# STOCKHOLM 1.0 #=GF ID 1.20.120.1750/FF/000020 #=GF DE ATP-dependent RNA helicase DEAH12 chloroplastic #=GF AC 1.20.120.1750/FF/000020 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 86.687 #=GS P0CE10/1689-1766 AC P0CE10 #=GS P0CE10/1689-1766 OS Arabidopsis thaliana #=GS P0CE10/1689-1766 DE ATP-dependent RNA helicase DEAH11, chloroplastic #=GS P0CE10/1689-1766 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS P0CE10/1689-1766 DR EC; 3.6.4.13; #=GS F4KGU4/1692-1768 AC F4KGU4 #=GS F4KGU4/1692-1768 OS Arabidopsis thaliana #=GS F4KGU4/1692-1768 DE ATP-dependent RNA helicase DEAH12, chloroplastic #=GS F4KGU4/1692-1768 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F4KGU4/1692-1768 DR EC; 3.6.4.13; #=GS T1EFT8/162-234 AC T1EFT8 #=GS T1EFT8/162-234 OS Helobdella robusta #=GS T1EFT8/162-234 DE RBR-type E3 ubiquitin transferase #=GS T1EFT8/162-234 DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; #=GS A0A0P0X951/1207-1284 AC A0A0P0X951 #=GS A0A0P0X951/1207-1284 OS Oryza sativa Japonica Group #=GS A0A0P0X951/1207-1284 DE Os07g0621500 protein #=GS A0A0P0X951/1207-1284 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0CE10/1823-1900 AC A0CE10 #=GS A0CE10/1823-1900 OS Paramecium tetraurelia #=GS A0CE10/1823-1900 DE Uncharacterized protein #=GS A0CE10/1823-1900 DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; #=GS A0A0R0HLG5/1618-1696 AC A0A0R0HLG5 #=GS A0A0R0HLG5/1618-1696 OS Glycine max #=GS A0A0R0HLG5/1618-1696 DE Uncharacterized protein #=GS A0A0R0HLG5/1618-1696 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A3N7F400/1637-1713 AC A0A3N7F400 #=GS A0A3N7F400/1637-1713 OS Populus trichocarpa #=GS A0A3N7F400/1637-1713 DE Uncharacterized protein #=GS A0A3N7F400/1637-1713 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS R0GSC1/1721-1798 AC R0GSC1 #=GS R0GSC1/1721-1798 OS Capsella rubella #=GS R0GSC1/1721-1798 DE Uncharacterized protein #=GS R0GSC1/1721-1798 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7M2W4/1693-1770 AC D7M2W4 #=GS D7M2W4/1693-1770 OS Arabidopsis lyrata subsp. lyrata #=GS D7M2W4/1693-1770 DE Uncharacterized protein #=GS D7M2W4/1693-1770 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A1D6IJX7/1668-1748 AC A0A1D6IJX7 #=GS A0A1D6IJX7/1668-1748 OS Zea mays #=GS A0A1D6IJX7/1668-1748 DE ATP-dependent RNA helicase DEAH12 chloroplastic #=GS A0A1D6IJX7/1668-1748 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A3L6QPM8/1254-1331 AC A0A3L6QPM8 #=GS A0A3L6QPM8/1254-1331 OS Panicum miliaceum #=GS A0A3L6QPM8/1254-1331 DE Uncharacterized protein #=GS A0A3L6QPM8/1254-1331 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A1W0W7A7/1433-1511 AC A0A1W0W7A7 #=GS A0A1W0W7A7/1433-1511 OS Sorghum bicolor #=GS A0A1W0W7A7/1433-1511 DE Uncharacterized protein #=GS A0A1W0W7A7/1433-1511 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A445FMR4/1649-1726 AC A0A445FMR4 #=GS A0A445FMR4/1649-1726 OS Glycine soja #=GS A0A445FMR4/1649-1726 DE ATP-dependent RNA helicase DEAH12, chloroplastic isoform A #=GS A0A445FMR4/1649-1726 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A0E0QBF0/1653-1729 AC A0A0E0QBF0 #=GS A0A0E0QBF0/1653-1729 OS Oryza rufipogon #=GS A0A0E0QBF0/1653-1729 DE Uncharacterized protein #=GS A0A0E0QBF0/1653-1729 