# STOCKHOLM 1.0
#=GF ID 1.25.10.10/FF/000367
#=GF DE RING-type E3 ubiquitin transferase
#=GF AC 1.25.10.10/FF/000367
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 57.747
#=GS Q9SNC6/338-491      AC Q9SNC6
#=GS Q9SNC6/338-491      OS Arabidopsis thaliana
#=GS Q9SNC6/338-491      DE U-box domain-containing protein 13
#=GS Q9SNC6/338-491      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SNC6/338-491      DR GO; GO:0004842; GO:0005515; GO:0005634; GO:0005737; GO:0005829; GO:0016567; GO:0042742; GO:0043066; GO:0050777; GO:0070696; GO:2000028; 
#=GS Q9SNC6/338-491      DR EC; 2.3.2.27; 
#=GS Q10NB2/372-502      AC Q10NB2
#=GS Q10NB2/372-502      OS Oryza sativa Japonica Group
#=GS Q10NB2/372-502      DE RING-type E3 ubiquitin transferase
#=GS Q10NB2/372-502      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A2C9V116/338-493  AC A0A2C9V116
#=GS A0A2C9V116/338-493  OS Manihot esculenta
#=GS A0A2C9V116/338-493  DE RING-type E3 ubiquitin transferase
#=GS A0A2C9V116/338-493  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot; Manihot esculenta; 
#=GS A0A1U8P1W7/342-491  AC A0A1U8P1W7
#=GS A0A1U8P1W7/342-491  OS Gossypium hirsutum
#=GS A0A1U8P1W7/342-491  DE RING-type E3 ubiquitin transferase
#=GS A0A1U8P1W7/342-491  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malvales; Malvaceae; Malvoideae; Gossypium; Gossypium hirsutum; 
#=GS B9HPI5/343-495      AC B9HPI5
#=GS B9HPI5/343-495      OS Populus trichocarpa
#=GS B9HPI5/343-495      DE RING-type E3 ubiquitin transferase
#=GS B9HPI5/343-495      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; 
#=GS A0A0D3BHI4/332-486  AC A0A0D3BHI4
#=GS A0A0D3BHI4/332-486  OS Brassica oleracea var. oleracea
#=GS A0A0D3BHI4/332-486  DE RING-type E3 ubiquitin transferase
#=GS A0A0D3BHI4/332-486  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS V4L4V7/338-492      AC V4L4V7
#=GS V4L4V7/338-492      OS Eutrema salsugineum
#=GS V4L4V7/338-492      DE RING-type E3 ubiquitin transferase
#=GS V4L4V7/338-492      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS R0HH82/338-492      AC R0HH82
#=GS R0HH82/338-492      OS Capsella rubella
#=GS R0HH82/338-492      DE RING-type E3 ubiquitin transferase
#=GS R0HH82/338-492      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7LN13/338-491      AC D7LN13
#=GS D7LN13/338-491      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LN13/338-491      DE RING-type E3 ubiquitin transferase
#=GS D7LN13/338-491      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS M4EYC8/335-489      AC M4EYC8
#=GS M4EYC8/335-489      OS Brassica rapa subsp. pekinensis
#=GS M4EYC8/335-489      DE RING-type E3 ubiquitin transferase
#=GS M4EYC8/335-489      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A453IDH6/382-505  AC A0A453IDH6
#=GS A0A453IDH6/382-505  OS Aegilops tauschii subsp. strangulata
#=GS A0A453IDH6/382-505  DE RING-type E3 ubiquitin transferase
#=GS A0A453IDH6/382-505  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; 
#=GS A0A3L6TPI4/492-615  AC A0A3L6TPI4
#=GS A0A3L6TPI4/492-615  OS Panicum miliaceum
#=GS A0A3L6TPI4/492-615  DE RING-type E3 ubiquitin transferase
#=GS A0A3L6TPI4/492-615  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; 
#=GS A0A3P6FDM5/338-492  AC A0A3P6FDM5
#=GS A0A3P6FDM5/338-492  OS Brassica oleracea
#=GS A0A3P6FDM5/338-492  DE RING-type E3 ubiquitin transferase
#=GS A0A3P6FDM5/338-492  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS A0A1D6JY56/380-507  AC A0A1D6JY56
#=GS A0A1D6JY56/380-507  OS Zea mays
#=GS A0A1D6JY56/380-507  DE RING-type E3 ubiquitin transferase
#=GS A0A1D6JY56/380-507  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A3B6JJP0/443-566  AC A0A3B6JJP0
