# STOCKHOLM 1.0
#=GF ID 2.30.42.10/FF/000228
#=GF DE Rab3 interacting molecule, isoform R
#=GF AC 2.30.42.10/FF/000228
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 53.206
#=GS Q22366/620-735      AC Q22366
#=GS Q22366/620-735      OS Caenorhabditis elegans
#=GS Q22366/620-735      DE Rab-3-interacting molecule unc-10
#=GS Q22366/620-735      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q22366/620-735      DR GO; GO:0007271; GO:0007617; GO:0007626; GO:0008022; GO:0008104; GO:0016082; GO:0017137; GO:0030421; GO:0030424; GO:0032224; GO:0040011; GO:0040018; GO:0043051; GO:0045202; GO:0048786; GO:0050806; 
#=GS Q9VEE5/788-925      AC Q9VEE5
#=GS Q9VEE5/788-925      OS Drosophila melanogaster
#=GS Q9VEE5/788-925      DE Rab3 interacting molecule, isoform Q
#=GS Q9VEE5/788-925      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VEE5/788-925      DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0017156; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K6M2/788-925  AC A0A0B4K6M2
#=GS A0A0B4K6M2/788-925  OS Drosophila melanogaster
#=GS A0A0B4K6M2/788-925  DE Rab3 interacting molecule, isoform F
#=GS A0A0B4K6M2/788-925  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K6M2/788-925  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0048788; GO:0070073; 
#=GS A0A0B4K677/484-615  AC A0A0B4K677
#=GS A0A0B4K677/484-615  OS Drosophila melanogaster
#=GS A0A0B4K677/484-615  DE Rab3 interacting molecule, isoform Y
#=GS A0A0B4K677/484-615  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K677/484-615  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K742/788-925  AC A0A0B4K742
#=GS A0A0B4K742/788-925  OS Drosophila melanogaster
#=GS A0A0B4K742/788-925  DE Rab3 interacting molecule, isoform W
#=GS A0A0B4K742/788-925  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K742/788-925  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K7E7/788-925  AC A0A0B4K7E7
#=GS A0A0B4K7E7/788-925  OS Drosophila melanogaster
#=GS A0A0B4K7E7/788-925  DE Rab3 interacting molecule, isoform R
#=GS A0A0B4K7E7/788-925  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K7E7/788-925  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K7E1/788-925  AC A0A0B4K7E1
#=GS A0A0B4K7E1/788-925  OS Drosophila melanogaster
#=GS A0A0B4K7E1/788-925  DE Rab3 interacting molecule, isoform U
#=GS A0A0B4K7E1/788-925  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K7E1/788-925  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K6B7/484-615  AC A0A0B4K6B7
#=GS A0A0B4K6B7/484-615  OS Drosophila melanogaster
#=GS A0A0B4K6B7/484-615  DE Rab3 interacting molecule, isoform Z
#=GS A0A0B4K6B7/484-615  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K6B7/484-615  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K679/788-925  AC A0A0B4K679
#=GS A0A0B4K679/788-925  OS Drosophila melanogaster
#=GS A0A0B4K679/788-925  DE Rab3 interacting molecule, isoform V
#=GS A0A0B4K679/788-925  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K679/788-925  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K6B1/788-925  AC A0A0B4K6B1
#=GS A0A0B4K6B1/788-925  OS Drosophila melanogaster
#=GS A0A0B4K6B1/788-925  DE Rab3 interacting molecule, isoform P
#=GS A0A0B4K6B1/788-925  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K6B1/788-925  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS A0A0B4K6L8/484-615  AC A0A0B4K6L8
#=GS A0A0B4K6L8/484-615  OS Drosophila melanogaster
#=GS A0A0B4K6L8/484-615  DE Rab3 interacting molecule, isoform T
#=GS A0A0B4K6L8/484-615  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4K6L8/484-615  DR GO; GO:0007269; GO:0007274; GO:0008021; GO:0016079; GO:0016192; GO:0048167; GO:0048786; GO:0070073; 
#=GS V5M2P5/484-615      AC V5M2P5
#=GS V5M2P5/484-615      OS Drosophila melanogaster
#=GS V5M2P5/484-615      DE Rab3 interacting molecule variant 2
#=GS V5M2P5/484-615      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS E3LD22/620-751      AC E3LD22
#=GS E3LD22/620-751      OS Caenorhabditis remanei
#=GS E3LD22/620-751      DE CRE-UNC-10 protein
#=GS E3LD22/620-751      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A8XC13/635-769      AC A8XC13
#=GS A8XC13/635-769      OS Caenorhabditis briggsae
#=GS A8XC13/635-769      DE Protein CBR-UNC-10
#=GS A8XC13/635-769      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A261CRD4/608-723  AC A0A261CRD4
#=GS A0A261CRD4/608-723  OS Caenorhabditis latens
#=GS A0A261CRD4/608-723  DE Uncharacterized protein
#=GS A0A261CRD4/608-723  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS G0N502/688-802      AC G0N502