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0AMU3/1653-1729 AC A0A0E0AMU3 #=GS A0A0E0AMU3/1653-1729 OS Oryza glumipatula #=GS A0A0E0AMU3/1653-1729 DE Uncharacterized protein #=GS A0A0E0AMU3/1653-1729 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0D3GTP4/1619-1695 AC A0A0D3GTP4 #=GS A0A0D3GTP4/1619-1695 OS Oryza barthii #=GS A0A0D3GTP4/1619-1695 DE Uncharacterized protein #=GS A0A0D3GTP4/1619-1695 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0EEH7/1658-1734 AC A0A0E0EEH7 #=GS A0A0E0EEH7/1658-1734 OS Oryza meridionalis #=GS A0A0E0EEH7/1658-1734 DE Uncharacterized protein #=GS A0A0E0EEH7/1658-1734 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0LNH5/1656-1732 AC A0A0E0LNH5 #=GS A0A0E0LNH5/1656-1732 OS Oryza punctata #=GS A0A0E0LNH5/1656-1732 DE Uncharacterized protein #=GS A0A0E0LNH5/1656-1732 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS I1QCA5/1174-1251 AC I1QCA5 #=GS I1QCA5/1174-1251 OS Oryza glaberrima #=GS I1QCA5/1174-1251 DE RBR-type E3 ubiquitin transferase #=GS I1QCA5/1174-1251 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS J3MN27/1720-1795 AC J3MN27 #=GS J3MN27/1720-1795 OS Oryza brachyantha #=GS J3MN27/1720-1795 DE Uncharacterized protein #=GS J3MN27/1720-1795 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; #=GS A0A1D6IJY0/1575-1655 AC A0A1D6IJY0 #=GS A0A1D6IJY0/1575-1655 OS Zea mays #=GS A0A1D6IJY0/1575-1655 DE ATP-dependent RNA helicase DEAH12 chloroplastic #=GS A0A1D6IJY0/1575-1655 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6IJX6/1635-1715 AC A0A1D6IJX6 #=GS A0A1D6IJX6/1635-1715 OS Zea mays #=GS A0A1D6IJX6/1635-1715 DE ATP-dependent RNA helicase DEAH12 chloroplastic #=GS A0A1D6IJX6/1635-1715 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6IJX8/1276-1355 AC A0A1D6IJX8 #=GS A0A1D6IJX8/1276-1355 OS Zea mays #=GS A0A1D6IJX8/1276-1355 DE ATP-dependent RNA helicase DEAH12 chloroplastic #=GS A0A1D6IJX8/1276-1355 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1B6QFL3/1365-1443 AC A0A1B6QFL3 #=GS A0A1B6QFL3/1365-1443 OS Sorghum bicolor #=GS A0A1B6QFL3/1365-1443 DE Uncharacterized protein #=GS A0A1B6QFL3/1365-1443 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A1D6IJY3/1530-1610 AC A0A1D6IJY3 #=GS A0A1D6IJY3/1530-1610 OS Zea mays #=GS A0A1D6IJY3/1530-1610 DE ATP-dependent RNA helicase DEAH12 chloroplastic #=GS A0A1D6IJY3/1530-1610 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1LNH6/1655-1733 AC I1LNH6 #=GS I1LNH6/1655-1733 OS Glycine max #=GS I1LNH6/1655-1733 DE Uncharacterized protein #=GS I1LNH6/1655-1733 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS I1MYP1/1649-1726 AC I1MYP1 #=GS I1MYP1/1649-1726 OS Glycine max #=GS I1MYP1/1649-1726 DE Uncharacterized protein #=GS I1MYP1/1649-1726 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0R0HLH1/1175-1253 AC A0A0R0HLH1 #=GS A0A0R0HLH1/1175-1253 OS Glycine max #=GS A0A0R0HLH1/1175-1253 DE Uncharacterized protein #=GS A0A0R0HLH1/1175-1253 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS B9H4Q2/1664-1740 AC B9H4Q2 #=GS B9H4Q2/1664-1740 OS Populus trichocarpa #=GS B9H4Q2/1664-1740 DE Uncharacterized protein #=GS B9H4Q2/1664-1740 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GF SQ 29 P0CE10/1689-1766 PLITCERYKKFKENP-DLSLKDWAKGK--DVKECPICKSTIEKTDGCNHLQC-RCGKHICWTCLDVFTQAEPCYAHLRTIHG-- F4KGU4/1692-1768 