# STOCKHOLM 1.0
#=GF ID 2.10.90.10/FF/000047
#=GF DE Left-right determination factor
#=GF AC 2.10.90.10/FF/000047
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 83.922
#=GS Q9W6I6/258-351      AC Q9W6I6
#=GS Q9W6I6/258-351      OS Danio rerio
#=GS Q9W6I6/258-351      DE Left-right determination factor
#=GS Q9W6I6/258-351      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q9W6I6/258-351      DR GO; GO:0003140; GO:0005515; GO:0007368; GO:0007498; GO:0009953; GO:0035050; GO:0035462; GO:0061371; 
#=GS Q9PW55/258-351      AC Q9PW55
#=GS Q9PW55/258-351      OS Danio rerio
#=GS Q9PW55/258-351      DE Left-right determination factor
#=GS Q9PW55/258-351      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q9PW55/258-351      DR GO; GO:0003140; GO:0007368; GO:0007498; GO:0009953; GO:0035050; GO:0035462; GO:0061371; 
#=GS Q9PVN4/251-351      AC Q9PVN4
#=GS Q9PVN4/251-351      OS Gallus gallus
#=GS Q9PVN4/251-351      DE Left-right determination factor
#=GS Q9PVN4/251-351      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS Q9PVN4/251-351      DR GO; GO:0001562; GO:0048536; GO:0048566; 
#=GS Q9W6I7/259-355      AC Q9W6I7
#=GS Q9W6I7/259-355      OS Danio rerio
#=GS Q9W6I7/259-355      DE Left-right determination factor
#=GS Q9W6I7/259-355      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q9W6I7/259-355      DR GO; GO:0003128; GO:0007498; 
#=GS W4YR16/364-479      AC W4YR16
#=GS W4YR16/364-479      OS Strongylocentrotus purpuratus
#=GS W4YR16/364-479      DE Uncharacterized protein
#=GS W4YR16/364-479      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4Y2H8/278-397      AC W4Y2H8
#=GS W4Y2H8/278-397      OS Strongylocentrotus purpuratus
#=GS W4Y2H8/278-397      DE Uncharacterized protein
#=GS W4Y2H8/278-397      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS F6X1A2/279-378      AC F6X1A2
#=GS F6X1A2/279-378      OS Ciona intestinalis
#=GS F6X1A2/279-378      DE Uncharacterized protein
#=GS F6X1A2/279-378      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS G1KEW2/253-354      AC G1KEW2
#=GS G1KEW2/253-354      OS Anolis carolinensis
#=GS G1KEW2/253-354      DE Left-right determination factor
#=GS G1KEW2/253-354      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS A0A1L8G109/148-248  AC A0A1L8G109
#=GS A0A1L8G109/148-248  OS Xenopus laevis
#=GS A0A1L8G109/148-248  DE Uncharacterized protein
#=GS A0A1L8G109/148-248  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS W5NGH2/260-357      AC W5NGH2
#=GS W5NGH2/260-357      OS Lepisosteus oculatus
#=GS W5NGH2/260-357      DE Left-right determination factor
#=GS W5NGH2/260-357      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS A0A226NMA2/285-383  AC A0A226NMA2
#=GS A0A226NMA2/285-383  OS Callipepla squamata
#=GS A0A226NMA2/285-383  DE Left-right determination factor
