# STOCKHOLM 1.0
#=GF ID 1.25.40.90/FF/000041
#=GF DE Regulator of Ty1 transposition
#=GF AC 1.25.40.90/FF/000041
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 46.224
#=GS 5wozA00/1-138     AC Q05543
#=GS 5wozA00/1-138     OS Saccharomyces cerevisiae S288C
#=GS 5wozA00/1-138     DE Regulator of Ty1 transposition protein 103
#=GS 5wozA00/1-138     DR CATH; 5woz; A:1-133; 
#=GS 5wozA00/1-138     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5wozA00/1-138     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS 5m9dA00/1-142     AC Q05543
#=GS 5m9dA00/1-142     OS Saccharomyces cerevisiae S288C
#=GS 5m9dA00/1-142     DE Regulator of Ty1 transposition protein 103
#=GS 5m9dA00/1-142     DR CATH; 5m9d; A:1-138; 
#=GS 5m9dA00/1-142     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5m9dA00/1-142     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS 5lvfA00/1-142     AC Q05543
#=GS 5lvfA00/1-142     OS Saccharomyces cerevisiae S288C
#=GS 5lvfA00/1-142     DE Regulator of Ty1 transposition protein 103
#=GS 5lvfA00/1-142     DR CATH; 5lvf; A:1-142; 
#=GS 5lvfA00/1-142     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5lvfA00/1-142     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS 2l0iA00/1-142     AC Q05543
#=GS 2l0iA00/1-142     OS Saccharomyces cerevisiae S288C
#=GS 2l0iA00/1-142     DE Regulator of Ty1 transposition protein 103
#=GS 2l0iA00/1-142     DR CATH; 2l0i; A:2-137; 
#=GS 2l0iA00/1-142     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2l0iA00/1-142     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS 2km4A00/1-142     AC Q05543
#=GS 2km4A00/1-142     OS Saccharomyces cerevisiae S288C
#=GS 2km4A00/1-142     DE Regulator of Ty1 transposition protein 103
#=GS 2km4A00/1-142     DR CATH; 2km4; A:2-138; 
#=GS 2km4A00/1-142     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2km4A00/1-142     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS Q05543/1-137      AC Q05543
#=GS Q05543/1-137      OS Saccharomyces cerevisiae S288C
#=GS Q05543/1-137      DE Regulator of Ty1 transposition protein 103
#=GS Q05543/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q05543/1-137      DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS Q75F09/1-136      AC Q75F09
#=GS Q75F09/1-136      OS Eremothecium gossypii ATCC 10895
#=GS Q75F09/1-136      DE AAL081Cp
#=GS Q75F09/1-136      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XBS0/1-138      AC R9XBS0
#=GS R9XBS0/1-138      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XBS0/1-138      DE AaceriAAL081Cp
#=GS R9XBS0/1-138      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS J6EER3/1-138      AC J6EER3
#=GS J6EER3/1-138      OS Saccharomyces kudriavzevii IFO 1802
#=GS J6EER3/1-138      DE RTT103-like protein
#=GS J6EER3/1-138      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS H0GEB9/1-137      AC H0GEB9
#=GS H0GEB9/1-137      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GEB9/1-137      DE Rtt103p
#=GS H0GEB9/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VTE8/1-137  AC A0A0L8VTE8
#=GS A0A0L8VTE8/1-137  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VTE8/1-137  DE RTT103p Protein involved in transcription termination by RNA polymerase II
#=GS A0A0L8VTE8/1-137  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RNV2/1-137  AC A0A0L8RNV2
#=GS A0A0L8RNV2/1-137  OS Saccharomyces eubayanus
#=GS A0A0L8RNV2/1-137  DE RTT103-like protein
#=GS A0A0L8RNV2/1-137  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS N1P560/1-137      AC N1P560
#=GS N1P560/1-137      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P560/1-137      DE Rtt103p
#=GS N1P560/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZYN8/1-137      AC A6ZYN8
#=GS A6ZYN8/1-137      OS Saccharomyces cerevisiae YJM789
#=GS A6ZYN8/1-137      DE Regulator of Ty1 transposition
#=GS A6ZYN8/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z5K1/1-137      AC C8Z5K1
#=GS C8Z5K1/1-137      OS Saccharomyces cerevisiae EC1118
#=GS C8Z5K1/1-137      DE Rtt103p
#=GS C8Z5K1/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LG05/1-137      AC B3LG05
#=GS B3LG05/1-137      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LG05/1-137      DE Uncharacterized protein
#=GS B3LG05/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GQU0/1-137      AC C7GQU0
#=GS C7GQU0/1-137      OS Saccharomyces cerevisiae JAY291
#=GS C7GQU0/1-137      DE Rtt103p
#=GS C7GQU0/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VGG5/1-137      AC B5VGG5
#=GS B5VGG5/1-137      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VGG5/1-137      DE YDR289Cp-like protein
#=GS B5VGG5/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WB28/1-137      AC G2WB28
#=GS G2WB28/1-137      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WB28/1-137      DE K7_Rtt103p
#=GS G2WB28/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GT35/1-137      AC H0GT35
#=GS H0GT35/1-137      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GT35/1-137      DE Rtt103p
#=GS H0GT35/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GF SQ 20
5wozA00/1-138             ----SEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
5m9dA00/1-142             MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
5lvfA00/1-142             MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
2l0iA00/1-142             MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
2km4A00/1-142             MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
Q05543/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
Q75F09/1-136              MSFSEEQFIGKLNGLDETQESIVGASKWLLTLYKEAPVVAQSWAKYILMTSTNTRRKLLAIYLVNDVIQQAKHKRIFQFGNEFGRVLPNVLKQVFPELPQELQKKVQRVVAIWRQRQILSDNVLNNIERYLQGTGA------
R9XBS0/1-138              MSFSEEQFIGKLNGLDETQESIVGASKWLLTLYKEAPVVAQSWAKYILMTSTNTRRKLLAIYLVNDVIQQAKHKRIFQFGNEFGRVLPNVLKQVFPDLPQELQKKVQRVVAIWRQRQILSDNVLNNIERYLQGTGAST----
J6EER3/1-138              MPFSSEQFTTKLSTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRTSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVKDIERNLKSESSPV----
H0GEB9/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
A0A0L8VTE8/1-137          MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
A0A0L8RNV2/1-137          MPFSSEQFTTKLNTLEDSQESIASASKWLLLQYRDAPKVAETWKDYMLRSSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLRKKLSRVVNILKERNIFSKQVVIDIDRNLKTETSP-----
N1P560/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
A6ZYN8/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
C8Z5K1/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
B3LG05/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
C7GQU0/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
B5VGG5/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
G2WB28/1-137              MPFSSEQFTTKLNTLEDSQESISSASEWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
H0GT35/1-137              MPFSSEQFTTKLSTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRTSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVKDIERNLKSESSP-----
#=GC scorecons            7477599966998697769999569989995597799599649569795596999999966996969799995679699565997956699567567696796996599969576969696696769895944444300000
#=GC scorecons_70         *_**_****_***_********_*******__*****_***_*__***__*_*************_******_***_**_*_****_****_**__**********_***_*_***_***__*******_*___________
#=GC scorecons_80         *_**_***__***_***_****__******__*****_**__*__*_*__*_*******__**_*_******__**_**___****___**__*__*_*_**_**__***_*_*_*_*_*__*_*_***_*___________
#=GC scorecons_90         _____***__***_*___****__******__*__**_**__*__*_*__*_*******__**_*_*_****___*_**___**_*___**_______*__*_**__***_*___*_*_*__*___***_*___________
//