# STOCKHOLM 1.0 #=GF ID 2.30.30.30/FF/000053 #=GF DE Protein RNA-directed DNA methylation 3 #=GF AC 2.30.30.30/FF/000053 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 94.538 #=GS F4JW79/594-661 AC F4JW79 #=GS F4JW79/594-661 OS Arabidopsis thaliana #=GS F4JW79/594-661 DE Protein RNA-directed DNA methylation 3 #=GS F4JW79/594-661 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F4JW79/594-661 DR GO; GO:0003682; GO:0003723; GO:0005515; GO:0005654; GO:0006306; GO:0006342; GO:0016458; GO:0030422; GO:0080188; #=GS A0A1P8BFP7/594-661 AC A0A1P8BFP7 #=GS A0A1P8BFP7/594-661 OS Arabidopsis thaliana #=GS A0A1P8BFP7/594-661 DE Kow domain-containing transcription factor 1 #=GS A0A1P8BFP7/594-661 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F6HNC9/501-569 AC F6HNC9 #=GS F6HNC9/501-569 OS Vitis vinifera #=GS F6HNC9/501-569 DE Uncharacterized protein #=GS F6HNC9/501-569 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A0D4Q4/698-754 AC A0D4Q4 #=GS A0D4Q4/698-754 OS Paramecium tetraurelia #=GS A0D4Q4/698-754 DE Uncharacterized protein #=GS A0D4Q4/698-754 DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; #=GS A2ED41/641-703 AC A2ED41 #=GS A2ED41/641-703 OS Trichomonas vaginalis #=GS A2ED41/641-703 DE KOW motif family protein #=GS A2ED41/641-703 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS A0A1D6FT60/430-500 AC A0A1D6FT60 #=GS A0A1D6FT60/430-500 OS Zea mays #=GS A0A1D6FT60/430-500 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6FT60/430-500 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A067KF58/554-622 AC A0A067KF58 #=GS A0A067KF58/554-622 OS Jatropha curcas #=GS A0A067KF58/554-622 DE Uncharacterized protein #=GS A0A067KF58/554-622 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha; Jatropha curcas; #=GS A0A078HVK6/562-627 AC A0A078HVK6 #=GS A0A078HVK6/562-627 OS Brassica napus #=GS A0A078HVK6/562-627 DE BnaCnng10200D protein #=GS A0A078HVK6/562-627 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A087G4S8/581-647 AC A0A087G4S8 #=GS A0A087G4S8/581-647 OS Arabis alpina #=GS A0A087G4S8/581-647 DE Uncharacterized protein #=GS A0A087G4S8/581-647 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS A0A3L6T3M6/541-611 AC A0A3L6T3M6 #=GS A0A3L6T3M6/541-611 OS Panicum miliaceum #=GS A0A3L6T3M6/541-611 DE Uncharacterized protein #=GS A0A3L6T3M6/541-611 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A1Z5R3E8/584-652 AC A0A1Z5R3E8 #=GS A0A1Z5R3E8/584-652 OS Sorghum bicolor #=GS A0A1Z5R3E8/584-652 DE Uncharacterized protein #=GS A0A1Z5R3E8/584-652 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A1D6FT45/579-649 AC A0A1D6FT45 #=GS A0A1D6FT45/579-649 OS Zea mays #=GS A0A1D6FT45/579-649 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6FT45/579-649 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6FT54/430-500 AC A0A1D6FT54 #=GS A0A1D6FT54/430-500 OS Zea mays #=GS A0A1D6FT54/430-500 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6FT54/430-500 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6M7N6/554-622 AC A0A1D6M7N6 #=GS A0A1D6M7N6/554-622 OS Zea mays #=GS A0A1D6M7N6/554-622 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6M7N6/554-622 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6M7N3/532-600 AC A0A1D6M7N3 #=GS A0A1D6M7N3/532-600 OS Zea mays #=GS A0A1D6M7N3/532-600 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6M7N3/532-600 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6M7N4/554-622 AC A0A1D6M7N4 #=GS A0A1D6M7N4/554-622 OS Zea mays #=GS A0A1D6M7N4/554-622 