# STOCKHOLM 1.0
#=GF ID 1.20.120.1080/FF/000031
#=GF DE ATP-dependent RNA helicase
#=GF AC 1.20.120.1080/FF/000031
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.559
#=GS Q06698/1021-1149      AC Q06698
#=GS Q06698/1021-1149      OS Saccharomyces cerevisiae S288C
#=GS Q06698/1021-1149      DE Putative ATP-dependent RNA helicase YLR419W
#=GS Q06698/1021-1149      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q06698/1021-1149      DR GO; GO:0003729; GO:0005737; GO:0005739; 
#=GS Q06698/1021-1149      DR EC; 3.6.4.13; 
#=GS D0NFX9/988-1095       AC D0NFX9
#=GS D0NFX9/988-1095       OS Phytophthora infestans T30-4
#=GS D0NFX9/988-1095       DE ATP-dependent RNA helicase, putative
#=GS D0NFX9/988-1095       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS H3GFK4/1141-1244      AC H3GFK4
#=GS H3GFK4/1141-1244      OS Phytophthora ramorum
#=GS H3GFK4/1141-1244      DE Uncharacterized protein
#=GS H3GFK4/1141-1244      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS G4Z152/1013-1117      AC G4Z152
#=GS G4Z152/1013-1117      OS Phytophthora sojae strain P6497
#=GS G4Z152/1013-1117      DE Uncharacterized protein
#=GS G4Z152/1013-1117      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A0W8CRN5/1132-1237  AC A0A0W8CRN5
#=GS A0A0W8CRN5/1132-1237  OS Phytophthora nicotianae
#=GS A0A0W8CRN5/1132-1237  DE ATP-dependent RNA helicase DHX29
#=GS A0A0W8CRN5/1132-1237  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS W2LIP3/1186-1291      AC W2LIP3
#=GS W2LIP3/1186-1291      OS Phytophthora parasitica
#=GS W2LIP3/1186-1291      DE Uncharacterized protein
#=GS W2LIP3/1186-1291      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A3R7JDJ4/1261-1363  AC A0A3R7JDJ4
#=GS A0A3R7JDJ4/1261-1363  OS Phytophthora kernoviae
#=GS A0A3R7JDJ4/1261-1363  DE Uncharacterized protein
#=GS A0A3R7JDJ4/1261-1363  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS A0A329SCN2/1180-1284  AC A0A329SCN2
#=GS A0A329SCN2/1180-1284  OS Phytophthora cactorum
#=GS A0A329SCN2/1180-1284  DE ATP-dependent RNA helicase
#=GS A0A329SCN2/1180-1284  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS A0A225WZV7/1052-1154  AC A0A225WZV7
#=GS A0A225WZV7/1052-1154  OS Phytophthora megakarya
#=GS A0A225WZV7/1052-1154  DE ATP-dependent RNA helicase
#=GS A0A225WZV7/1052-1154  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora megakarya; 
#=GS Q5ADM3/978-1078       AC Q5ADM3
#=GS Q5ADM3/978-1078       OS Candida albicans SC5314
#=GS Q5ADM3/978-1078       DE Putative helicase
#=GS Q5ADM3/978-1078       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q757B9/998-1105       AC Q757B9
#=GS Q757B9/998-1105       OS Eremothecium gossypii ATCC 10895
#=GS Q757B9/998-1105       DE AER094Cp
#=GS Q757B9/998-1105       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XEZ0/998-1105       AC R9XEZ0
#=GS R9XEZ0/998-1105       OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XEZ0/998-1105       DE AaceriAER094Cp
#=GS R9XEZ0/998-1105       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS A7A1U0/1021-1149      AC A7A1U0
#=GS A7A1U0/1021-1149      OS Saccharomyces cerevisiae YJM789
#=GS A7A1U0/1021-1149      DE Conserved protein
#=GS A7A1U0/1021-1149      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS W2RAN0/1172-1277      AC W2RAN0
#=GS W2RAN0/1172-1277      OS Phytophthora parasitica INRA-310
#=GS W2RAN0/1172-1277      DE Uncharacterized protein
#=GS W2RAN0/1172-1277      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2NM72/1186-1291      AC W2NM72
#=GS W2NM72/1186-1291      OS Phytophthora parasitica
#=GS W2NM72/1186-1291      DE Uncharacterized protein
#=GS W2NM72/1186-1291      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2ZKN6/1186-1291      AC W2ZKN6
#=GS W2ZKN6/1186-1291      OS Phytophthora parasitica P10297
#=GS W2ZKN6/1186-1291      DE Uncharacterized protein
#=GS W2ZKN6/1186-1291      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9FI92/1186-1291      AC V9FI92
#=GS V9FI92/1186-1291      OS Phytophthora parasitica P1569
#=GS V9FI92/1186-1291      DE Uncharacterized protein
