/000014
#=GF DE Interferon regulatory factor 3
#=GF AC 2.60.200.10/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 87.251
#=GS C0HAD6/258-482      AC C0HAD6
#=GS C0HAD6/258-482      OS Salmo salar
#=GS C0HAD6/258-482      DE Interferon regulatory factor 3
#=GS C0HAD6/258-482      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Salmo; Salmo salar; 
#=GS C0HAD6/258-482      DR GO; GO:0010628; GO:0070976; 
#=GS B7SEE0/190-426      AC B7SEE0
#=GS B7SEE0/190-426      OS Danio rerio
#=GS B7SEE0/190-426      DE Interferon regulatory factor 3
#=GS B7SEE0/190-426      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS B7SEE0/190-426      DR GO; GO:0044212; 
#=GS F9UKT9/242-464      AC F9UKT9
#=GS F9UKT9/242-464      OS Oncorhynchus mykiss
#=GS F9UKT9/242-464      DE Interferon regulatory factor 3
#=GS F9UKT9/242-464      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus mykiss; 
#=GS F9UKT9/242-464      DR GO; GO:0048471; 
#=GS G1KPE3/224-450      AC G1KPE3
#=GS G1KPE3/224-450      OS Anolis carolinensis
#=GS G1KPE3/224-450      DE Interferon regulatory factor 3
#=GS G1KPE3/224-450      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS F7CZW4/247-470      AC F7CZW4
#=GS F7CZW4/247-470      OS Xenopus tropicalis
#=GS F7CZW4/247-470      DE Interferon regulatory factor 3
#=GS F7CZW4/247-470      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS W5NKM8/244-460      AC W5NKM8
#=GS W5NKM8/244-460      OS Lepisosteus oculatus
#=GS W5NKM8/244-460      DE Uncharacterized protein
#=GS W5NKM8/244-460      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS H2LQS1/236-450      AC H2LQS1
#=GS H2LQS1/236-450      OS Oryzias latipes
#=GS H2LQS1/236-450      DE Uncharacterized protein
#=GS H2LQS1/236-450      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS D2SQZ9/257-481      AC D2SQZ9
#=GS D2SQZ9/257-481      OS Salmo salar
#=GS D2SQZ9/257-481      DE Interferon regulatory factor 3
#=GS D2SQZ9/257-481      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Salmo; Salmo salar; 
#=GS D2SQZ9/257-481      DR GO; GO:0010628; GO:0070976; 
#=GS F7CZX8/224-424      AC F7CZX8
#=GS F7CZX8/224-424      OS Xenopus tropicalis
#=GS F7CZX8/224-424      DE Uncharacterized protein
#=GS F7CZX8/224-424      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A0A060YDW3/242-464  AC A0A060YDW3
#=GS A0A060YDW3/242-464  OS Oncorhynchus mykiss
#=GS A0A060YDW3/242-464  DE Uncharacterized protein
#=GS A0A060YDW3/242-464  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus mykiss; 
#=GS A0A1S3NH45/257-481  AC A0A1S3NH45
#=GS A0A1S3NH45/257-481  OS Salmo salar
#=GS A0A1S3NH45/257-481  DE interferon regulatory factor 3 isoform X2
#=GS A0A1S3NH45/257-481  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Salmoniformes; Salmonidae; Salmoninae; Salmo; Salmo salar; 
#=GS A0A3B3HMY4/248-463  AC A0A3B3HMY4
#=GS A0A3B3HMY4/248-463  OS Oryzias latipes
#=GS A0A3B3HMY4/248-463  DE Uncharacterized protein
#=GS A0A3B3HMY4/248-463  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9KY74/248-463  AC A0A3P9KY74
#=GS A0A3P9KY74/248-463  OS Oryzias latipes
#=GS A0A3P9KY74/248-463  DE Interferon regulatory factor 3
