# STOCKHOLM 1.0
#=GF ID 1.25.10.10/FF/000661
#=GF DE Cell differentiation family, Rcd1-like containing protein
#=GF AC 1.25.10.10/FF/000661
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.886
#=GS Q9V9S3/10-276  AC Q9V9S3
#=GS Q9V9S3/10-276  OS Drosophila melanogaster
#=GS Q9V9S3/10-276  DE IP11148p
#=GS Q9V9S3/10-276  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS K4C0M8/20-288  AC K4C0M8
#=GS K4C0M8/20-288  OS Solanum lycopersicum
#=GS K4C0M8/20-288  DE Uncharacterized protein
#=GS K4C0M8/20-288  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; 
#=GS K4CF80/7-200   AC K4CF80
#=GS K4CF80/7-200   OS Solanum lycopersicum
#=GS K4CF80/7-200   DE Uncharacterized protein
#=GS K4CF80/7-200   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; 
#=GS A2EMP2/26-300  AC A2EMP2
#=GS A2EMP2/26-300  OS Trichomonas vaginalis
#=GS A2EMP2/26-300  DE Cell differentiation family, Rcd1-like containing protein
#=GS A2EMP2/26-300  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS B4QTB3/10-280  AC B4QTB3
#=GS B4QTB3/10-280  OS Drosophila simulans
#=GS B4QTB3/10-280  DE GD21611
#=GS B4QTB3/10-280  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4PP41/9-280   AC B4PP41
#=GS B4PP41/9-280   OS Drosophila yakuba
#=GS B4PP41/9-280   DE Uncharacterized protein
#=GS B4PP41/9-280   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B3P4Y8/10-280  AC B3P4Y8
#=GS B3P4Y8/10-280  OS Drosophila erecta
#=GS B3P4Y8/10-280  DE GG11840
#=GS B3P4Y8/10-280  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4IJ48/10-280  AC B4IJ48
#=GS B4IJ48/10-280  OS Drosophila sechellia
#=GS B4IJ48/10-280  DE GM16460
#=GS B4IJ48/10-280  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A2FPD4/30-307  AC A2FPD4
#=GS A2FPD4/30-307  OS Trichomonas vaginalis
#=GS A2FPD4/30-307  DE Cell differentiation family, Rcd1-like containing protein
#=GS A2FPD4/30-307  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2FEP5/26-296  AC A2FEP5
#=GS A2FEP5/26-296  OS Trichomonas vaginalis
#=GS A2FEP5/26-296  DE Cell differentiation family, Rcd1-like containing protein
#=GS A2FEP5/26-296  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GF SQ 10
Q9V9S3/10-276          ---------QRGDIDSVFGWIANLCN-KETRLWAMLELFERRTHIDSLGLLLWHSFGAVSGLLQEIVSIYPAIYQ--------EIELTGQQSHRICTAIGLIQAMA-SHPFIGIQLIRCQFMCYLMPLLKMTSQT-RAVEHVRLSVLGVICGLLKSDH---PEIVSYFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVGLKFASRRLARKLHLIHTLARVVHQLTLE--PEPRVLKHVVRIY---SRLADHPQNLELILKLLPAQIRNGYFCQEGLVG------FESASLELADL----
K4C0M8/20-288          AAQLIKHLHGGNNRDEVLKQLNNLI--KQQSSEAMRI---------NLGFHLWNSSLTTTTLLQEVVAAYAKFEV---------STLNMAESLQVCKALTVWQDLF---------YYAARIPHYLLPYLGMSTKVIWSLQFLRLRILEFLVALAKFDELHGQEILHVLLDTNLFSLCLHCIRHGDTQIQKAATLILMKILMQEDGLKYCCAYPDDFQSLIQVLRQLVEETFTFEIPCPQHLKYVIQCYLCISRVAREDGVYETVGNML--QLIGNTFHNIIHKDPEIPKMLNQLVRNLNH-----
K4CF80/7-200           ----------------------------------------------------------------------AAVEQ-------------------------LQHSLH---------AFAAEIPCYFYPFLKPCGDD-KHMECVRTTTLGVLNDLTKFDDPHGSHALCFFLESEVVPLCLKCIDVYDKKSQKLATLIVMNILTQESGLTYCSATPECFFSIVQVLRRVVEKLSLK--TCLLHLEYVIQCYVCVSKIYRSIGPCDELIRQIPPQLFDNTFRRTLLHNHEASWMLQVLLSIFMDV----
A2EMP2/26-300          ---------PARTGEQVSKYIKNITI-PSQRQEAVQYLSINRDTIKGIGVQLWETPAVMVALLSDIMSIYPAITSVATVLSTYPSPLSIQHVVHVCNCIALLQSVASASPEVRKGFISSNMPIYLFPFIHATNQI-RECEMLKLASLGVISCLAQSGE---SESIDYLIQYEFVPLCLRVLKFGDEINKIVASYIIAKVFSDKKGIQFLCCQNDHLETALHILNKSVVDLNSQ--FSPRLSRNVCMAY---ESLLAVQDALPTIKKCAIAEIKDALIATDTD--------FKRLYTSLLSLQ---