#=GS A0A3B6JJP0/443-566  OS Triticum aestivum
#=GS A0A3B6JJP0/443-566  DE RING-type E3 ubiquitin transferase
#=GS A0A3B6JJP0/443-566  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A446QRR8/381-504  AC A0A446QRR8
#=GS A0A446QRR8/381-504  OS Triticum turgidum subsp. durum
#=GS A0A446QRR8/381-504  DE RING-type E3 ubiquitin transferase
#=GS A0A446QRR8/381-504  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum turgidum; Triticum turgidum subsp. durum; 
#=GS A0A0E0KBY7/379-502  AC A0A0E0KBY7
#=GS A0A0E0KBY7/379-502  OS Oryza punctata
#=GS A0A0E0KBY7/379-502  DE RING-type E3 ubiquitin transferase
#=GS A0A0E0KBY7/379-502  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS J3LMG7/384-507      AC J3LMG7
#=GS J3LMG7/384-507      OS Oryza brachyantha
#=GS J3LMG7/384-507      DE RING-type E3 ubiquitin transferase
#=GS J3LMG7/384-507      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS A0A0D3FGU4/377-500  AC A0A0D3FGU4
#=GS A0A0D3FGU4/377-500  OS Oryza barthii
#=GS A0A0D3FGU4/377-500  DE RING-type E3 ubiquitin transferase
#=GS A0A0D3FGU4/377-500  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS I1P9Z9/377-500      AC I1P9Z9
#=GS I1P9Z9/377-500      OS Oryza glaberrima
#=GS I1P9Z9/377-500      DE RING-type E3 ubiquitin transferase
#=GS I1P9Z9/377-500      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0D9Z5C2/383-505  AC A0A0D9Z5C2
#=GS A0A0D9Z5C2/383-505  OS Oryza glumipatula
#=GS A0A0D9Z5C2/383-505  DE RING-type E3 ubiquitin transferase
#=GS A0A0D9Z5C2/383-505  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0E0DT26/379-502  AC A0A0E0DT26
#=GS A0A0E0DT26/379-502  OS Oryza meridionalis
#=GS A0A0E0DT26/379-502  DE RING-type E3 ubiquitin transferase
#=GS A0A0E0DT26/379-502  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS M4DNX4/328-481      AC M4DNX4
#=GS M4DNX4/328-481      OS Brassica rapa subsp. pekinensis
#=GS M4DNX4/328-481      DE RING-type E3 ubiquitin transferase
#=GS M4DNX4/328-481      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A0D3A8T5/338-492  AC A0A0D3A8T5
#=GS A0A0D3A8T5/338-492  OS Brassica oleracea var. oleracea
#=GS A0A0D3A8T5/338-492  DE RING-type E3 ubiquitin transferase
#=GS A0A0D3A8T5/338-492  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A3B6HUB3/381-504  AC A0A3B6HUB3
#=GS A0A3B6HUB3/381-504  OS Triticum aestivum
#=GS A0A3B6HUB3/381-504  DE RING-type E3 ubiquitin transferase
#=GS A0A3B6HUB3/381-504  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A3B6ISC3/432-554  AC A0A3B6ISC3
#=GS A0A3B6ISC3/432-554  OS Triticum aestivum
#=GS A0A3B6ISC3/432-554  DE RING-type E3 ubiquitin transferase
#=GS A0A3B6ISC3/432-554  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GF SQ 26
Q9SNC6/338-491              --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQR-
Q10NB2/372-502              AAQHHNAPASCTAAEHSNVVELLQKLLSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSITDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVD--------------------------
A0A2C9V116/338-493          SSRCNKTSSAYSPAERTKIEILLHKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHAVTALLNLSICEDNKGSIISAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQR-
A0A1U8P1W7/342-491          -----KTTSACSPAERTKIEILLRKLASSSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRIQEHAVTALLNLSICEDNKGSIISSGAVPGIVQVLKKGSMEARENAAATLFSLSVVDENKVTIGASGAIPPLVVLLSEGTQ--
B9HPI5/343-495              ---SNKTVSTCSPAERAKTEILLHKLASGSLEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAITALLNLSICEENKGSIVSAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSLGAIPPLVTLLSEGTQR-
A0A0D3BHI4/332-486          -FRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTHR-