#=GS V9FI92/1186-1291      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2H4D7/1186-1291      AC W2H4D7
#=GS W2H4D7/1186-1291      OS Phytophthora parasitica
#=GS W2H4D7/1186-1291      DE Uncharacterized protein
#=GS W2H4D7/1186-1291      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2XB06/1172-1277      AC W2XB06
#=GS W2XB06/1172-1277      OS Phytophthora parasitica CJ01A1
#=GS W2XB06/1172-1277      DE Uncharacterized protein
#=GS W2XB06/1172-1277      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A081AIY1/1186-1291  AC A0A081AIY1
#=GS A0A081AIY1/1186-1291  OS Phytophthora parasitica P1976
#=GS A0A081AIY1/1186-1291  DE Uncharacterized protein
#=GS A0A081AIY1/1186-1291  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 20
Q06698/1021-1149              IKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDSSIK
D0NFX9/988-1095               --GCGEFLRACLDPPDDASIQDALEELFEIGALSRQDEALTKLGAHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASDLL-----------------
H3GFK4/1141-1244              --GCGEFLRACLDPPDEASIRDALEELFEIGALNREDEALTKLGAHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQNEMKQVRQNFAIGA---------------------
G4Z152/1013-1117              --GCGEFLRACLDPPDDVSIRDALEELFEIGALKREDESLTKLGAHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAIGAS--------------------
A0A0W8CRN5/1132-1237          --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
W2LIP3/1186-1291              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
A0A3R7JDJ4/1261-1363          --GCGEFLRACIDPPDDVSIQDALEELFEIGALNREDEALTKLGAHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQNEMKQARQSFAVG----------------------
A0A329SCN2/1180-1284          --GCGEFLRACLDPPDEVSIQDALEELFEIGALDREDEALTKLGAHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSDMKQARQTFTVGAS--------------------
A0A225WZV7/1052-1154          --GCGEFLRACLDPPDDGSICDALEELFEIGALDRENEALTKLGGHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAILETK-SPFVAPFGRQSEMKQARQNFAVG----------------------
Q5ADM3/978-1078               -SNVNEFLSSGLDAPDKSSLDKANQFLHEIGAL--QENSLTKLGNYISYLPT-DPQSAKLLILGCIFGCLDICLTLAAISSTG-SPFINSYEQRDKLKQIQKKFGN-----------------------
Q757B9/998-1105               -NDVIKFLGTGIDPPPMNSILKAEQMLTTTGLLDESGKSLTELGRYISLMPVMDSKHGKLLIYSIIFGCTDLGVLIASVLSIGMTPFIAPFENRDKIKSILSRYKHKGD--------------------
R9XEZ0/998-1105               -KDVIKFLGTGIDPPPMNAIIKAEQMLTTTGLLDESGKSLTELGKYISLMPVMDSKHGKLLIYSIIFGCTDLGVLIASVLSIGMTPFVAPFENRDRIKSILSRYKHKGD--------------------
A7A1U0/1021-1149              IKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDSSIK
W2RAN0/1172-1277              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
W2NM72/1186-1291              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
W2ZKN6/1186-1291              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
V9FI92/1186-1291              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
W2H4D7/1186-1291              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTGAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
W2XB06/1172-1277              --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTGAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
A0A081AIY1/1186-1291          --GCGEFLRACLDPPDDSSIQDALEELFEIGALNREDEALTKLGEHLARLPV-DVKVGKLLLLGALFGVFDAASTCAAVLETK-SPFVAPFGRQSEMKQARQTFAVAASD-------------------
#=GC scorecons                015545994547969534664594539457957444656995994666469719584899965756995495555376775650599765865645695444474334310000000000000000000
#=GC scorecons_70             ______**___****___**__*___*__**_*___*__**_**__*__***_*_*_*****_*_***__*_____*_**_____***__*__*__**_____*_________________________
#=GC scorecons_80             ______**___**_*_______*___*__**_*______**_**______**_*_*_****__*__**__*_______**_____**___*______*_____*_________________________
#=GC scorecons_90             ______**____*_*_______*___*___*________**_**______*__*_*__***_____**__*______________**___*______*_______________________________
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