# STOCKHOLM 1.0
#=GF ID 1.20.5.300/FF/000009
#=GF DE Spike glycoprotein
#=GF AC 1.20.5.300/FF/000009
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 15.774
#=GS P11223/1008-1083      AC P11223
#=GS P11223/1008-1083      OS Avian infectious bronchitis virus (strain Beaudette)
#=GS P11223/1008-1083      DE Spike glycoprotein
#=GS P11223/1008-1083      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS P11223/1008-1083      DR GO; GO:0019064; 
#=GS P12722/1009-1084      AC P12722
#=GS P12722/1009-1084      OS Avian infectious bronchitis virus (strain D274)
#=GS P12722/1009-1084      DE Spike glycoprotein
#=GS P12722/1009-1084      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS Q778S6/1008-1083      AC Q778S6
#=GS Q778S6/1008-1083      OS Avian infectious bronchitis virus (strain Beaudette CK)
#=GS Q778S6/1008-1083      DE S protein
#=GS Q778S6/1008-1083      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS P05135/1009-1084      AC P05135
#=GS P05135/1009-1084      OS Avian infectious bronchitis virus (strain 6/82)
#=GS P05135/1009-1084      DE Spike glycoprotein
#=GS P05135/1009-1084      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS P12651/1008-1083      AC P12651
#=GS P12651/1008-1083      OS Avian infectious bronchitis virus (strain M41)
#=GS P12651/1008-1083      DE Spike glycoprotein
#=GS P12651/1008-1083      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS F4MIW6/1008-1083      AC F4MIW6
#=GS F4MIW6/1008-1083      OS Infectious bronchitis virus
#=GS F4MIW6/1008-1083      DE Spike glycoprotein
#=GS F4MIW6/1008-1083      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS G3C7D2/1014-1089      AC G3C7D2
#=GS G3C7D2/1014-1089      OS Infectious bronchitis virus
#=GS G3C7D2/1014-1089      DE Spike protein
#=GS G3C7D2/1014-1089      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS A0A1V0G396/1013-1086  AC A0A1V0G396
#=GS A0A1V0G396/1013-1086  OS Infectious bronchitis virus
#=GS A0A1V0G396/1013-1086  DE Spike protein
#=GS A0A1V0G396/1013-1086  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS G4RJ69/1015-1090      AC G4RJ69
#=GS G4RJ69/1015-1090      OS Infectious bronchitis virus
#=GS G4RJ69/1015-1090      DE Spike protein
#=GS G4RJ69/1015-1090      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS Q2XV39/405-479        AC Q2XV39
#=GS Q2XV39/405-479        OS Infectious bronchitis virus
#=GS Q2XV39/405-479        DE Spike glycoprotein S2 subunit
#=GS Q2XV39/405-479        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS G3C7A7/1014-1089      AC G3C7A7
#=GS G3C7A7/1014-1089      OS Infectious bronchitis virus
#=GS G3C7A7/1014-1089      DE Spike protein
#=GS G3C7A7/1014-1089      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS A0A1V0QHA3/864-939    AC A0A1V0QHA3
#=GS A0A1V0QHA3/864-939    OS Infectious bronchitis virus
#=GS A0A1V0QHA3/864-939    DE Spike protein
#=GS A0A1V0QHA3/864-939    DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS B2MWL9/1009-1084      AC B2MWL9
#=GS B2MWL9/1009-1084      OS Infectious bronchitis virus
#=GS B2MWL9/1009-1084      DE S protein
#=GS B2MWL9/1009-1084      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GS B8YDG2/462-538        AC B8YDG2
#=GS B8YDG2/462-538        OS Infectious bronchitis virus
#=GS B8YDG2/462-538        DE S2 glycoprotein
#=GS B8YDG2/462-538        DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Avian coronavirus; 
#=GF SQ 14
P11223/1008-1083              -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
P12722/1009-1084              -ANYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDEFNYTVPILDIGSEIDRIQGVIQGLNDSLIDLETL
Q778S6/1008-1083              -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
P05135/1009-1084              -ANYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDEFNYTVPILDIGSEIDRIQGVIQGLNDSLIDLETL
P12651/1008-1083              -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
F4MIW6/1008-1083              -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
G3C7D2/1014-1089              -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
A0A1V0G396/1013-1086          ---YVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
G4RJ69/1015-1090              -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
Q2XV39/405-479                QANYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDEFNYTVPVLNISSEIDRIQGVIQGLNDSLIDLE--
G3C7A7/1014-1089              -ANYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLETL
A0A1V0QHA3/864-939            -ANYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
B2MWL9/1009-1084              -ANYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDEFNYTVPILDIGSEIDRIQGVIQGLNDSLIDLETL
B8YDG2/462-538                QVNYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKL
#=GC scorecons                06799999999999999999999699999999999999999969999997979599999999999999999999936
#=GC scorecons_70             __****************************************_**********_*********************__
#=GC scorecons_80             ___********************_******************_**********_*********************__
#=GC scorecons_90             ___********************_******************_******_*_*_*********************__
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