# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000075
#=GF DE Retinoic acid receptor
#=GF AC 1.10.565.10/FF/000075
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 32.190
#=GS Q8MX80/173-412      AC Q8MX80
#=GS Q8MX80/173-412      OS Branchiostoma floridae
#=GS Q8MX80/173-412      DE Retinoic acid receptor
#=GS Q8MX80/173-412      DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS F6VND6/393-636      AC F6VND6
#=GS F6VND6/393-636      OS Ciona intestinalis
#=GS F6VND6/393-636      DE Uncharacterized protein
#=GS F6VND6/393-636      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS F6UGG8/218-461      AC F6UGG8
#=GS F6UGG8/218-461      OS Ciona intestinalis
#=GS F6UGG8/218-461      DE Uncharacterized protein
#=GS F6UGG8/218-461      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS Q4H2W2/393-636      AC Q4H2W2
#=GS Q4H2W2/393-636      OS Ciona intestinalis
#=GS Q4H2W2/393-636      DE Nuclear receptor
#=GS Q4H2W2/393-636      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A1W5BE64/404-647  AC A0A1W5BE64
#=GS A0A1W5BE64/404-647  OS Ciona intestinalis
#=GS A0A1W5BE64/404-647  DE nuclear receptor isoform X1
#=GS A0A1W5BE64/404-647  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 5
Q8MX80/173-412              -WTPEIQTIITTVREAHMATLPDMGKLPKYKVKN---AAEQRGPTDIELWQHFSDLCTETIIKIVQFAKKVPGFTTFGTADQITLLKAACLDILILRLATRLDKESDTVTFINGMMLSRTQMHNAGFGPLTDGVFTFAEGMQKLLFDETEIGLMCSICLVCGDRQGLEDIQRAENLQEPLLEALKAYSRRRIPDDPQRFPKMIMKITDLRSISSKGAERVITLKMEL-SSPMPPLIAEIWEKQNE
F6VND6/393-636              SCSPEIEALVTSVHKFHVETFPLSSELKKYQIPSPPIVKDTSAKTDSNLWEKFAELSTKCIVKIVEFAKGIPGFQDFTIADQITLLKCACLEVLFLRICSRFSPEHDTMTFSDGLTLTRKQMRVCGFGPITEQVFSFAQSLHPLNADATEIGLLSAICLVSADRVDLEEPDKVELLQESLVEGLKYYARKRRPHTPQVFPKLIIKISDLRSISLKGADRVVTVKTEIPCGAMPPLMSEMLENDE-
F6UGG8/218-461              SCSPEIEALVTSVHKFHVETFPLSSELKKYQIPSPPIVKDTSAKTDSNLWEKFAELSTKCIVKIVEFAKGIPGFQDFTIADQITLLKCACLEVLFLRICSRFSPEHDTMTFSDGLTLTRKQMRVCGFGPITEQVFSFAQSLHPLNADATEIGLLSAICLVSADRVDLEEPDKVELLQESLVEGLKYYARKRRPHTPQVFPKLIIKISDLRSISLKGADRVVTVKTEIPCGAMPPLMSEMLENDE-
Q4H2W2/393-636              SCSPEIEALVTSVHKFHVETFPLSSELKKYQIPSPPIVKDTSAKTDSNLWEKFAELSTKCIVKIVEFAKGIPGFQDFTIADQITLLKCACLEVLFLRICSRFSPEHDTMTFSDGLTLTRKQMRVCGFGPITEQVFSFAQSLHPLNADATEIGLLSAICLVSADRVDLEEPDKVELLQESLVEGLKYYARKRRPHTPQVFPKLIIKISDLRSISLKGADRVVTVKTEIPCGAMPPLMSEMLENDE-
A0A1W5BE64/404-647          SCSPEIEALVTSVHKFHVETFPLSSELKKYQIPSPPIVKDTSAKTDSNLWEKFAELSTKCIVKIVEFAKGIPGFQDFTIADQITLLKCACLEVLFLRICSRFSPEHDTMTFSDGLTLTRKQMRVCGFGPITEQVFSFAQSLHPLNADATEIGLLSAICLVSADRVDLEEPDKVELLQESLVEGLKYYARKRRPHTPQVFPKLIIKISDLRSISLKGADRVVTVKTEIPCGAMPPLMSEMLENDE-
#=GC scorecons              25599955569595539549592455939956352225464453994599559569595496999599946999449459999999949996694995459543949959945954959499534999959649959955553933949999955599995599359963465939995959599395969394499399959599599999939996996959495255599995595395450
#=GC scorecons_70           ___***___**_*___*__*_*____*_**_*_______*____**__**__*_**_*__*****_***_****__*__********_******_**___*___*_**_**__*__*_*_**___****_**_**_**_____*__*_*****___****__**__***__*_*_***_*_*_**_*_***_*__**_***_*_**_******_********_*_*_____****__*__*____
#=GC scorecons_80           ___***____*_*___*__*_*____*_**______________**__**__*__*_*__*_***_***__***__*__********_***__*_**___*___*_**_**__*__*_*_**___****_*__**_**_____*__*_*****___****__**__**_____*_***_*_*_**_*_*_*_*__**_***_*_**_******_***_**_*_*_*_____****__*__*____
#=GC scorecons_90           ___***____*_*___*__*_*____*_**______________**__**__*__*_*__*_***_***__***__*__********_***__*_**___*___*_**_**__*__*_*_**___****_*__**_**_____*__*_*****___****__**__**_____*_***_*_*_**_*_*_*_*__**_***_*_**_******_***_**_*_*_*_____****__*__*____
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