PLITCERYKKFKENP-DLSLKDWAKGK--NVKECPICKSTIEKTDGCNHMKC-RCGKHICWTCLDVFTQEEPCYAHLRTIH--- T1EFT8/162-234 ---------KCAYNAADETLRSWIDEDELNRSICPKCSFGIEKNGGCNHMTCSNCKTHICWVCKMIFDASGPCYDHMRQVHG-- A0A0P0X951/1207-1284 PFISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDDCYSHLRSVH--- A0CE10/1823-1900 PQISCEEAKKLFIDGKDLDESELL--KM-NIKRCPKCQMGVQKNEGCLHLHCTNCENHFCWVCLHQANLSQDIYAHLRSQH--- A0A0R0HLG5/1618-1696 PYLSCERYQEFKEDP-DSSLKEWCRGKE-QVKCCSACGYVIEKVDGCNHVEC-KCGKHVCWVCLEFFSTSNDCYNHLRTIHL-- A0A3N7F400/1637-1713 --LSCKKYMEFKEDP-DLSLKDWCKGKE-NVKSCPVCGYTIEKGEGCNHVEC-KCGGHVCWVCLESYNNSEDCYNHLRSMHG-- R0GSC1/1721-1798 PLITCERYKQFKENP-DLSLKDWAKGK--DVKECPICKSTIEKSFGCNHLQC-RCGKHICWTCLDVFTHSEPCYAHLRAVHG-- D7M2W4/1693-1770 PLITCERYKKFKENP-DLSLKDWAKGK--DVKECPICKSTIEKSDGCNHLQC-RCGKHICWTCLDVFTQAEPCYAHLRTIHG-- A0A1D6IJX7/1668-1748 PFISCEAYKEYKADP-DATMLEWRKGKE-NVKNCPSCGFTIEKSEGCNHVEC-RCGSHICWNCLENFKSSEECYGHLRSVHLSY A0A3L6QPM8/1254-1331 PFISCEAYKEYKADP-DATLREWRKGKE-NVKSCPSCGYTIEKTEGCNHVEC-RCGSHICWACLENFKSSEECYSHLRSVH--- A0A1W0W7A7/1433-1511 PFISCEAYKEYKADPADATLLQWRKGKE-NVKNCPKCGYTIEKAEGCNHVEC-RCGCHICWNCLENFKSSEECYGHLRSVH--- A0A445FMR4/1649-1726 PYLSCERYKEFKEDP-DSSLIEWCRGKE-QVKCCSACGYVIEKVDGCNHVEC-KCGKHVCWVCLEFFSTSNDCYDHLRTIH--- A0A0E0QBF0/1653-1729 -FISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDDCYSHLRSVH--- A0A0E0AMU3/1653-1729 -FISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDDCYSHLRSVH--- A0A0D3GTP4/1619-1695 -FISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDDCYSHLRSVH--- A0A0E0EEH7/1658-1734 -FISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDDCYSHLRSVH--- A0A0E0LNH5/1656-1732 -FISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDECYSHLRSVH--- I1QCA5/1174-1251 PFISCEAYKEYKEDP-DATLLEWRKGKE-NVKVCPSCHFTIEKADGCNHVEC-KCGSHICWACLENFRSSDDCYSHLRSVH--- J3MN27/1720-1795 --ISCETYKEYKEDP-DATLLEWRKGKD-NVKVCPSCGFTIEKADGCNHVEC-RCGSHICWACLESFRSSDECYGHLRSVH--- A0A1D6IJY0/1575-1655 PFISCEAYKEYKADP-DATMLEWRKGKE-NVKNCPSCGFTIEKSEGCNHVEC-RCGSHICWNCLENFKSSEECYGHLRSVHLSY A0A1D6IJX6/1635-1715 PFISCEAYKEYKADP-DATMLEWRKGKE-NVKNCPSCGFTIEKSEGCNHVEC-RCGSHICWNCLENFKSSEECYGHLRSVHLSY A0A1D6IJX8/1276-1355 PFISCEAYKEYKADP-DATMLEWRKGKE-NVKNCPSCGFTIEKSEGCNHVEC-RCGSHICWNCLENFKSSEECYGHLRSVHLS- A0A1B6QFL3/1365-1443 PFISCEAYKEYKADPADATLLQWRKGKE-NVKNCPKCGYTIEKAEGCNHVEC-RCGCHICWNCLENFKSSEECYGHLRSVH--- A0A1D6IJY3/1530-1610 PFISCEAYKEYKADP-DATMLEWRKGKE-NVKNCPSCGFTIEKSEGCNHVEC-RCGSHICWNCLENFKSSEECYGHLRSVHLSY I1LNH6/1655-1733 PYLSCERYQEFKEDP-DSSLKEWCRGKE-QVKCCSACGYVIEKVDGCNHVEC-KCGKHVCWVCLEFFSTSNDCYNHLRTIHL-- I1MYP1/1649-1726 PYLSCERYKEFKEDP-DSSLIEWCRGKE-QVKCCSACGYVIEKVDGCNHVEC-KCGKHVCWVCLEFFSTSNDCYDHLRTIH--- A0A0R0HLH1/1175-1253 PYLSCERYQEFKEDP-DSSLKEWCRGKE-QVKCCSACGYVIEKVDGCNHVEC-KCGKHVCWVCLEFFSTSNDCYNHLRTIHL-- B9H4Q2/1664-1740 --LSCKKYMEFKEDP-DLSLKDWCKGKE-NVKSCPVCGYTIEKGEGCNHVEC-KCGGHVCWVCLESYNNSEDCYNHLRSMHG-- #=GC scorecons 436676465666477094564683678506783974945588946997966906974969949763744755894989569100 #=GC scorecons_70 ____**_*_***_**_*__*_**__**__***_**_*___***__*****_*__**_****_**__*__*__**_***__*___ #=GC scorecons_80 ____*_________*_*_____*___*___**_**_*___***__****__*__**_*_**_**__*__*__**_***__*___ #=GC scorecons_90 ________________*_________*______*__*___***__**_*__*__*__*_**_*__________*_***__*___ //