# STOCKHOLM 1.0
#=GF ID 2.40.50.100/FF/000082
#=GF DE Exosome complex component Rrp4
#=GF AC 2.40.50.100/FF/000082
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 92.549
#=GS B1L6N8/1-59      AC B1L6N8
#=GS B1L6N8/1-59      OS Candidatus Korarchaeum cryptofilum OPF8
#=GS B1L6N8/1-59      DE Exosome complex component Rrp4
#=GS B1L6N8/1-59      DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GS Q8TPX7/3-50      AC Q8TPX7
#=GS Q8TPX7/3-50      OS Methanosarcina acetivorans C2A
#=GS Q8TPX7/3-50      DE Exosome complex component Rrp4
#=GS Q8TPX7/3-50      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; 
#=GS Q8ZVM8/1-55      AC Q8ZVM8
#=GS Q8ZVM8/1-55      OS Pyrobaculum aerophilum str. IM2
#=GS Q8ZVM8/1-55      DE Exosome complex component Rrp4
#=GS Q8ZVM8/1-55      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; 
#=GS Q5JIR5/1-57      AC Q5JIR5
#=GS Q5JIR5/1-57      OS Thermococcus kodakarensis KOD1
#=GS Q5JIR5/1-57      DE Exosome complex component Rrp4
#=GS Q5JIR5/1-57      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS A9A5C8/5-52      AC A9A5C8
#=GS A9A5C8/5-52      OS Nitrosopumilus maritimus SCM1
#=GS A9A5C8/5-52      DE Exosome complex component Rrp4
#=GS A9A5C8/5-52      DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus maritimus; 
#=GS I3D054/5-52      AC I3D054
#=GS I3D054/5-52      OS Candidatus Nitrosopumilus salaria BD31
#=GS I3D054/5-52      DE Exosome complex component Rrp4
#=GS I3D054/5-52      DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Candidatus Nitrosopumilus salaria; 
#=GS A0A3M6K0X8/5-52  AC A0A3M6K0X8
#=GS A0A3M6K0X8/5-52  OS Nitrosopumilus sp.
#=GS A0A3M6K0X8/5-52  DE Exosome complex component Rrp4
#=GS A0A3M6K0X8/5-52  DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus sp.; 
#=GS Q469M4/3-50      AC Q469M4
#=GS Q469M4/3-50      OS Methanosarcina barkeri str. Fusaro
#=GS Q469M4/3-50      DE Exosome complex component Rrp4
#=GS Q469M4/3-50      DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina barkeri; 
#=GS A0A0E3WSV1/3-50  AC A0A0E3WSV1
#=GS A0A0E3WSV1/3-50  OS Methanosarcina lacustris Z-7289
#=GS A0A0E3WSV1/3-50  DE Exosome complex component Rrp4
#=GS A0A0E3WSV1/3-50  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina lacustris; 
#=GS A0A1E7GAC2/3-50  AC A0A1E7GAC2
#=GS A0A1E7GAC2/3-50  OS Methanosarcina sp. Ant1
#=GS A0A1E7GAC2/3-50  DE Exosome complex component Rrp4
#=GS A0A1E7GAC2/3-50  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. Ant1; 
#=GS A0A0E3QMD7/3-50  AC A0A0E3QMD7
#=GS A0A0E3QMD7/3-50  OS Methanosarcina barkeri str. Wiesmoor
#=GS A0A0E3QMD7/3-50  DE Exosome complex component Rrp4
#=GS A0A0E3QMD7/3-50  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina barkeri; 
#=GS A0A0E3SJ00/3-50  AC A0A0E3SJ00
#=GS A0A0E3SJ00/3-50  OS Methanosarcina barkeri 3
#=GS A0A0E3SJ00/3-50  DE Exosome complex component Rrp4
#=GS A0A0E3SJ00/3-50  DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina barkeri; 
#=GS A0A371QWJ1/1-55  AC A0A371QWJ1
#=GS A0A371QWJ1/1-55  OS Pyrobaculum aerophilum
#=GS A0A371QWJ1/1-55  DE Exosome complex component Rrp4
#=GS A0A371QWJ1/1-55  DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; 
#=GF SQ 13
B1L6N8/1-59              MSEVTLLVRDKEVVIPGQPLARGKVKPGKDVYVDESGTIRSKKLGLVSLKDDEISIVPL-
Q8TPX7/3-50              ----------KKIVIPGDLLSENQKKAGYGTYV-KNDKIYSSLCGIENLKEDKVGVIPL-
Q8ZVM8/1-55              MY----YVTPRQLVFPGDVIATADSKVEGPVYL-DNGKYRSLVVGLVEFREDVVVVVPLE
Q5JIR5/1-57              MKK--IFVKPRELVVPGTLLAQGPFKNGRGTFR-EGNAIYSTVIGLVEIRGNVIRVIPLE
A9A5C8/5-52              ----------RKYVIPGDVVTTGPFRPEQNTVL-EGNKIISTTIGISEIYDDSVRVIPL-
I3D054/5-52              ----------RKYVIPGDVVTTGPFRPEQNVIL-EGNKIISTTIGISEIYDDSVKVIPL-
A0A3M6K0X8/5-52          ----------RKYVIPGDVVTTGPFRPEQNTVL-EGNKIISTTIGISEIYDDSVRVIPL-
Q469M4/3-50              ----------KKIVIPGDLISENSKKAGYGTYV-KNDKIYSLFCGIENLKEDKVGVIPL-
A0A0E3WSV1/3-50          ----------KKIVIPGDLLSENIKKAGYGTYI-KNNKIYSSFCGIENLKEDKVGVIPL-
A0A1E7GAC2/3-50          ----------KKIVIPGDLLSENTRKAGYGTYV-KNSKIYSSFCGIENLKEDKVGVIPL-
A0A0E3QMD7/3-50          ----------KKIVIPGDLISENSKKAGYGTYV-KNDKIYSLFCGIENLKEDKVGVIPL-
A0A0E3SJ00/3-50          ----------KKIVIPGDLLSENSKKAGYGTYV-KNDKIYSLFCGIENLKEDKVGVIPL-
A0A371QWJ1/1-55          MY----YVTPRQLVFPGDVIATADSKVEGPVYL-DNGKYRSLVVGLVEFREDVVVVVPLE
#=GC scorecons           100000010075496996555443374634555055466393349645546837387990
#=GC scorecons_70        __________*__*****_______*___________**_*___**____**_*_****_
#=GC scorecons_80        _____________*_**________*______________*___*______*_*_****_
#=GC scorecons_90        _____________*_**_______________________*___*__________*_**_
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