# STOCKHOLM 1.0
#=GF ID 1.20.1440.230/FF/000003
#=GF DE NADH-quinone oxidoreductase subunit F
#=GF AC 1.20.1440.230/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.161
#=GS Q5LT59/484-560      AC Q5LT59
#=GS Q5LT59/484-560      OS Ruegeria pomeroyi DSS-3
#=GS Q5LT59/484-560      DE Formate dehydrogenase, beta subunit
#=GS Q5LT59/484-560      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; 
#=GS Q5LT59/484-560      DR GO; GO:0008863; GO:0009061; GO:0009326; 
#=GS Q603S6/489-582      AC Q603S6
#=GS Q603S6/489-582      OS Methylococcus capsulatus str. Bath
#=GS Q603S6/489-582      DE NAD-reducing hydrogenase, alpha subunit
#=GS Q603S6/489-582      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus; Methylococcus capsulatus; 
#=GS Q603S6/489-582      DR GO; GO:0006734; GO:0016696; 
#=GS A9WFB6/343-438      AC A9WFB6
#=GS A9WFB6/343-438      OS Chloroflexus aurantiacus J-10-fl
#=GS A9WFB6/343-438      DE NADH-quinone oxidoreductase subunit F
#=GS A9WFB6/343-438      DR ORG; Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus; Chloroflexus aurantiacus; 
#=GS A0A3M1WFA1/343-438  AC A0A3M1WFA1
#=GS A0A3M1WFA1/343-438  OS Chloroflexi bacterium
#=GS A0A3M1WFA1/343-438  DE NADH-quinone oxidoreductase subunit F
#=GS A0A3M1WFA1/343-438  DR ORG; Bacteria; Chloroflexi; Chloroflexi bacterium; 
#=GS A0A2S0MM42/485-561  AC A0A2S0MM42
#=GS A0A2S0MM42/485-561  OS Thalassococcus sp. SH-1
#=GS A0A2S0MM42/485-561  DE NADH-quinone oxidoreductase subunit F
#=GS A0A2S0MM42/485-561  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassococcus; Thalassococcus sp. SH-1; 
#=GS A0A0P1GK47/485-561  AC A0A0P1GK47
#=GS A0A0P1GK47/485-561  OS Tropicibacter naphthalenivorans
#=GS A0A0P1GK47/485-561  DE NADH-quinone oxidoreductase subunit 1
#=GS A0A0P1GK47/485-561  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tropicibacter; Tropicibacter naphthalenivorans; 
#=GS A0A238J2E3/486-562  AC A0A238J2E3
#=GS A0A238J2E3/486-562  OS Boseongicola aestuarii
#=GS A0A238J2E3/486-562  DE NADH-quinone oxidoreductase subunit 1
#=GS A0A238J2E3/486-562  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Boseongicola; Boseongicola aestuarii; 
#=GS A0A126V5A2/488-564  AC A0A126V5A2
#=GS A0A126V5A2/488-564  OS Halocynthiibacter arcticus
#=GS A0A126V5A2/488-564  DE NADH-quinone oxidoreductase subunit F
#=GS A0A126V5A2/488-564  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Halocynthiibacter; Halocynthiibacter arcticus; 
#=GS A0A0J5QGK3/485-561  AC A0A0J5QGK3
#=GS A0A0J5QGK3/485-561  OS Puniceibacterium sp. IMCC21224
#=GS A0A0J5QGK3/485-561  DE NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
#=GS A0A0J5QGK3/485-561  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Puniceibacterium; Puniceibacterium sp. IMCC21224; 
#=GS A0A1X7BW98/485-561  AC A0A1X7BW98
#=GS A0A1X7BW98/485-561  OS Roseovarius aestuarii
#=GS A0A1X7BW98/485-561  DE NADP-reducing hydrogenase subunit HndC
#=GS A0A1X7BW98/485-561  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius; Roseovarius aestuarii; 
#=GS A0A2E2PD93/484-560  AC A0A2E2PD93
#=GS A0A2E2PD93/484-560  OS Pseudooceanicola sp.
