# STOCKHOLM 1.0 #=GF ID 1.20.1070.10/FF/000345 #=GF DE 40S ribosomal protein S27 #=GF AC 1.20.1070.10/FF/000345 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 95.542 #=GS W4XVI7/24-348 AC W4XVI7 #=GS W4XVI7/24-348 OS Strongylocentrotus purpuratus #=GS W4XVI7/24-348 DE Uncharacterized protein #=GS W4XVI7/24-348 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS W4YWD4/26-346 AC W4YWD4 #=GS W4YWD4/26-346 OS Strongylocentrotus purpuratus #=GS W4YWD4/26-346 DE Uncharacterized protein #=GS W4YWD4/26-346 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS W4XUU4/21-336 AC W4XUU4 #=GS W4XUU4/21-336 OS Strongylocentrotus purpuratus #=GS W4XUU4/21-336 DE Uncharacterized protein #=GS W4XUU4/21-336 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS W4YF51/2-217_249-360 AC W4YF51 #=GS W4YF51/2-217_249-360 OS Strongylocentrotus purpuratus #=GS W4YF51/2-217_249-360 DE Uncharacterized protein #=GS W4YF51/2-217_249-360 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS W4Y6A0/60-378 AC W4Y6A0 #=GS W4Y6A0/60-378 OS Strongylocentrotus purpuratus #=GS W4Y6A0/60-378 DE Uncharacterized protein #=GS W4Y6A0/60-378 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS B3RM94/1-267 AC B3RM94 #=GS B3RM94/1-267 OS Trichoplax adhaerens #=GS B3RM94/1-267 DE Uncharacterized protein #=GS B3RM94/1-267 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; #=GS C3Y4N0/2-316 AC C3Y4N0 #=GS C3Y4N0/2-316 OS Branchiostoma floridae #=GS C3Y4N0/2-316 DE Uncharacterized protein #=GS C3Y4N0/2-316 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3YZ39/24-328 AC C3YZ39 #=GS C3YZ39/24-328 OS Branchiostoma floridae #=GS C3YZ39/24-328 DE Uncharacterized protein #=GS C3YZ39/24-328 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3ZZL5/1-276 AC C3ZZL5 #=GS C3ZZL5/1-276 OS Branchiostoma floridae #=GS C3ZZL5/1-276 DE Uncharacterized protein #=GS C3ZZL5/1-276 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3ZTG6/18-308 AC C3ZTG6 #=GS C3ZTG6/18-308 OS Branchiostoma floridae #=GS C3ZTG6/18-308 DE Uncharacterized protein #=GS C3ZTG6/18-308 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3Z7V8/13-334 AC C3Z7V8 #=GS C3Z7V8/13-334 OS Branchiostoma floridae #=GS C3Z7V8/13-334 DE Uncharacterized protein #=GS C3Z7V8/13-334 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3Y9H9/2-287 AC C3Y9H9 #=GS C3Y9H9/2-287 OS Branchiostoma floridae #=GS C3Y9H9/2-287 DE Uncharacterized protein #=GS C3Y9H9/2-287 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3ZLQ9/37-373 AC C3ZLQ9 #=GS C3ZLQ9/37-373 OS Branchiostoma floridae #=GS C3ZLQ9/37-373 DE Uncharacterized protein #=GS C3ZLQ9/37-373 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3ZLR0/29-346 AC C3ZLR0 #=GS C3ZLR0/29-346 OS Branchiostoma floridae #=GS C3ZLR0/29-346 DE Uncharacterized protein #=GS C3ZLR0/29-346 