#=GS G0N502/688-802      OS Caenorhabditis brenneri
#=GS G0N502/688-802      DE CBN-UNC-10 protein
#=GS G0N502/688-802      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A2H2IJ06/614-731  AC A0A2H2IJ06
#=GS A0A2H2IJ06/614-731  OS Caenorhabditis japonica
#=GS A0A2H2IJ06/614-731  DE Uncharacterized protein
#=GS A0A2H2IJ06/614-731  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A2G5SV85/607-723  AC A0A2G5SV85
#=GS A0A2G5SV85/607-723  OS Caenorhabditis nigoni
#=GS A0A2G5SV85/607-723  DE Uncharacterized protein
#=GS A0A2G5SV85/607-723  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5SW33/607-723  AC A0A2G5SW33
#=GS A0A2G5SW33/607-723  OS Caenorhabditis nigoni
#=GS A0A2G5SW33/607-723  DE Uncharacterized protein
#=GS A0A2G5SW33/607-723  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261BDL7/620-735  AC A0A261BDL7
#=GS A0A261BDL7/620-735  OS Caenorhabditis remanei
#=GS A0A261BDL7/620-735  DE Uncharacterized protein
#=GS A0A261BDL7/620-735  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 20
Q22366/620-735              ------RIRTFLSHPVTWQPSADQKKLIGHMILHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRP-------------------GDEVVEWNGQSLQNATYEQVYDSIAASRYDTSVELIVSR--SA
Q9VEE5/788-925              TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K6M2/788-925          TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K677/484-615          ------DLQIHANNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K742/788-925          TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K7E7/788-925          TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K7E1/788-925          TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K6B7/484-615          ------DLQIHANNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K679/788-925          TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K6B1/788-925          TSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
A0A0B4K6L8/484-615          ------DLQIHANNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
V5M2P5/484-615              ------DLQIHANNPVNWQTSADNTRLIGHMILRKYYD--GEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRP-------------------GDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGS
E3LD22/620-751              ------RIRTFLSHPVTWQPSADQKRLIGHMILHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRPGNEFFNEIHFS---LFLFLGDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDLIVSR--NA
A8XC13/635-769              ------RIRTILAHPVTWQPTSDQKRLIGHMVLHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRPGNEFFNEIPFTSMFYFCFSGDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDMIVSR--NA
A0A261CRD4/608-723          ------RIRTFLSHPVTWQPSADQKRLIGHMILHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRP-------------------GDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDLIVSR--NA
G0N502/688-802              -------IRTFLSHPVTWQPSADQKRLIGHMVLHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRP-------------------GDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDLIVSR--NA
A0A2H2IJ06/614-731          A----SRIRTFLSHPVTWQPSADQKRLIGHMILHRTENSASNGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRP-------------------ADEVVEWNGQSLQNATYEQVYDSIAASRYDTSVELIVSR--SA
A0A2G5SV85/607-723          -----SRIRTILAHPVTWQPTSDQKRLIGHMVLHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRP-------------------GDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDMIVSR--NA
A0A2G5SW33/607-723          -----SRIRTILAHPVTWQPTSDQKRLIGHMVLHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKPGSVADTIGRLRP-------------------GDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDMIVSR--NA
A0A261BDL7/620-735          ------RIRTFLSHPVTWQPSADQKRLIGHMILHRTENSAANGDLGLKIVGGRRTDT----------------GKLGAFITQVKSGSVADTIGRLRP-------------------GDEVVEWNGQSLQNATYEQVYDSIAASRYDTQVDLIVSR--NA
#=GC scorecons              000001445435469969967795589999979674462256649999759965559222222222222222295499575699599999549969900000000000000000008997699996696956476999595599596797799992256
#=GC scorecons_70           ______________**_**_***__**********__*______*****_***___*________________*__**_*_***_*****__*****___________________**********_***___*****_*__**_**********____
#=GC scorecons_80           ______________**_**_***__********___________****__**____*________________*__**____**_*****__**_**___________________***__****__*_*_____***_*__**_*_**_*****____
#=GC scorecons_90           ______________**_**___*__******_*___________****__**____*________________*__**____**_*****__**_**___________________***__****__*_*_____***_*__**_*__*__****____
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