#=GS A0A3P9KY74/248-463  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9MB50/231-445  AC A0A3P9MB50
#=GS A0A3P9MB50/231-445  OS Oryzias latipes
#=GS A0A3P9MB50/231-445  DE Interferon regulatory factor 3
#=GS A0A3P9MB50/231-445  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9HVQ0/248-463  AC A0A3P9HVQ0
#=GS A0A3P9HVQ0/248-463  OS Oryzias latipes
#=GS A0A3P9HVQ0/248-463  DE Interferon regulatory factor 3
#=GS A0A3P9HVQ0/248-463  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 15
C0HAD6/258-482              EQFTNELSRTMVGENFKTHFRVSVYYRGLKMLEQLVENEAGFRLVYRPELTQPLLDPDSGLNLVSLPSPPPVRDETQAKLTQDILALLGEGLEVGASGPIIYGLRKGGIKAFWSLDKFDKS---RRPQAVSKF-PEPLYQAKDFYG-------------------------GLLKFMDSHRGECPPFSLFFCLGEKWPDPDNRPWEKKLVMVEVVLTALELLKSIAVEGGASSLQSVELQLSLQESLQ---------------EMMDLC
B7SEE0/190-426              --------TAIPEPNLATFFRIKVYYKGKMVMEQLVENDSGFRLMYHRNMDESGLQDGAGLPVVTLPPAEGMPDQMQTRLTNDILDNLG-GLEIRRSDGVIHGHRWGSSRIYWGLCKHERS---QTPRELSKNTPQPIYLMKDYISGGRPVNFLAEVDLNKHGCLMVYRSVGLMQFI-QTGGESPSCTLYFFLGEKWPDPKMKPWEKKLIMIEVNLTALEFLKSMAVEQGASSLQSDE----LQLSLE---------------QMMELC
F9UKT9/242-464              -QLTNELSRTMVDENFKAHFRVSVYYRGVKMPEQLVENEAGFRLVYRPELTQPLLDPDSGLNLVSLPSPPPVRDETQAKLTEDILALLGEGLGVGASGSIIYGLRKGEIKAFWSLDKFDNS---RRPQGVSKC-PEPLYQAKDFYG-------------------------GLLKFI-NNEGKCPPFSLFFCLGEKWPDPDNRPWEKKLVMVEVVLTSLELLKSMAVEGGASSPQSVELQLSLQEYLQ---------------EMMDLC
G1KPE3/224-450              -NTVQPLQQILEAPTLVTDFEVRIYYRGRQVFTQVFSNVRGLCFLPPG-----YSGSDPDLADVIFPNPENLNDHLQASYSQRLIQGVSPGVLLCVEGQSLCGMRRGPCHIYWGQSEFPAE--GMLHGELPKERLGPMYSLQQFVH-------------------------ELIGFM-EGQNGSPNYSLWLCFGEQWPDT-NRPWKKKLIMVEVIPKVFELLHEMSKARGASSLGQPD----LRISDSPQQPCFLDQ-LRSWEERME--
F7CZW4/247-470              --------HFFQDGTLKTEFEVTVYYRGTEVSKSLVKNPHGFRITSKQ-----HADPGSYLDNVVLPLPTKIHDQGVVGEIHKLLKNLENGTLVEVREGSICGKRQGNCRAFWSMTEVPET---NQPNQIDKNDYCILFTLQQFVS-------------------------DLTAFIERTRKDSPQYNIWMCLGERWPDG--RPWKKKFIMVQIVPVAMKMLHDMSYSTGASSLRSSEIN--LEISDSLSSTNDLMAVLRELQEMMDYE
W5NKM8/244-460              ------IYR-------TTQFHVTVYFRGVKVREHEVTNPRGFRVVWTD---PCAAVDPEGLELVSLPGPELLLDQGQARLTHRILEKLGAGLEVTVQGRGVRAARWGDTHAFWSLSRFDRS---GQPREVPKERGEELYSMGEFIR-------------------------GLIGFM-EQKAESPAYSVWFCLGEKWPDPDQRPWEKKLIMLEVVLTSLQMLKMLAVQGGASSLQSESVD--LQVSDNPSLLSHLYS-L----ESMDFS
H2LQS1/236-450              ---MDTMHRTQDGN--KTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDVQNGPSLVSLPGPGNMLDQVQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSKFDTS---KTPQEVSKLNPATLFHFKDFLQ-------------------------GIINF--SKGGDCPPCSLFFCLGEKWPDPQNRPWTKKLITIEVVLTSLEILKNIAVEGGASSLQSVE----LQESLG---------------EMMDLC
D2SQZ9/257-481              EQFTNELSRTMVGENFKTHFRVSVYYRGLKMLEQLVENEAGFRLVYRPELTQPLLDPDSGLNLVSLPSPPPVRDETQAKLTQDILALLGEGLEVGASGPIIYGLRKGGIKAFWSLDKFDKS---RRPQAVSKF-PEPLYQAKDFYG-------------------------GLLKFMDSHRGECPPFSLFFCLGEKWPDPDNRPWEKKLVMVEVVLTALELLKSIAVEGGASSLQSVELQLSLQESLQ---------------EVMDLC
F7CZX8/224-424              -----------PRTIGETKFGVGIYYRGTLVKETEVSNRYGFCVTSRD-----CPAPGSYLEHVLLPAPTMIPNQKAAQEIRQVLKRMEDGVCVEMRDGAICGKRRGKCRAFYSMTNVPRTPEEMESREIEKYGYSVLYSVQQFIT-------------------------ELTAFLQRTTRESPRYTIWLCLGEMWPDP--RPWEKTFVMVKITPIAMKDVHDLSYRTGASSLHSDEVN--LQFS-----------------------
