# STOCKHOLM 1.0
#=GF ID 1.20.120.1910/FF/000008
#=GF DE Cysteine-tRNA ligase
#=GF AC 1.20.120.1910/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.903
#=GS Q54KR1/362-547      AC Q54KR1
#=GS Q54KR1/362-547      OS Dictyostelium discoideum
#=GS Q54KR1/362-547      DE Cysteine--tRNA ligase, cytoplasmic
#=GS Q54KR1/362-547      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54KR1/362-547      DR GO; GO:0000049; GO:0004817; GO:0005737; GO:0006423; GO:0045335; 
#=GS Q54KR1/362-547      DR EC; 6.1.1.16; 
#=GS D0MY71/399-588      AC D0MY71
#=GS D0MY71/399-588      OS Phytophthora infestans T30-4
#=GS D0MY71/399-588      DE Cysteinyl-tRNA synthetase, putative
#=GS D0MY71/399-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS B8BR45/479-680      AC B8BR45
#=GS B8BR45/479-680      OS Thalassiosira pseudonana
#=GS B8BR45/479-680      DE Cysteinyl-trna synthetase
#=GS B8BR45/479-680      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS F0ZTH4/353-538      AC F0ZTH4
#=GS F0ZTH4/353-538      OS Dictyostelium purpureum
#=GS F0ZTH4/353-538      DE Uncharacterized protein
#=GS F0ZTH4/353-538      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS M4BXK3/262-449      AC M4BXK3
#=GS M4BXK3/262-449      OS Hyaloperonospora arabidopsidis Emoy2
#=GS M4BXK3/262-449      DE Uncharacterized protein
#=GS M4BXK3/262-449      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis; 
#=GS H3H2X5/398-586      AC H3H2X5
#=GS H3H2X5/398-586      OS Phytophthora ramorum
#=GS H3H2X5/398-586      DE Uncharacterized protein
#=GS H3H2X5/398-586      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A0W8D659/401-588  AC A0A0W8D659
#=GS A0A0W8D659/401-588  OS Phytophthora nicotianae
#=GS A0A0W8D659/401-588  DE ATP-binding Cassette (ABC) Superfamily
#=GS A0A0W8D659/401-588  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS W2WSM0/401-588      AC W2WSM0
#=GS W2WSM0/401-588      OS Phytophthora parasitica CJ01A1
#=GS W2WSM0/401-588      DE Cysteine-tRNA ligase
#=GS W2WSM0/401-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS G4YIT7/401-589      AC G4YIT7
#=GS G4YIT7/401-589      OS Phytophthora sojae strain P6497
#=GS G4YIT7/401-589      DE Uncharacterized protein
#=GS G4YIT7/401-589      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A329S4L4/399-588  AC A0A329S4L4
#=GS A0A329S4L4/399-588  OS Phytophthora cactorum
#=GS A0A329S4L4/399-588  DE Cysteine--tRNA ligase, cytoplasmic
#=GS A0A329S4L4/399-588  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS W2Q3G6/401-588      AC W2Q3G6
#=GS W2Q3G6/401-588      OS Phytophthora parasitica INRA-310
#=GS W2Q3G6/401-588      DE Cysteine-tRNA ligase
#=GS W2Q3G6/401-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2ISS9/401-588      AC W2ISS9
#=GS W2ISS9/401-588      OS Phytophthora parasitica
#=GS W2ISS9/401-588      DE Cysteine-tRNA ligase
#=GS W2ISS9/401-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9F014/401-588      AC V9F014
#=GS V9F014/401-588      OS Phytophthora parasitica P1569
#=GS V9F014/401-588      DE Cysteine-tRNA ligase
#=GS V9F014/401-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A081A0G2/401-587  AC A0A081A0G2
#=GS A0A081A0G2/401-587  OS Phytophthora parasitica P1976
#=GS A0A081A0G2/401-587  DE Cysteine-tRNA ligase
#=GS A0A081A0G2/401-587  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2N500/401-587      AC W2N500
#=GS W2N500/401-587      OS Phytophthora parasitica
#=GS W2N500/401-587      DE Cysteine-tRNA ligase
#=GS W2N500/401-587      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2Z2W1/401-588      AC W2Z2W1
#=GS W2Z2W1/401-588      OS Phytophthora parasitica P10297
#=GS W2Z2W1/401-588      DE Cysteine-tRNA ligase
#=GS W2Z2W1/401-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 16