#=GS A0A2E2PD93/484-560  DE NADH-quinone oxidoreductase subunit F
#=GS A0A2E2PD93/484-560  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudooceanicola; Pseudooceanicola sp.; 
#=GS A0A2D5IV16/499-575  AC A0A2D5IV16
#=GS A0A2D5IV16/499-575  OS Rhodobacteraceae bacterium
#=GS A0A2D5IV16/499-575  DE NADH-quinone oxidoreductase subunit F
#=GS A0A2D5IV16/499-575  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacteraceae bacterium; 
#=GS Q5LV69/491-567      AC Q5LV69
#=GS Q5LV69/491-567      OS Ruegeria pomeroyi DSS-3
#=GS Q5LV69/491-567      DE Formate dehydrogenase, beta subunit
#=GS Q5LV69/491-567      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; 
#=GS Q5LV69/491-567      DR GO; GO:0008863; GO:0009061; GO:0009326; 
#=GF SQ 13
Q5LT59/484-560              R-DAALNMLRFFEDESCGQCTPCRAGCEKAVKLM-------QAEHWDQPLLEELCQVMADASICGLGQAAPNPIRLTMKHFAEEI-------------
Q603S6/489-582              VIGIARNFTHFFAHESCGFCTPCRVGTALLKNLL-DKIAEGHGATGDLAELSRLGRFVRSASHCGLGQTAANPILSTLERYPEIYQARLK---TIDFE
A9WFB6/343-438              --HVAYKMDEFFKHESCGKCTPCREGTHWLVRTLHRMVEEGHATAADIDTLHSIYRQMAGNCFCLLGESAVMPIKSALQLFPHEFEALVKRSSSRNGH
A0A3M1WFA1/343-438          --HVAYKMDEFFKHESCGKCTPCREGTHWLVRTLHRMVEEGHATAADIDTLHSIYRQMAGNCFCLLGESAVMPIKSALQLFPHEFEALVKRSSSRNGH
A0A2S0MM42/485-561          R-DAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QADHWDQPLLEDLCQAMADASICGLGQAAPNPIRLAMKHFPDEI-------------
A0A0P1GK47/485-561          K-DAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------SADHWDKPLLEELCQAMGDASICGLGQAAPNPIRLVMRHFPDEI-------------
A0A238J2E3/486-562          K-AAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QADTWDQPLLEDLCQAMADASICGLGQAAPNPIRLTIKHFPDEI-------------
A0A126V5A2/488-564          R-DAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QADHWDQPLLEELCQTMVDASICGLGQAAPNPIRLVMKHFPNEI-------------
A0A0J5QGK3/485-561          R-DAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QAEHWDQPLLEELCQAMGDASICGLGQAAPNPIRMTIKHFGDEI-------------
A0A1X7BW98/485-561          K-EAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QADKWDQPLLEELCTAMADASICGLGQAAPNPIRLTMKHFPDEV-------------
A0A2E2PD93/484-560          R-AAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QADTWDQPLLEDLCTAMADASICGLGQAAPNPIRLTIKHFADEI-------------
A0A2D5IV16/499-575          R-AAALNMLRFFEDESCGQCTPCRVGCEKAVKLM-------QADHWDQPLLEALCTTMADASICGLGQAAPNPIRLTMTHFPDEV-------------
Q5LV69/491-567              R-DAALNMLRFFEDESCGQCTPCRAGCEKAVKLM-------QAEHWDQPLLEELCQVMADASICGLGQAAPNPIRLTMKHFAEEI-------------
#=GC scorecons              20359467459955999949999949543566560001011674449444944655375566495996595599545654865640100100000000
#=GC scorecons_70           ____*_**__**__****_*****_*____*__*________*___*___*__*___*___*_*_***_*__**______**_*______________
#=GC scorecons_80           ____*__*__**__****_*****_*________________*___*___*______*_____*_**__*__**______*_________________
#=GC scorecons_90           ____*_____**__****_*****_*____________________*___*____________*_**__*__**______*_________________
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