#=GS A0A226NMA2/285-383  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Callipepla; Callipepla squamata; 
#=GS A0A226P710/285-383  AC A0A226P710
#=GS A0A226P710/285-383  OS Colinus virginianus
#=GS A0A226P710/285-383  DE Left-right determination factor
#=GS A0A226P710/285-383  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Colinus; Colinus virginianus; 
#=GS B3DLA0/258-358      AC B3DLA0
#=GS B3DLA0/258-358      OS Xenopus tropicalis
#=GS B3DLA0/258-358      DE Left-right determination factor
#=GS B3DLA0/258-358      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS Q9PUK3/209-309      AC Q9PUK3
#=GS Q9PUK3/209-309      OS Gallus gallus
#=GS Q9PUK3/209-309      DE LEFTY-1 protein
#=GS Q9PUK3/209-309      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS Q9PUK3/209-309      DR GO; GO:0001562; GO:0048536; GO:0048566; 
#=GS F1QWZ9/259-355      AC F1QWZ9
#=GS F1QWZ9/259-355      OS Danio rerio
#=GS F1QWZ9/259-355      DE Left-right determination factor
#=GS F1QWZ9/259-355      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F1QWZ9/259-355      DR GO; GO:0003128; GO:0007498; 
#=GS A0A0B5JW28/259-355  AC A0A0B5JW28
#=GS A0A0B5JW28/259-355  OS Danio rerio
#=GS A0A0B5JW28/259-355  DE Lft2
#=GS A0A0B5JW28/259-355  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A0B5JW28/259-355  DR GO; GO:0003128; GO:0007498; 
#=GS A0A1D5PYT7/251-351  AC A0A1D5PYT7
#=GS A0A1D5PYT7/251-351  OS Gallus gallus
#=GS A0A1D5PYT7/251-351  DE Left-right determination factor
#=GS A0A1D5PYT7/251-351  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS Q9DFC6/260-359      AC Q9DFC6
#=GS Q9DFC6/260-359      OS Xenopus laevis
#=GS Q9DFC6/260-359      DE Left-right determination factor
#=GS Q9DFC6/260-359      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS F7EDG1/85-172       AC F7EDG1
#=GS F7EDG1/85-172       OS Xenopus tropicalis
#=GS F7EDG1/85-172       DE Left-right determination factor
#=GS F7EDG1/85-172       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GF SQ 19
Q9W6I6/258-351              -------NNKDREMCCREQY-FINFRALTWTQYWIIEPSGYQAFRCKGGCRQPK-------------------------RNYGYGERKCAVVESAPLPMMYLVK-KGDYTEIEVAEFPNMIVEKCGCA
Q9PW55/258-351              -------NNKDREMCCREQY-FINFRALTWTQYWIIEPSGYQAFRCKGGCRQPK-------------------------RNYGYGERKCAVVESAPLPMMYLVK-KGDYTEIEVAEFPNMIVEKCGCA
Q9PVN4/251-351              ---CKDGVQAGKSTCCRQKH-YINFRELSWTQYWVIEPAGYQAYSCRGGCLQLPG----------------------PLQLWGGRERACAVAESSPLPIMYLVR-RGNHTEIEATEFPNMIIEKCSCM
Q9W6I7/259-355              ---C--NSSPNSSKCCREEH-FINFRELTWTQYWIIEPAGYQAFRCAGGCKQPKR------------------------GFYGYGQRTCAVMESAPLPMMYLVK-KGDYTEIEVAEFPNMIVEKCGCS
W4YR16/364-479              -AQPKCGQYQQSDECCRRRNLTISFRELRFN--WILAPLEYNAHFCAGACTDFYNLADTNALIRTVIRLE---------SQRSLPRPCCTPSKLGPLPVLYLHQLDFNKTEPRLYALPDMVIDSCGCS
