# STOCKHOLM 1.0
#=GF ID 2.20.70.10/FF/000099
#=GF DE E3 ubiquitin-protein ligase NEDD4
#=GF AC 2.20.70.10/FF/000099
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 42.656
#=GS A0A2I0M714/741-782  AC A0A2I0M714
#=GS A0A2I0M714/741-782  OS Columba livia
#=GS A0A2I0M714/741-782  DE Neural cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, transcript variant X1
#=GS A0A2I0M714/741-782  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Columbiformes; Columbidae; Columba; Columba livia; 
#=GS A0A151M9R4/337-378  AC A0A151M9R4
#=GS A0A151M9R4/337-378  OS Alligator mississippiensis
#=GS A0A151M9R4/337-378  DE E3 ubiquitin-protein ligase
#=GS A0A151M9R4/337-378  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator mississippiensis; 
#=GS K7GAX2/746-785      AC K7GAX2
#=GS K7GAX2/746-785      OS Pelodiscus sinensis
#=GS K7GAX2/746-785      DE Uncharacterized protein
#=GS K7GAX2/746-785      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus; Pelodiscus sinensis; 
#=GS F6VTL6/303-336      AC F6VTL6
#=GS F6VTL6/303-336      OS Ornithorhynchus anatinus
#=GS F6VTL6/303-336      DE E3 ubiquitin-protein ligase
#=GS F6VTL6/303-336      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GS F6ST62/375-409      AC F6ST62
#=GS F6ST62/375-409      OS Xenopus tropicalis
#=GS F6ST62/375-409      DE Neural precursor cell-expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
#=GS F6ST62/375-409      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A0A093HPX8/329-368  AC A0A093HPX8
#=GS A0A093HPX8/329-368  OS Struthio camelus australis
#=GS A0A093HPX8/329-368  DE E3 ubiquitin-protein ligase NEDD4
#=GS A0A093HPX8/329-368  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio; Struthio camelus; Struthio camelus australis; 
#=GS G3VRS9/718-750      AC G3VRS9
#=GS G3VRS9/718-750      OS Sarcophilus harrisii
#=GS G3VRS9/718-750      DE Neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
#=GS G3VRS9/718-750      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Dasyuromorphia; Dasyuridae; Sarcophilus; Sarcophilus harrisii; 
#=GS A0A1D5PIF5/342-383  AC A0A1D5PIF5
#=GS A0A1D5PIF5/342-383  OS Gallus gallus
#=GS A0A1D5PIF5/342-383  DE E3 ubiquitin-protein ligase
#=GS A0A1D5PIF5/342-383  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS A0A091WHJ7/327-368  AC A0A091WHJ7
#=GS A0A091WHJ7/327-368  OS Opisthocomus hoazin
#=GS A0A091WHJ7/327-368  DE E3 ubiquitin-protein ligase NEDD4
#=GS A0A091WHJ7/327-368  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Opisthocomiformes; Opisthocomidae; Opisthocomus; Opisthocomus hoazin; 
#=GS A0A087QPF2/328-369  AC A0A087QPF2
#=GS A0A087QPF2/328-369  OS Aptenodytes forsteri
#=GS A0A087QPF2/328-369  DE E3 ubiquitin-protein ligase NEDD4
#=GS A0A087QPF2/328-369  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes; Aptenodytes forsteri; 
#=GS A0A1V4JDH5/342-383  AC A0A1V4JDH5
#=GS A0A1V4JDH5/342-383  OS Patagioenas fasciata monilis
#=GS A0A1V4JDH5/342-383  DE E3 ubiquitin-protein ligase
#=GS A0A1V4JDH5/342-383  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas; Patagioenas fasciata; Patagioenas fasciata monilis; 
#=GS A0A3Q0G021/225-266  AC A0A3Q0G021
#=GS A0A3Q0G021/225-266  OS Alligator sinensis
#=GS A0A3Q0G021/225-266  DE E3 ubiquitin-protein ligase
#=GS A0A3Q0G021/225-266  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator sinensis; 
#=GS E1BWY8/372-413      AC E1BWY8
#=GS E1BWY8/372-413      OS Gallus gallus
#=GS E1BWY8/372-413      DE E3 ubiquitin-protein ligase
#=GS E1BWY8/372-413      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS A0A2I0M711/724-765  AC A0A2I0M711
#=GS A0A2I0M711/724-765  OS Columba livia
#=GS A0A2I0M711/724-765  DE Neural cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, transcript variant X2
#=GS A0A2I0M711/724-765  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Columbiformes; Columbidae; Columba; Columba livia; 
#=GS A0A1D5PHV0/342-383  AC A0A1D5PHV0
#=GS A0A1D5PHV0/342-383  OS Gallus gallus
#=GS A0A1D5PHV0/342-383  DE E3 ubiquitin-protein ligase
#=GS A0A1D5PHV0/342-383  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS A0A2I0M700/319-360  AC A0A2I0M700
#=GS A0A2I0M700/319-360  OS Columba livia
#=GS A0A2I0M700/319-360  DE Neural cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, transcript variant X4
#=GS A0A2I0M700/319-360  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Columbiformes; Columbidae; Columba; Columba livia; 
#=GS A0A3Q0G429/254-295  AC A0A3Q0G429
#=GS A0A3Q0G429/254-295  OS Alligator sinensis
#=GS A0A3Q0G429/254-295  DE E3 ubiquitin-protein ligase
#=GS A0A3Q0G429/254-295  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator sinensis; 
#=GS A0A1D5NVX3/348-389  AC A0A1D5NVX3
#=GS A0A1D5NVX3/348-389  OS Gallus gallus
#=GS A0A1D5NVX3/348-389  DE E3 ubiquitin-protein ligase
#=GS A0A1D5NVX3/348-389  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GF SQ 18
A0A2I0M714/741-782          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A151M9R4/337-378          --LLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQTT
K7GAX2/746-785              --LLPTSSGLPPGWEEKQDEKGRSYYIDHNSRTTTWIKPIVQ--
F6VTL6/303-336              ---------LPPGWEEKQDDKGRSYYIDHNSRTTTWMKPAIQA-
F6ST62/375-409              ---------LPPGWEEKHDDKGRSYYIDHNSRTTTWEKPSSQAQ
A0A093HPX8/329-368          --LLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
G3VRS9/718-750              ---------LPPGWEEKQDGKGRSYYIDHNSKTTTWMKPIIQ--
A0A1D5PIF5/342-383          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A091WHJ7/327-368          PVLLPTSSGLPAGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A087QPF2/328-369          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A1V4JDH5/342-383          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A3Q0G021/225-266          --LLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQTT
E1BWY8/372-413              PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A2I0M711/724-765          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A1D5PHV0/342-383          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A2I0M700/319-360          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
A0A3Q0G429/254-295          --LLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQTT
A0A1D5NVX3/348-389          PVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKPVVQ--
#=GC scorecons              11333333399899997796999999999998999959956900
#=GC scorecons_70           _________***************************_**__*__
#=GC scorecons_80           _________*******_**_****************_**__*__
#=GC scorecons_90           _________*******__*_****************_**__*__
//