A0A060YDW3/242-464          -QLTNELSRTMVDENFKTHFRVSVYYRGVKMPEQLVENEAGFRLVYRPELTQPLLDPDSGLNLVSLPSPPPVRDETQAKLTQDILALLGEGLEVGASGSIIYGLRKGEIKAFWSLDKFDNS---RRPQGVSKC-PEPLYQAKDFYG-------------------------GLLKFI-NNEGKCPPFSLFFCLGEKWPDPDNRPWEKKLVMVEVVLTSLELLKSMAVEGGASSLQSVELQLSLQEYLQ---------------EMMDLC
A0A1S3NH45/257-481          EQFTNELSRTMVGENFKTHFRVSVYYRGLKMLEQLVENEAGFRLVYRPELTQPLLDPDSGLNLVSLPSPPPVRDETQAKLTQDILALLGEGLEVGASGPIIYGLRKGGIKAFWSLDKFDKS---RRPQAVSKF-PEPLYQAKDFYG-------------------------GLLKFMDSHRGECPPFSLFFCLGEKWPDPDNRPWEKKLVMVEVVLTALELLKSIAVEGGASSLQSVELQLSLQESLQ---------------EMMDLC
A0A3B3HMY4/248-463          ----DTMHRTQDGNSIKTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDVQNGPSLVSLPGPGNMLDQVQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSKFDTS---KTPQEVSKLNPATLFHFKDFLQ-------------------------GIINF--SKGGDCPPCSLFFCLGEKWPDPQNRPWTKKLITIEVVLTSLEILKNIAVEGGASSLQSVE----LQESLG---------------EMMDLC
A0A3P9KY74/248-463          ----DTMHRTQDGNSIKTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDVQTGLSLVSLPGPGNMLDQMQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSKFDTS---KTPQEVSKLNPSTLFHFKDFLQ-------------------------GIINF--STGGDSPPCSLFFCLGEKWPDPQNRPWTKKLITIEVVLTSLEILKNMAGEGGASSLRSVE----LQESLG---------------EMMDLW
A0A3P9MB50/231-445          ---MDTMHRTQDGN--KTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDVQTGLSLVSLPGPGNMLDQMQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSKFDTS---KTPQEVSKLNPSTLFHFKDFLQ-------------------------GIINF--STGGDSPPCSLFFCLGEKWPDPQNRPWTKKLITIEVVLTSLEILKNMAGEGGASSLRSVE----LQESLG---------------EMMDLW
A0A3P9HVQ0/248-463          ----DTMHRTQDGNSIKTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDVQTGLSLVSLPGPGNMLDQMQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSKFDTS---KTPQEVSKLNPSTLFHFKDFLQ-------------------------GIINF--STGGDSPPCSLFFCLGEKWPDPQNRPWTKKLITIEVVLTSLEILKNMAGGGGASSLRSVE----LQESLG---------------EMMDLW
#=GC scorecons              00012132432233225849573698894563645759449866545422122355444574495893833538636745654683376396474556336582959446587744565360003365565922434773365843000000000000000000000000066539304445569456656789969996248995977766776655664864663459999857471100973743000000000000000647642
#=GC scorecons_70           _________________*_*_*__****__*_*__*_*__***_________________*__*_**_*____**_**_____**__*__**_*___*__*_*_*_*____***____________*__*_*_____**____*___________________________**__*________*__**_*****_****__***_********_*__**_**__*___*****_*_*____**_*_________________*_*___
#=GC scorecons_80           _________________*_*_*__****_______*_*__**__________________*__*_**_*____*___*______*__*__*__*________*_*_*____***_________________*_____**____*_______________________________*________*______****_***___***_***____*_______*_______*****_*_*____**_*___________________*___
#=GC scorecons_90           _________________*_*____****_________*__*______________________*__*_______________________*___________*_*_*________________________*___________*_______________________________*________*________**_***___***_*______________________*****________*__________________________
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