W4Y2H8/278-397              PNECQYEG-EEEHRCCRRRK-YVDFRDLSWTSRWIIEPAGFEAFDCYGPCHNFRSRH-----IRDIFRLPFYGGSPSGLPSRSGSHRTCGVSRSSALPMMYLSATESGAVELKVEEIPNMIVEDCSC-
F6X1A2/279-378              --DCSASRHRRHRKCCREKR-FISFREMEWAKDWIIEPSGYDAYQCAGGCSSSRR------------------------KNSKRSPRSCTVAESSSLPVMYLVK-DGDGTKVEVSEFPNMVVEKCACS
G1KEW2/253-354              --DCKEGTLTEKTICCRQEH-YINFRELTWTQYWIIEPAGYQAYHCVGGCRQPKN----------------------LLRHFGYGERTCAVVESSPLPMMYLVK-KGNYTEIEVAEFPNMIVEKCGCI
A0A1L8G109/148-248          ---CSASGAKKDNICCREEY-FINFRELTWTQYWIIEPAGYNAFRCTGSCKQPKY----------------------PLSHYHYGQRTCAVVESAPLPVMYLVK-KGDYTEIEVAEFPNMIVEKCGCT
W5NGH2/260-357              ---CEKNTAKANSVCCREEY-YINFRELTWTQYWIIEPAGYQAFHCAGNCKQPK-------------------------RNYGYGERTCAAVESAPLPMMYLVK-RGEYTEIEVAEFPNMIVEKCGCT
A0A226NMA2/285-383          ---CKDGIHAGKSTCCRQKH-YINFRELSWTQYWVIEPAGYQAYSCQGGCLQLPS----------------------PLQHWG--ERTCTMAESSPLPIMYLVR-RGNHTEIEATEFPNMIIEKCSCM
A0A226P710/285-383          ---CKDGVHAGKSTCCRQKH-YINFRELSWTQYWVIEPAGYQAYSCQGGCLQLPS----------------------PLQRWG--DRTCTVAESSPLPIMYLVR-RGNHTEIEATEFPNMIIEKCSCM
B3DLA0/258-358              ---CSASGAQKDHICCREEH-FINFRELTWTQYWIIEPAGYNAFHCTGSCKQPKF----------------------PLSHYHYGQRTCAVVESAPLPVMYLVK-KGDYTEIEVAEFPNMIVEKCGCT
Q9PUK3/209-309              ---CKDGVQAGKSTCCRQKH-YINFRELSWTQYWVIEPAGYQAYSCRGGCLQLPG----------------------PLQLWGGRERACAVAESSPLPIMYLVR-RGNHTEIEATEFPNMIIEKCSCM
F1QWZ9/259-355              ---C--NSSPNSSKCCREEH-FINFRELTWTQYWIIEPAGYQAFRCAGGCKQPKR------------------------GFYGYGQRTCAVMESAPLPMMYLVK-KGDYTEIEVAEFPNMIVEKCGCS
A0A0B5JW28/259-355          ---C--NSSPNSSKCCREEH-FINFRELTWTQYWIIEPAGYQAFRCAGGCKQPKR------------------------GFYGYGQRTCAVMESAPLPMMYLVK-KGDYTEIEVAEFPNMIVEKCGCS
A0A1D5PYT7/251-351          ---CKDGVQAGKSTCCRQKH-YINFRELSWTQYWVIEPAGYQAYSCRGGCLQLPG----------------------PLQLWGGRERACAVAESSPLPIMYLVR-RGNHTEIEATEFPNMIIEKCSCM
Q9DFC6/260-359              ---CSASGAKKDNICCREEY-FINFRELTWTQYWIIEPAGYNAFRCAGSCKQPKY----------------------PLSH-HYGERMCAVVESAPLPVMYLVK-KGDYTEIEVAEFPNMIVEKCGCT
F7EDG1/85-172               --DCSASGAQKDHICCREEH-FINFRELTWTQYWIIEPAGYNAFHCTGSCKQPKF----------------------PLSHYHYGQRTCAVVESAPLPVMYLVK-KGDYTEIEV--------------
#=GC scorecons              00062233233443999555068699785775597879678596393959364420000000000000000000000123334344749664775799689965056547867636676766757573
#=GC scorecons_70           ______________***_____******_**__********_**_*_*_*____________________________________*_*_*_**_***_****___*__****__*_******_*_*_
#=GC scorecons_80           ______________***_____*_****_**__*****_**_*__*_*_*____________________________________*_*____*_***_***_______**______*_*__*_*_*_
#=GC scorecons_90           ______________***_____*_**_*_____*___*__*_*__*_*_*______________________________________*_______**_***________*_________________
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