# STOCKHOLM 1.0 #=GF ID 2.40.30.270/FF/000005 #=GF DE Probable RNA helicase SDE3 #=GF AC 2.40.30.270/FF/000005 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 87.823 #=GS Q6J5K9/581-637 AC Q6J5K9 #=GS Q6J5K9/581-637 OS Drosophila melanogaster #=GS Q6J5K9/581-637 DE Probable RNA helicase armi #=GS Q6J5K9/581-637 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q6J5K9/581-637 DR GO; GO:0000184; GO:0000578; GO:0003678; GO:0005515; GO:0005737; GO:0005739; GO:0005829; GO:0007293; GO:0007318; GO:0007616; GO:0016246; GO:0030424; GO:0030425; GO:0031023; GO:0043025; GO:0043186; GO:0045202; GO:0046843; GO:0048477; GO:0070725; GO:1990511; GO:2000002; #=GS Q6J5K9/581-637 DR EC; 3.6.4.13; #=GS Q8GYD9/294-350 AC Q8GYD9 #=GS Q8GYD9/294-350 OS Arabidopsis thaliana #=GS Q8GYD9/294-350 DE Probable RNA helicase SDE3 #=GS Q8GYD9/294-350 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q8GYD9/294-350 DR GO; GO:0003724; GO:0005515; GO:0009616; GO:0035194; #=GS Q8GYD9/294-350 DR EC; 3.6.4.13; #=GS M9NDG7/547-603 AC M9NDG7 #=GS M9NDG7/547-603 OS Drosophila melanogaster #=GS M9NDG7/547-603 DE Armitage, isoform C #=GS M9NDG7/547-603 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS A0A1P8AMM9/294-350 AC A0A1P8AMM9 #=GS A0A1P8AMM9/294-350 OS Arabidopsis thaliana #=GS A0A1P8AMM9/294-350 DE p-loop containing nucleoside triphosphate hydrolases superfamily protein #=GS A0A1P8AMM9/294-350 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q10RG1/295-344 AC Q10RG1 #=GS Q10RG1/295-344 OS Oryza sativa Japonica Group #=GS Q10RG1/295-344 DE Os03g0160400 protein #=GS Q10RG1/295-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS I1H9H7/292-342 AC I1H9H7 #=GS I1H9H7/292-342 OS Brachypodium distachyon #=GS I1H9H7/292-342 DE Uncharacterized protein #=GS I1H9H7/292-342 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A1D6JP79/294-344 AC A0A1D6JP79 #=GS A0A1D6JP79/294-344 OS Zea mays #=GS A0A1D6JP79/294-344 DE Putative RNA helicase SDE3 #=GS A0A1D6JP79/294-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS N1QQ42/295-345 AC N1QQ42 #=GS N1QQ42/295-345 OS Aegilops tauschii #=GS N1QQ42/295-345 DE Uncharacterized protein #=GS N1QQ42/295-345 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; #=GS A0A0D3FE30/334-383 AC A0A0D3FE30 #=GS A0A0D3FE30/334-383 OS Oryza barthii #=GS A0A0D3FE30/334-383 DE Uncharacterized protein #=GS A0A0D3FE30/334-383 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0CVH6/295-344 AC A0A0E0CVH6 #=GS A0A0E0CVH6/295-344 OS Oryza meridionalis #=GS A0A0E0CVH6/295-344 DE Uncharacterized protein #=GS A0A0E0CVH6/295-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0D9Z2C8/382-431 AC A0A0D9Z2C8 #=GS A0A0D9Z2C8/382-431 OS Oryza glumipatula #=GS A0A0D9Z2C8/382-431 DE Uncharacterized protein #=GS A0A0D9Z2C8/382-431 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS I1P7T4/295-344 AC I1P7T4 #=GS I1P7T4/295-344 OS Oryza glaberrima #=GS I1P7T4/295-344 DE Uncharacterized protein #=GS I1P7T4/295-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS J3LK82/297-344 AC J3LK82 #=GS J3LK82/297-344 OS Oryza brachyantha #=GS J3LK82/297-344 DE Uncharacterized protein #=GS J3LK82/297-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; #=GS A0A0E0NPZ3/339-388 AC A0A0E0NPZ3 #=GS A0A0E0NPZ3/339-388 OS Oryza rufipogon #=GS A0A0E0NPZ3/339-388 DE Uncharacterized protein #=GS A0A0E0NPZ3/339-388 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0K917/295-344 AC A0A0E0K917 #=GS A0A0E0K917/295-344 OS Oryza punctata #=GS A0A0E0K917/295-344 DE Uncharacterized protein #=GS A0A0E0K917/295-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0GH34/382-431 AC A0A0E0GH34 #=GS A0A0E0GH34/382-431 OS Oryza sativa f. spontanea #=GS A0A0E0GH34/382-431 DE Uncharacterized protein #=GS A0A0E0GH34/382-431 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS B4HTS1/579-637 AC B4HTS1 #=GS B4HTS1/579-637 OS Drosophila sechellia #=GS B4HTS1/579-637 DE GM14575 #=GS B4HTS1/579-637 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS A0A0J9RNQ1/579-637 AC A0A0J9RNQ1 #=GS A0A0J9RNQ1/579-637 OS Drosophila simulans #=GS A0A0J9RNQ1/579-637 DE Uncharacterized protein #=GS A0A0J9RNQ1/579-637 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS K7WS42/579-637 AC K7WS42 #=GS K7WS42/579-637 OS Drosophila simulans #=GS K7WS42/579-637 DE Armitage #=GS K7WS42/579-637 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS A0A2K2DV36/53-103 AC A0A2K2DV36 #=GS A0A2K2DV36/53-103 OS Brachypodium distachyon #=GS A0A2K2DV36/53-103 DE Uncharacterized protein #=GS A0A2K2DV36/53-103 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A0D9Z2C9/328-377 AC A0A0D9Z2C9 #=GS A0A0D9Z2C9/328-377 OS Oryza glumipatula #=GS A0A0D9Z2C9/328-377 DE Uncharacterized protein #=GS A0A0D9Z2C9/328-377 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A2XCS4/295-344 AC A2XCS4 #=GS A2XCS4/295-344 OS Oryza sativa Indica Group #=GS A2XCS4/295-344 DE Uncharacterized protein #=GS A2XCS4/295-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0E0GH35/328-377 AC A0A0E0GH35 #=GS A0A0E0GH35/328-377 OS Oryza sativa f. spontanea #=GS A0A0E0GH35/328-377 DE Uncharacterized protein #=GS A0A0E0GH35/328-377 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A317YB22/294-344 AC A0A317YB22 #=GS A0A317YB22/294-344 OS Zea mays #=GS A0A317YB22/294-344 DE Putative RNA helicase SDE3 #=GS A0A317YB22/294-344 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6PKB3/33-81 AC A0A1D6PKB3 #=GS A0A1D6PKB3/33-81 OS Zea mays #=GS A0A1D6PKB3/33-81 DE Putative RNA helicase SDE3 #=GS A0A1D6PKB3/33-81 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6PKB4/295-343 AC A0A1D6PKB4 #=GS A0A1D6PKB4/295-343 OS Zea mays #=GS A0A1D6PKB4/295-343 DE Putative RNA helicase SDE3 #=GS A0A1D6PKB4/295-343 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS C0P7X4/295-343 AC C0P7X4 #=GS C0P7X4/295-343 OS Zea mays #=GS C0P7X4/295-343 DE Putative RNA helicase SDE3 #=GS C0P7X4/295-343 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6PKB6/294-343 AC A0A1D6PKB6 #=GS A0A1D6PKB6/294-343 OS Zea mays #=GS A0A1D6PKB6/294-343 DE Putative RNA helicase SDE3 #=GS A0A1D6PKB6/294-343 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 28 Q6J5K9/581-637 ---VIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSSFQEKYNGED-YRLEFY Q8GYD9/294-350 -SLVHGDFIFVRHAYDDG---TDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFT M9NDG7/547-603 ---VIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSSFQEKYNGED-YRLEFY A0A1P8AMM9/294-350 -SLVHGDFIFVRHAYDDG---TDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFT Q10RG1/295-344 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- I1H9H7/292-342 PSLVHGDFIVARHAGSDA-----RPYQGFIHKVEADEIFLRFDVQFHHSHHDRNKY----- A0A1D6JP79/294-344 PSLVQGDFVVARYAGNHA-----QAYQGFIHRVEADEIFLQFDHQFHMNHHDRNRY----- N1QQ42/295-345 PSLVHGDYIIARHAGSDA-----RPYQGYIHKVEADEIFLRFDDQFHHAHHDRNKY----- A0A0D3FE30/334-383 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- A0A0E0CVH6/295-344 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDWNQY----- A0A0D9Z2C8/382-431 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- I1P7T4/295-344 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- J3LK82/297-344 ---VHGDYIFARHAGSDV-----RPYQGFIHKVEADEIFLKFDSQFHLAHRDRNQY----- A0A0E0NPZ3/339-388 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- A0A0E0K917/295-344 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- A0A0E0GH34/382-431 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHHDRNQY----- B4HTS1/579-637 -SLVIGDTVRVINPWSDPNSGTTKSYEGIIHKVLFDRILLKFQSSFQEKYNGED-YRLEFY A0A0J9RNQ1/579-637 -SLVIGDTVRVINPWSDPNSGITKSYEGIIHKVLFDRILLKFQSSFQEKYNGED-YRLEFY K7WS42/579-637 -SLVIGDTVRVIXPWSDPNSGTTKSYEGIIHKVLFDRILLKFQSSFQEKYNGED-YRLEFY A0A2K2DV36/53-103 PSLVHGDFIVARHAGSDA-----RPYQGFIHKVEADEIFLRFDVQFHHSHHDRNKY----- A0A0D9Z2C9/328-377 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- A2XCS4/295-344 -SLVHGDFIVVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQY----- A0A0E0GH35/328-377 -SLVHGDFIFVRHAGSDA-----RPYQGFIHKVEADEIFLKFDNQFHLAHHDRNQY----- A0A317YB22/294-344 PSLVQGDFVVARYAGNHA-----QAYQGFIHRVEADEIFLQFDHQFHMNHHDRNRY----- A0A1D6PKB3/33-81 --LVQGDFIFARYAGNDS-----QPYQGFIHKVEADEIFLKFDHQFHMNHRERNQY----- A0A1D6PKB4/295-343 --LVQGDFIFARYAGNDS-----QPYQGFIHKVEADEIFLKFDHQFHMNHRERNQY----- C0P7X4/295-343 --LVQGDFIFARYAGNDS-----QPYQGFIHKVEADEIFLKFDHQFHMNHRERNQY----- A0A1D6PKB6/294-343 -SLVQGDFIFARYAGNDS-----QPYQGFIHKVEADEIFLKFDHQFHMNHRERNQY----- #=GC scorecons 0469499564655646840001055969689795596858795459734745562911110 #=GC scorecons_70 __**_**_*_*__*_**________***_****__*_*_***___**__*_____*_____ #=GC scorecons_80 ___*_**_________*________*_*_****__*_*_***___*___*_____*_____ #=GC scorecons_90 ___*_**_________*________*_*_**_*__*_*_*_*___*_________*_____ //