Q54KR1/362-547              --------EMEKTFVEFFHTAKQILRDSPLSLPQFWTQAEKD--LNKHLQNANDQVHQFILDNFNTSDALKTLSDLVNKTNVYIRSCAEQKTNPRLNLISAIAEYITYIFSVFGLTESSTASSMIGF--GSAGKGNIEEE------MTPILNALTQFRSEVRASAIAKD---------TTSILKTCDNLRDEVLPLLGVKIDDKSATTAMWKF
D0MY71/399-588              -----------RFFTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---PTSMLIRSSAEYITRILSIFGLV-TSATD--IGFPLGSGATGGADQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALANTVLRLCDVVRDEKLPYAGVRLEDRSAGAAVWKL
B8BR45/479-680              DQTIDDARSKETTFKSFFREVEALTRDDYLSEEVGWRMEEHDHKLADAYLTARQSVHESLLDNFNTKEAMGALLKVINEANAYLRTANAK---PSVLLLRSIATYITEILKVFGVV-SGSDE--FGF--GSGGSGDGNVESTDGSGSEPFIGAMVSFRESVRNEALEAA-KGGDAQAAIQSILQICDGLRDEVLPKLGVRLEDRPAGT-MWN-
F0ZTH4/353-538              Y-----AIEMEKTFVEFFHTVKQLIRDSPLSNPQFWENAEKD--LEKYLQHTKAEVHRFLMDNFNTSDALKALSELVSKTNVYLRDCNAQKKNPRINLVQTVAEYVTYIFNVFGLVDNSSNS--IGF--GSGVKGNLEEE------MTPILDAITKFRSEVRSSAIAKD---------TASILKTCDTLRDEILPLLGIKMDDKGANGAIWK-
M4BXK3/262-449              -----------RFFTEFFANVKARLRELGVEKTQKWTSVEKA--LHGALLECKEKVFSALSDDINTPLALLHLQQLAKEVNRYMAGDTDK---QTSMLIRASAEYITRILSVFGLT-TSATD--IGFPLSSGATGGADQETV----LTPLLDIFAQFRDEIREAARLAAAE-GDDKNLASVVLRLCDVVRDEKLPYAGVRLEDRSASAAVWK-
H3H2X5/398-586              -----------RFFTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLSKEVNRYMAGDIEK---QASMLIRSCAEYITRILSVFGLV-TSATD--IGFPLSSNAAGGADQETV----LTPVLDIFAQFRDEIREAARSAAADGGDVNALANAILGLCDVVRDEKLPYAGVRLEDRSAGAAVWK-
A0A0W8D659/401-588          -------------FTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWKL
W2WSM0/401-588              -------------FTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWKL
G4YIT7/401-589              -----------RFFTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLECKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRAAAEYITRILSVFGLV-TSATD--IGFPLSSGATGGADQETV----LTPVLDIFAQFRDEIREAARSAAADGGDAKALASAVLRLCDVVRDEKLPYAGVRLEDRSAGAAVWK-
A0A329S4L4/399-588          -----------RFFTEFFANVKARLRELGVEKTQKWTPVEKT--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITHILSIFGLV-TSATD--IGFPLSSGATGGADQETV----LTPVLDIFAQFRDEIREAARSAGAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSAGAAVWKL
W2Q3G6/401-588              -------------FTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWKL
W2ISS9/401-588              -------------FTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWKL
V9F014/401-588              -------------FTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWKL
A0A081A0G2/401-587          -------------FTEFFANVKARLREVGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWK-
W2N500/401-587              -------------FTEFFANVKARLREVGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWK-
W2Z2W1/401-588              -------------FTEFFANVKARLRELGVEKTQKWTPVEKA--LHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEK---QASMLIRSSAEYITRILSIFGLV-TSATD--IGFPLSSGATGGVDQETV----LTPVLDIFAQFRDEIREAARSAAAEGGDPKALASAVLRLCDVVRDEKLPYAGVRLEDRSTGAAVWKL
#=GC scorecons              000000000012294699457754597346544639534975009445654465495547496599439734945755659496544456000544496554969794965799760575450079922696549536493300005695765555995679459445522344233354579559946999499459776797665566971
#=GC scorecons_70           _____________*_***__**___**__*___*_*___**___*___*___*__*___*_**_**__**__*__*__*_*_*______*_______**___*****_**_*****__*_____***___**__*____*_______**_*_____**_***__*________________**__**_****_**__*******_*____**_
#=GC scorecons_80           _____________*__**__**___*_________*___**___*__________*___*_*__**__**__*__*____*_*______________*____*_***_*___***___*______**___*___*____*________*_*_____**___*__*_________________*__**__***_**__***_***______**_
#=GC scorecons_90           _____________*__**_______*_________*___*____*__________*_____*__**__*___*_______*_*______________*____*_*_*_*___**___________**___*___*____*________*_______**___*__*_________________*__**__***_**__*____*_______*__
//