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3YX09/364-690 AC C3YX09 #=GS C3YX09/364-690 OS Branchiostoma floridae #=GS C3YX09/364-690 DE Uncharacterized protein #=GS C3YX09/364-690 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS C3ZJE5/224-566 AC C3ZJE5 #=GS C3ZJE5/224-566 OS Branchiostoma floridae #=GS C3ZJE5/224-566 DE 40S ribosomal protein S27 #=GS C3ZJE5/224-566 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GF SQ 16 W4XVI7/24-348 E-SKLNHSNETGNDGDDD-------DVKQWVFLFLTIIAMVMGLVGNVLIIGAVFAERRLRVLSNAFIVNLAVADLFVSTIINAFALVGLFK-GEAYFE---SHYLLCNFIGATCIICCVCSLWCIASIAFNRYIAISHRL-SYRR---------IYNKGNLWIHLLVPWLAGVLLDIPNLTGWNSHKFIEEYMMCTYDIRGDLSYVLFL--KIMAVGVPLVVISFSYIGIYAYAHSSGH-----ELKKFAGSSCVKSQVKRK---------LRQSDAKLLRSIFILVLAYAIFWFPETLLT-LVDQAHEVPDSVYMSVAFLAHFNSSVNSIIYGLTNENFRKGYRKFLFVVLKCRRVDCSFNP--------------------- W4YWD4/26-346 ---------DDDIEEVVG-------SSYSVPLLVAYIMFALFGCIGNILVIGAVFVHHKLRVLSNTFLVNLAVADLSVSAVINGFGILGLV--NVRFFE---DKPALCEIIGIVCVTSCCGSLWSLASIAINRYIAICHRD-LYRR---------IYTRRTMPLHLLLIWTVCFLADIPNLFGMGDHEFDPVLLVCTFDYRESYNYNIFL--FILAFCLPMVFISWSYVRIFTYAKGISR-----ELRNLQIDKDDEKNNKKQYK-------IRVTDRRLLRTIMMLVIFFSLMWAPFSLIV-VIDRDTSFPALVYILAASLSHTNSSINWLLYCATNKNFREGYRTFICKICLCGLVKTKKNFSID------------------ W4XUU4/21-336 --SGWQSHNETMDERVHD-------EKIYKAILVWTITIMFTGILGNVLVISAVLLHRNLRKIENVFIVNLAVADMGVSLIVNTFCIVGIVT-KAEFFI---GKDWLCEAIGVICITCCACSMWSIAAIGVNRYVIICHWA-RYNS---------IYNRRTVPFMLLAVWSISFFIDLPNMVGWGDHRFDWKTMVCTADMAIDYSYTIYF--SCMGFGVPLCFIIYSYVRIYYHAWKSSA-----RLNRVAKE----DGLSNR----------HTNDMRLARSLLCIVIFFIAMWAPYSLTV-IIDRHSVAHRYIYIFTALLAHTNSSINCLLYGATNRNFRQGYMYFF-RFILCRDVEFSA----------------------- W4YF51/2-217_249-360 ----TQYHNPYSDQVV-----------VHTIVQVWTTINAMIGTCGNIMIIAAVSLHHKLRNIGNVFIINLALADLGVSIVVNLASVVGSITNEAGFFF---KHDWLCELVAVICIVTCSCSLWSIATIAFNRYVWICHWN-NYHR---------IFNRRTVPLILLIVWGIAFLIDLPNILGWGVHEFDWKVMSCTGGMAFVHSYALFF--ASTTFVLPLFIITYSYVGIFRFSHRASA-----AIRRMQRQLSTAHTAQNRFN-RGALRGASASDLRLARSIFIIVIMYLVMWLPFSMTI-LFDTQKVANRNIYLFTFTLAHMNSSVNCVIYGATNQNFRRGYIRFL-RFMMCKAKRFNPLTST------------------- W4Y6A0/60-378 ------DEASLLEEAKKN-------SSSFYALLLYTGWMYVFTMIFNCLKTNSCYV----SISGNLFIVNLALADLGVSVVVNLASVAGSITSEEGIFL---KYEWLCEVIAVVCIVTCSCSLWSIAAIAFNRYVWICHWQ-RYRK---------IFNRRTVPMMIAGLWFIGFLIDLPNILGWGTHTFDWKVMSCTGGMSFVYSYAIFF--AMTAFAIPLMIITFSYIGIFRFARNAAI-----ALDRMREN----NGVQNKNDKRKPGRAARPADLRLARSVLVIVIIYLAMWTPYSLTV-LIDHRVVYDRKLYILSYTLAHTNSSFNCVIYGATNQQFRRGYMHFI-RLLFCRAKKVDL----------------------- B3RM94/1-267 -----------------------------------------------------MVTYSKLQNVTNIMIFNLALADLIVGIVIIPAVLSSTI--IGEWI----GDATSCKVIGILNASILVVSVWMLVVISIIRYVLVAFPH-RSHT---------LLTKRKAYAVVVLLWIWSFVSAATAEL-WSPYYYHPQIFDCWFDYSIPFKHQFLM--ILINILLPLSIMIFAYIKIYLILRKQYR-----------------NALGNRLP-L----ARLKDDAKVTRMMFIVLLAFLLAWSPGAFILQFFFFIQPVSPFILNLVFIVGYSNSAINCFIYGFLNKTFRHSFERILTCHKCRKSTNSS------------------------ C3Y4N0/2-316 -------------AVVET-------ELPRVLMIILVVILILLGTVGNLSIILVISLTKDLWTTTNTFIINLAIADLFVTIIVDPYNVVGIH--TDQYLL---DHPVQCEVVGSICVITCSVSLATVAAISFNRYLFVCHNP-LHDRVCIYSLPYQIFTKKWCGVIVVCLWLYGGLVDVPLHFGWGSHGYDLKTMGCTYDRAHTYGYTLYL--VVMIVIIPLLTVVYSYTNVYMFARSSRQ-----RLV--------GAMNEAK---------VKQDDLKLIKTLVIMCVTFFFCWSPYAIVV-LADFEDHWPQTVHFLALIMAHASSSINCIIYGFTNDKFRRGLFHLVGK----GRVQAGSGEVLHANH--------------- C3YZ39/24-328 --DSALLDDYYDIEEV--------SMGVKIGSTVLLAVLITGGTFGNCLIISAVYTTPSLRTVSNIFIVNLAVADLMVSSIVDTFNIVGIL--DQRFLQ---DHPVVCEVVGVICMTSCICSLYSVSNISINRLLFVVKPH-WHSS---------VYTKPKTLMIVAVSWFYSFLFDLPLLLGWGRHSYDIKTMGCTYDRTHTFSYTLFL--VIAGISLPLAVVVCSYSKIFYHVHQSKV-----RVA--------VHLANPKGN-M--NNNVNYEEIRLIKTLVAVCVMFYICWLPYAVVV-LADFDDHWPRAVHFMATIMAHGSSSVNCLVYGFMNKKFKTNMNNNV------------------------------------ C3ZZL5/1-276 ----------------------------------LVIFWMVTGCVGNVLVMAAIATHKRLRTLANIFVVNLAIADIIVSSIINVFTIISIMS-DGEYWE---MRPMLCDVIGGMCVIVCVCSMYNIAAIAANRYIAICHNS-YYHD---------IYTHRKTVLMAISLWVLCTLLDLPNFLGWGGHHYDRKTMICSYNHLADYSYTLFL--ILLGLGLPMGVVIFCYICLYIHSLKVS-----------------EHSKKKGWG-R-----MTNSDIRLLKTLLVIFISFALCWTPYGVIF-LVDSKGQWPKPVYVMAIILAHLNSSMNSVIYGVMNRSFRQAYIALF-R---------------------------------- C3ZTG6/18-308 ---------NATVAVNGT------MVAETVAMGSLVVLLTVFGIPGNLVIVISMVINPKLQTVANIFVLNIAAADLSVILLL-LFCVPALG--YGHWPTA--LGSVGCSIFGFLFTACCIASTYSLAATALNRWCLIVYPS-RYHK---------TFTMRRSVTILAGLWVLAVVLSIPLVAGWGAIKYKPEIFMCTFDTNGAVPYTIFI--VVAGTIIPLAVTAKCYIQLFWTA----------------------------------------DKQRLGKKLLAALIVFVTCWGPYAVGM-LVATSRPVEGWVHVVTMWLALIESGLNAIIYGFMNSQLQAAYKEMFTRWKAVRKEKASSPE--------------------- C3Z7V8/13-334 V-STKPIMGPSNVTIPNG------EFNEQAFQVSIVSVMAVVGTVGNSVILGLLLTICRGDTTATPFVISLTVADLVVSLVIDSFHIKGIL--HPEFFI---EHVYVCRTVGSLCVAGCIASLATAAVISINRYLCVCKRA-LHDA---------VFTNRGNALIVSVVWVYGALYVIPLWIGYGGVRYDLKTKNCMYDRT-NIVFTLIF--IIVGHLIPTVAVFAANTKLFLYVRNVKG-----KVK--------SPVVRGK---------LLKDEMKVFKSLGILCVYFVLSWLQYAVIV-VSDPADDWPAAAHFLSLVIAHTSSSLNAVLFAATNSNMKKKVKKLC-RFTKCSAKHGIRDTTDQMNTF-------------- C3Y9H9/2-287 ---------EMDLSIY--------SSHVRTWLAALVGCLGVFGTGVNLVVLWVLYRRKDIRTSATVYVVNLTAVDLLVTIVVDTLHVLGIA--WPEFYRLD-TNWTVCDITGSLCVAGCIISLATTAVITINRYLFICKRQ-THDD---------IFTKKGAAMIVLGTWVYGLGFVLPLWFGWGTFRYDPKTMNCAYDRT-KTGYTLMF--LLIGHLLPTLTVFVFNTALYLNVMKIKN-----NLR---------QYLQGRTP-P-----QVRQGTKALRSLSVLCIYFVVCWLQYAVIV-LADPGDKWPGGVHFSSLVLAHSSSSLNGVIFALTDKK--------------------------------------------- C3ZLQ9/37-373 -----SSTNDSTIDALPTPASPQPTQGFIVGVAMVMGLLALVGTSLNGTVIFAVGFNKRLRTATGWFVANLAAGDLLETTVYLPFGVYTVI--THRVP----IHPSVCAALATIGISSKFTSLSCMALIAFHRYMLITKPKSTYKA---------VFTARNNVLIVLLAWLVSWTTAIPFVLGYGFIRT-PSIGICVPATGSVLTTRRAV--TGTLYALPLLTMLYSYTSIYLYVRKAPY-----NPD--------NPCIQLQ---------QKKNMLKVAKNLAVLACVFCVLVFPSCI---LVVFGAGWPASANALVWIMYYANCCINAFMHIRNNSDFKKVCRKIFFCRPPQREQNQDGPRQARLGQPVDQTVQANRVRTLI