# STOCKHOLM 1.0
#=GF ID 2.40.30.300/FF/000005
#=GF DE Putative ATP-dependent RNA helicase
#=GF AC 2.40.30.300/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 90.199
#=GS O13799/644-760      AC O13799
#=GS O13799/644-760      OS Schizosaccharomyces pombe 972h-
#=GS O13799/644-760      DE Uncharacterized helicase C17H9.02
#=GS O13799/644-760      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O13799/644-760      DR GO; GO:0003724; GO:0005515; GO:0005634; GO:0005730; GO:0006364; GO:0016078; GO:0016604; GO:0032210; GO:0033621; GO:0043144; GO:0043630; GO:0071049; GO:1902801; GO:1902802; GO:1990342; GO:1990345; GO:1990477; 
#=GS Q38AL9/562-676      AC Q38AL9
#=GS Q38AL9/562-676      OS Trypanosoma brucei brucei TREU927
#=GS Q38AL9/562-676      DE ATP-dependent DEAD/H RNA helicase, putative
#=GS Q38AL9/562-676      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38AL9/562-676      DR GO; GO:0004386; GO:0005524; GO:0005634; GO:0005654; GO:0006364; 
#=GS Q4Q1B9/575-694      AC Q4Q1B9
#=GS Q4Q1B9/575-694      OS Leishmania major
#=GS Q4Q1B9/575-694      DE Putative ATP-dependent RNA helicase
#=GS Q4Q1B9/575-694      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q1B9/575-694      DR GO; GO:0005654; 
#=GS H3EK06/188-320      AC H3EK06
#=GS H3EK06/188-320      OS Pristionchus pacificus
#=GS H3EK06/188-320      DE Uncharacterized protein
#=GS H3EK06/188-320      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0C223/140-250      AC A0C223
#=GS A0C223/140-250      OS Paramecium tetraurelia
#=GS A0C223/140-250      DE Uncharacterized protein
#=GS A0C223/140-250      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A0A1G4IJC6/562-676  AC A0A1G4IJC6
#=GS A0A1G4IJC6/562-676  OS Trypanosoma equiperdum
#=GS A0A1G4IJC6/562-676  DE MTR4
#=GS A0A1G4IJC6/562-676  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A3S7XB63/561-680  AC A0A3S7XB63
#=GS A0A3S7XB63/561-680  OS Leishmania donovani
#=GS A0A3S7XB63/561-680  DE ATP-dependent RNA helicase, putative
#=GS A0A3S7XB63/561-680  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9AT78/561-680      AC E9AT78
#=GS E9AT78/561-680      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AT78/561-680      DE Putative ATP-dependent RNA helicase
#=GS E9AT78/561-680      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A4ID88/561-680      AC A4ID88
#=GS A4ID88/561-680      OS Leishmania infantum
#=GS A4ID88/561-680      DE Putative ATP-dependent RNA helicase
#=GS A4ID88/561-680      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9BU24/561-680      AC E9BU24
#=GS E9BU24/561-680      OS Leishmania donovani BPK282A1
#=GS E9BU24/561-680      DE ATP-dependent RNA helicase, putative
#=GS E9BU24/561-680      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0DE61/589-691      AC A0DE61
#=GS A0DE61/589-691      OS Paramecium tetraurelia
#=GS A0DE61/589-691      DE Uncharacterized protein
#=GS A0DE61/589-691      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GF SQ 11
O13799/644-760              -------IQIKLGGIIFPWGVLVNVIKREF-DPNTREQVAPHETYVLDVLL---PISSNSMSNH-KVNPSI------------LVPPRPNETPLYEIVSVLLTAVCNISSIRIYMPRELNSNESKLRAYRRVNEVIEEFKE
Q38AL9/562-676              -----LRIRRSTDGALFNWGICRSSRAKTS-NADEKDPS----SFSVDALV---ICRKADPSQPTQLVPCH-------------VKDHTINTADLYTVTFDFTDIEAVSRFRVNLPADLDSASSRAEVIQSLEKLYKNHGD
Q4Q1B9/575-694              QAGRFVHIIRASDQRDFGWGICRSFAAKST-NPNFSDPS----TFSIQAAV---ICMKADASNPSALTPCP-------------VSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPENPDSERGRAEVVQILSKLQRQFGH
H3EK06/188-320              HPG--RLFKIKTGSRDFGWGVLIKHHRKV--NPEDAHEM----VYVLDMLIALDPSSAADVSNPGSLKPPQQGGKDLSFNAGSLKPPQPGGKAVWELVPMTIECVDDISAVRLKLPTELTSREARDQVARMVKEVFARHPV
A0C223/140-250              ------IIRIKGSDGDWGWGISINFMQKKFGNKKNKDQE---QSIILDVML---YVQ-KRKKNE-PLQPQL----------------SLDQEGEFEIVPVSIEQLYEISTIKLNLPKDLRTNESKQQIKQTMIKLLKEFKG
A0A1G4IJC6/562-676          -----LRIRRSTDGALFNWGICRSSRAKTS-NADEKDPS----SFSVDALV---ICRKADPSQPTQLVPCH-------------VKDHTINTADLYTVTFDFTDIEAVSRFRVNLPADLDSASSRAEVIQSLEKLYKNHGD
A0A3S7XB63/561-680          QAGRFVHIIRASDQRDFGWGICRSFAAKST-NPNFSDPS----TFSIQAAV---ICMKADASNPSALTPCP-------------VSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPESPDSERGRAEVVQILSKLQRQFGH
E9AT78/561-680              QTGRFVHIVRASDQLDFGWGVCRSFAAKST-NPNFSDPS----TFSIQAAV---ICMKADASNPSALTPCP-------------VSEYTSEKADLYTVTFDFSDVQSLSTLKTNLPENPDSERGRAEVVQILSKLQRQFGN
A4ID88/561-680              QAGRFVHIIRASDQRDFGWGICRSFAAKST-NPNFSDPS----TFSIQAAV---ICMKADASNPSALTPCP-------------VSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPESPDSERGRAEVVQILSKLQRQFGH
E9BU24/561-680              QAGRFVHIIRASDQRDFGWGICRSFAAKST-NPNFSDPS----TFSIQAAV---ICMKADASNPSALTPCP-------------VSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPESPDSERGRAEVVQILSKLQRQFGH
A0DE61/589-691              -----RIIRIKGSDGDWGWGIQINFMQKKFGNKKNKDQE---QSIILDVML---YTYLDNIKNE-PLQPQL----------------SYDQEGELEI----------ISTIKLNLPKDLRTNESKQQIKQTMIKLLKEFKG
#=GC scorecons              111002273444543465997345434833074534654000055456546000343355367523739430000000000000322343445454564434335225955746793464644574563635366354643
#=GC scorecons_70           _______*________*_***______*___*____*________________________**___*_*____________________________*__________*__*__**____*___*__*_*___**______
#=GC scorecons_80           _______*__________***______*___*__________________________________*_*_______________________________________*_____**_________________________
#=GC scorecons_90           __________________**_______*________________________________________*_______________________________________*______*_________________________
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