# STOCKHOLM 1.0
#=GF ID 1.25.10.10/FF/001271
#=GF DE Sorting Of Apical Proteins
#=GF AC 1.25.10.10/FF/001271
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 11.506
#=GS O01485/1009-1179_1214-1426     AC O01485
#=GS O01485/1009-1179_1214-1426     OS Caenorhabditis elegans
#=GS O01485/1009-1179_1214-1426     DE Sorting Of Apical Proteins
#=GS O01485/1009-1179_1214-1426     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O01485/1009-1179_1214-1426     DR GO; GO:0045176; 
#=GS G0PMD9/1028-1186_1225-1437     AC G0PMD9
#=GS G0PMD9/1028-1186_1225-1437     OS Caenorhabditis brenneri
#=GS G0PMD9/1028-1186_1225-1437     DE Uncharacterized protein
#=GS G0PMD9/1028-1186_1225-1437     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A261A0F8/892-1058_1092-1308  AC A0A261A0F8
#=GS A0A261A0F8/892-1058_1092-1308  OS Caenorhabditis remanei
#=GS A0A261A0F8/892-1058_1092-1308  DE Uncharacterized protein
#=GS A0A261A0F8/892-1058_1092-1308  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A8XUT0/1025-1195_1230-1444     AC A8XUT0
#=GS A8XUT0/1025-1195_1230-1444     OS Caenorhabditis briggsae
#=GS A8XUT0/1025-1195_1230-1444     DE Protein CBG19103
#=GS A8XUT0/1025-1195_1230-1444     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 4
O01485/1009-1179_1214-1426             PTFVVDVVQGISKCLTALITCVGPELSCPGVIDGVRTSLLAACAIQLSHSDPFVQAEAISGLQQMHLFAPRYVHMAQLVVDISSLLSSTHLVIRRQSVSCLRQLVQRESKEVRNHAQVLVPQGIVDTNKKKFALPESGLEGALFGMLDTEVNKELRCHLQETLISLVQGTS--EDDADDDDDEDGDDDTNLAGISSLMEEDKGKVQPRWPTKVFTMEIVNRLMSVCDTERAHLDMALAKELQITSAGKNDYLVLHLSDLVRMSFMAATSDNSLLRIAGLKSLEEVIIRFSSCPEPEFPGHMILEQFQAQVGAALRPAFTDDTPSNVTSVACQVCSTWIGSGVARDLSDLKRVHQLLVSSLNKLKHGSINVQLYSESAATLEKLSIL----
G0PMD9/1028-1186_1225-1437             -------FQ-----LTALITCVGPELSCPGVIDGVRTSLLAACAIQMSHSDPSVQAEAISGLQQMHLFAPRYVHMAQLVVDISSLLSSTDLVIRKQAVSCLRQLVQRESKEVRNHAQVLVPQGIVDTNKKKFALPESGLEGALFGMLDTEVNKELRCHLQETLISLVQGTS------DDDENEDGDDDTNLAGISSLMEEDKGKVQPRWPTKVFTMEIVNRLMSVCDTERAHLDMALAKELQNTSGGKNDYLVLHLSDLVRMSFMAATSDNSSLRIAGLKSLEEVIIRFSSCPEPEFPGHMILEQFQAQVGAALRPAFTDDTPSNVTSVACQVCSTWIGSGVARDLNDLKRVHQLLVSSLNKLKQGSINVQLYSESAATLEKLSILKAWA
A0A261A0F8/892-1058_1092-1308          ----VDVVQGISKCLTALITCVGPELSCPGVIDGVRTSLLAACAIQLSHSDPFVQAEAISGLQQMHLFAPRYVHMAQLVIDISSLLSSTHLVIRKQAVSCLRQLVQRESKEVRNHAQILVPQGIVETNKKKFALPETGLEGALFGMLDTETNKELRIHLQETLISLVQGTSKLEEDADDDDDEDGDDDTNLAGISSLMEEDKGKVQPRWPTKVFTMEIVNRLMSVCDTERAHLDMALAKELQITSGGKNDYLVLHLSDLVRMSFMAATSDNSLLRIAGLKSLEEVIIRFSSCPEPEFPGHMILEQFQAQVGAALRPAFTDDTPSNVTSVACQVCSTWIGSGVARDLNDLKRVHQLLVSSLNKLKHGSINVQLYSESAATLEKLSILKA--
A8XUT0/1025-1195_1230-1444             PTFVVDVVQGISKCLTALITCVGPELSCPGVIDGVRTSLLAACAIQLSHSDPFVQAEAISGLQQMHLFAPRYVHMAQLVVDISSLLTSTHLVIRRQAVSCLRQLVQRESKEVRNHAQVLVPQGIVETNKKKFALPESGLEGALFGMLDTEVNKELRVHLQETLVSLVQGTS--EEDGDDEDDEEGDDDTNLAGISSLMEEDRGKVQPRWPTKVFTMEIVNRLMSVCDTERAHLDMALAKELQITSVGKNDYLVLHLSDLVRMSFMAATSDNSLLRIAGLKSLEEVIIRFSSCPEPEFPGHMILEQFQAQVGAALRPAFTDDTPSNVTSVACQVCSTWIGSGVARDLNDLKRVHQLLVSSLNKLKHGSINVQLYSESAATLEKLSILKA--
#=GC scorecons                         111133359333339999999999999999999999999999999969999949999999999999999999999999979999996995999969699999999999999999999799999996999999999969999999999999699999399999979999999003232997669799999999999999999799999999999999999999999999999999999999994994999999999999999999999999994999999999999999999999999999999999999999999999999999999999999999999999999969999999999999999969999999999999999999994400
#=GC scorecons_70                      ________*_____**************************************_************************************_************************************************************_*****_**************______****_************************************************************_**_**************************_*****************************************************************************************************************____
#=GC scorecons_80                      ________*_____********************************_*****_*********************************_**_****_*_****************************_**********_*************_*****_**************______***__************************************************************_**_**************************_*************************************************************************_*****************_*********************____
#=GC scorecons_90                      ________*_____********************************_*****_**************************_******_**_****_*_********************_*******_**********_*************_*****_******_*******______**___*_*****************_****************************************_**_**************************_*************************************************************************_*****************_*********************____
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