C3ZLR0/29-346 ---TLFSTNDSSVTAVSTPASPR-SMGAVVGVAMVMGLLAVVGTALNGTVIFAVGFNKRLRTATSWFVVNLAAGDLLETAVYLPFGVYTVI--THRVP----FHPSVCAALATIGISNKFTSLSCMALIAFHRYMLITKPRSTYKA---------FFTARNNVLIVLLAWLVSWTAAIPFVLGYGFLGM-LSIGVCVAWTGPVLAT-RAV--IGTLYALPLLTMLYSYTAIYRHVRNASY-----NPN--------NPSIQNQ---------QKKNMLKVSKNLAVLACVFCVLVGPSCV---FVASGMDWPPPVSSIVWIMYYANCCINSYLHIRKNSDFKKTCRRMLMRSPPQRQQNEDCPRQA------------------- C3YX09/364-690 --RRSFKANATGAHGNMSNLSIW-HWGLFEYVSLYIDFAGMIGIIANLLNSLAIMTTRKLQNSSNAFILNLSFLDILVACL-------GLVV-RLQVFMPKWVPGDACEAVGALTCIALATSAVNLAAIAVNRYYLVTRGPLEYRR---------AFSKRRTGVYILLVWVIGVTFNLPPILGFGRYGYNEKTQMCTFVYRDRRMYFHLFLGTIFGFGGVVLTVGVCYLKIYLVLRRLRRLRPGVRLPRHAW----TDVITSRLH-Q-----IERQDAKLVTSLFFVCCGFCVCWLPLLMTI-LVDYNFDAPPAAYLPGVMLLFTHPVVNPLIYLWVNKTYRQAYKRILCCRKKC--------------------VDW------- C3ZJE5/224-566 CFHHEEEANATGAHVNMSNLSIW-HWGLFEYVSLYIDFAGMIGIIANLLNSLAIMTTRKLQNSSNAFILNLSFLDILVACL-------GLVV-RLQVFMPKWVPGDACEAVGALTCIALATSAVNLAAIAVNRYYLVTRGPLEYRR---------AFSKRRTGVYILLVWVIGVIFNLPPILGFGRYGYNEKTQMCTFVYRDRRMYFHMFLGTIFGFGGVVLTVGVCYLKIYLVLRRLRRLRPGARLPRHAW----TDAITTRLH-Q-----IERQDAKLVTSLFFVCCGFCVCWLPLLMTI-LVDYNFDAPPAAYLPGVMLLFTHPVVNPLIYLWVNKTYRQAYKKILCCRKKDKKTQASYSSTTP------KALSH------- #=GC scorecons 0000001122222222110000000122221323333333437433734442452333465434637658864597374363224242544002244410002432494456354443433953447485469743744330264300000000057546333445534943434345833575724364254339544331333634450034344347534533574367334433320000023210000000132333401000000022335376354634534383436374453406453323353255344346464565593467434844663343334131112211212110000000000000000000000 #=GC scorecons_70 __________________________________________*___*____________*____*_**_***__**_*_____________________________*___*_________*____*_*__***__*______*____________*__*_________*________*___*_*__________*_________*_____________*_______*__**______________________________________________**___*______*___*_*______*_________________*____*__*__**___*_______________________________________________ #=GC scorecons_80 ______________________________________________*___________________*__**___*__*_____________________________*_____________*____*_*___**___________________________________*________*___*_*__________*_______________________*_______*___*__________________________________________________________*_____*________________________________*___*___*_______________________________________________ #=GC scorecons_90 _____________________________________________________________________**___*________________________________*_____________*______*___*____________________________________*________*________________*_____________________________________________________________________________________________________________________________________*_______*_______________________________________________ //