B4QTB3/10-280          ---------QRGDIDSVFGWIANLCN-KETRLWAMLELFERRSNIDSLGLLLWHSFGAVSGLLQEIVTIYPVIYQ--------EIELTAQQSHRICTAIGLIQAMA-AHPFIGIQLIRCQFMCYLMPLLKMTSQT-RAVEHVRLSVLGVICGLLKSDH---PEIVSYFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVGLKFASRRLARRLHLIHTLARVVHQLTLE--PEPRVLKHVVRIY---SRLADHPQNLELVLKLLPAQIRNGYFCQEVLVG------FESASLELADLNRKL
B4PP41/9-280           E--------QRSDIERVYGWIANLCN-KETRFWAMLELCERRSHIDSLGLLLWHSFGAVSGLLQEIVSIYPAIYQ--------DIELTGQHSHRICTAIGLIQAMA-SHPFIGIQLIRCQFMCYLMPLLKMTSQT-RTVEHVRLSVLGVICGLLKSDH---PEIVAYFLGTELIPLILRQLELGTTMSKVLCAFVLYRTLEHEVGLKFASRRLSRRLHLIHTLARVVHQLTLE--PEPRVLKHVVRIY---SRLADHPQSLELILKLLPAQIRNGYFCQEGLAG------FESASLELADLNRKL
B3P4Y8/10-280          ---------QRGDIDPVYGWIANLCN-KETRFWAMLELCERRNHIDSLGLLLWHSFGAVSGLLQEIVSIYPAIYQ--------DIELTGQQSHRICTAIGLIQVMA-SHPFIGIQLIRCQFMCYLMPLLKMTSQT-RAVEHVRLSVLGVICALLKSDH---AEIVVYFLGTELIPLILRQLELGTTMSKVLCAFVLYRTLEHEVGLKFASRRLARRLHLIHTLARVVHQLTLE--PEPRVLKHVVRIY---SRLADHPQSLELIVKLLPAQIRNGYFCQEGLAG------FESASLELANLNRKL
B4IJ48/10-280          ---------QRGDIDSVFGWIANLCN-KETRLWAMLELFERRSHIDSLGLLLWHSFGAVSGLLQEIVTIYPVIYQ--------EIELTGQQSHRICTAIGLIQAMA-AHPFIGIQLIRCQFMCYLMPLLKMTSQT-RAVEHVRLSVLGVICGLLKSDH---PEIVSYFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVGLKFASRRLARRLHLIHTLARVVHQLTLE--PEPRVLKHIVRIY---SRLADHPQNLELVLKLLPAQIRNGYFCQEVLVG------FESASIELADLNRKL
A2FPD4/30-307          ---------MAVRNETAIAQIKLITLSQKDRAEAIQSLSHQREQIPNIGVLLWESPASVAALLEEIISVVPHIAAISNSPVTTQTTISSNHAARVCYALTLFQSIAVASDEVRTQFLKADIPSYLTPFLHTLNQS-RECEHFKLASLGIIGTIAMSNS---QEAFDYLISKDFVPLCLRILKFSSEIHKIFASYIIQRILSTQRGIDEICKDAEKIKSVLDVLYNEVKILVVN--YNPRIVRNIIFAY---QYLFQSKVAVSILSQYQFDELDTLAKSQKCEES------FLKLIYQLVNHQ---
A2FEP5/26-296          I--------QHRNNEKMLQLVRRLTLSPKERAEALHILSVQREQIPGLAPYLWYSPATITALLSEIISIYPYLAT---------NNLNIPLSNRVCNVLTLFQCVA-GHDETRTPFVRANIPIYLFPFLHQTSQS-REAEYFKLTSLGIIGSLVKAEQ---PDIIEYLLKADFVPLCLRILQFSQEISRTVAAFIIQKILSDAGGKNYICSTREHIETVLKVLNRVVCDLTRD--FSSRLAKHVIGSY---QILFEIKEVRNLIASLLPAELKDAKFSPNTDEQ------FKNLVTTLQNMTTS-
#=GC scorecons         00000000032232424222433432033242264224212422423453366352333336635544446353400000000122532334244624437374550222122224444455497395754446306337457744976633746464000465536673465579596364544445635555753557345395453533344324555593559337443004365356575339000546343333343524344466343353433323000000633532373431000
#=GC scorecons_70      _________________________________*_________________**________**_______*________________________*____*_*____________________**_*_*_______*__*__**__**_*__*_*_______*___***__*__**_**_*_____________*____*____*_________________*___*__*_____________*___*_____*________________**__________________*______*_______
#=GC scorecons_80      ____________________________________________________________________________________________________*_*____________________**_*_*__________*______**____*_____________________**_*_____________________*____*_________________*___*__*_____________*___*_________________________________________________*_______
#=GC scorecons_90      ___________________________________________________________________________________________________________________________*__*___________________*____________________________*_*__________________________*_________________*___*____________________*_________________________________________________________
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