V4L4V7/338-492              --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRG
R0HH82/338-492              --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRG
D7LN13/338-491              --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQR-
M4EYC8/335-489              --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRG
A0A453IDH6/382-505          -----------TASEHSKVIELLQKLSSQNLADQRGAAGMLRQLAKRSAENRACIGEAGAIPILVSLLPTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVLKRGSMEARENSAATLFSLSLVDENKV----------------------
A0A3L6TPI4/492-615          -----------TAAEHNNVVELLKKLSSQNLEDQRGAAGMLRQLAKRSAENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVLKRGSMEARENSAATLFSLSIVDENKV----------------------
A0A3P6FDM5/338-492          --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRG
A0A1D6JY56/380-507          -----------SAAEHSNVLELLQKLSSQNLEDQRGSAGMLRQLAKRSAENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIISSGAVPGIVHVLKRGSMEARENSAATLFSLSIVDENKVTIGC------------------
A0A3B6JJP0/443-566          -----------TASEHSKVIELLQKLSSQNLADQCGAAGMLRQLAKRSAENRACIGEAGAIPILVSLLPTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVLKRGSMEARENSAATLFSLSLVDENKV----------------------
A0A446QRR8/381-504          -----------TASEHSKVIELLQKLSSQNLADQRGAAGMLRQLAKRSAENRACIGEAGAIPILVSLLPTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVLKRGSMEARENSAATLFSLSLVDENKV----------------------
A0A0E0KBY7/379-502          -----------TAAEHSNVVELLQKLSSQNLEDQCEAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKI----------------------
J3LMG7/384-507              -----------TAAEHSKVVELLQKLSSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKI----------------------
A0A0D3FGU4/377-500          -----------TAAEHSNVVELLQKLSSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKI----------------------
I1P9Z9/377-500              -----------TAAEHSNVVELLQKLSSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKI----------------------
A0A0D9Z5C2/383-505          ------------AAEHSNVVELLQKLSSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKI----------------------
A0A0E0DT26/379-502          -----------TAAEHSNVVELLQKLSSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKI----------------------
M4DNX4/328-481              --RPSKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTHR-
A0A0D3A8T5/338-492          --RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRG
A0A3B6HUB3/381-504          -----------TASEHSKVIELLQKLSSQNLADQRGAAGMLRQLAKRSAENRACIGEAGAIPILVSLLPTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVLKRGSMEARENSAATLFSLSLVDENKV----------------------
A0A3B6ISC3/432-554          -----------TASEHSKVIELLQKLSSQNLADQRGAAGMLRQLAKRSAENRACIGEAGAIPILVSLLPTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVLKRGSMEARENSAATLFSLSLVDENK-----------------------
#=GC scorecons              0011121121156794566459647955575699848994695999966799659679999969969958695569995899999999696996597669979979699979999999969999999967988862221122222221221222110
#=GC scorecons_70           _____________**__**__**_**___*_****_***_**_****_****__*_*********_**_*_*___***_***********_**__**__********************_********_******______________________
#=GC scorecons_80           _____________**______*__**___*__***_***__*_****___**__*_******_**_**_*_*___***_*********_*_**__*___*******_***_********_********_*****_______________________
#=GC scorecons_90           ______________*______*___*______**__***__*_****___**__*__*****_**_**_*_*___***_*********_*_**__*___**_**_*_***_********_********__****_______________________
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