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6M7N4/554-622 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6FT64/579-649 AC A0A1D6FT64 #=GS A0A1D6FT64/579-649 OS Zea mays #=GS A0A1D6FT64/579-649 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6FT64/579-649 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6FT50/579-649 AC A0A1D6FT50 #=GS A0A1D6FT50/579-649 OS Zea mays #=GS A0A1D6FT50/579-649 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6FT50/579-649 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6M7P9/432-500 AC A0A1D6M7P9 #=GS A0A1D6M7P9/432-500 OS Zea mays #=GS A0A1D6M7P9/432-500 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6M7P9/432-500 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6M7N5/582-650 AC A0A1D6M7N5 #=GS A0A1D6M7N5/582-650 OS Zea mays #=GS A0A1D6M7N5/582-650 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6M7N5/582-650 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7V170/551-621 AC K7V170 #=GS K7V170/551-621 OS Zea mays #=GS K7V170/551-621 DE Protein RNA-directed DNA methylation 3 #=GS K7V170/551-621 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6M7N2/582-650 AC A0A1D6M7N2 #=GS A0A1D6M7N2/582-650 OS Zea mays #=GS A0A1D6M7N2/582-650 DE Protein RNA-directed DNA methylation 3 #=GS A0A1D6M7N2/582-650 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 22 F4JW79/594-661 ----ERYNSSNQGDIGSTYSIGQKLRIRVGPLKGYLCRVIALRYSDVTVKLDSQHKIFTVKSEHLAEVRDRN A0A1P8BFP7/594-661 ----ERYNSSNQGDIGSTYSIGQKLRIRVGPLKGYLCRVIALRYSDVTVKLDSQHKIFTVKSEHLAEVRDRN F6HNC9/501-569 --ARENNRDFNRGDKDGMFSVGQTLRIRVGPLKGYLCRVLAIRYSDVTVKLDSQHKVLTVKCEHLSEVRGK- A0D4Q4/698-754 -----------MPNEDWKNLRGQMVTIRKGQWQSYRGMVQEVTSRVATIQLSAKNLVVKVPLECIKSE---- A2ED41/641-703 --SAGSGGFVIQRPKQDLSLKGQTIKIIKGPYKGLLADVKEATGEDMHVILHTTKKIVRLFRTNG------- A0A1D6FT60/430-500 QNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A067KF58/554-622 --TRESNRDFNQGDKDGMFSIGQTLRIRVGPLKGYLCRVLAIRYSDVTVKLDSQQKVLTVKREHLSEVRGK- A0A078HVK6/562-627 ------YINSNQGDKGSMYSIGQKLRIRVGPLKGYLCRVIGLRYSDITVKLDSQHKIFTVKSEHLAEVRDRN A0A087G4S8/581-647 -----KYNNSNQGEKGSMYSIGQKLRIRVGPLKGYLCRVIALRYSDVTVKLDSQHKIFTVKSEHLAEVRDRN A0A3L6T3M6/541-611 QNEHRGTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPANR- A0A1Z5R3E8/584-652 --EHRDTERPYRSTREQLFSVGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKTVTVQADLLSVPANR- A0A1D6FT45/579-649 QNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6FT54/430-500 QNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6M7N6/554-622 --EHRNTEGPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6M7N3/532-600 --EHRNTEGPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6M7N4/554-622 --EHRNTEGPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6FT64/579-649 QNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6FT50/579-649 QNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6M7P9/432-500 --EHRNTEGPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6M7N5/582-650 --EHRNTEGPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- K7V170/551-621 QNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- A0A1D6M7N2/582-650 --EHRNTEGPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANR- #=GC scorecons 001232332335445535565994779759768777669445344767869674477668446464333350 #=GC scorecons_70 ___________________*_**_****_**********______********__**_**____*_______ #=GC scorecons_80 _____________________**_*_**_**_****__*______*_**_*____**__*____________ #=GC scorecons_90 _____________________**___*__*________*_________*_*_____________________ //