# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000069
#=GF DE Protein CBR-NHR-85
#=GF AC 1.10.565.10/FF/000069
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.619
#=GS Q9XUK7/196-419      AC Q9XUK7
#=GS Q9XUK7/196-419      OS Caenorhabditis elegans
#=GS Q9XUK7/196-419      DE Nuclear hormone receptor family member nhr-85
#=GS Q9XUK7/196-419      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS E9HQ36/344-552      AC E9HQ36
#=GS E9HQ36/344-552      OS Daphnia pulex
#=GS E9HQ36/344-552      DE Uncharacterized protein
#=GS E9HQ36/344-552      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS H3FCL5/144-318      AC H3FCL5
#=GS H3FCL5/144-318      OS Pristionchus pacificus
#=GS H3FCL5/144-318      DE PNHR-2
#=GS H3FCL5/144-318      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5VR68/216-431  AC A0A2G5VR68
#=GS A0A2G5VR68/216-431  OS Caenorhabditis nigoni
#=GS A0A2G5VR68/216-431  DE Uncharacterized protein
#=GS A0A2G5VR68/216-431  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8X5D8/197-412      AC A8X5D8
#=GS A8X5D8/197-412      OS Caenorhabditis briggsae
#=GS A8X5D8/197-412      DE Protein CBR-NHR-85
#=GS A8X5D8/197-412      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5VR71/196-411  AC A0A2G5VR71
#=GS A0A2G5VR71/196-411  OS Caenorhabditis nigoni
#=GS A0A2G5VR71/196-411  DE Uncharacterized protein
#=GS A0A2G5VR71/196-411  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 6
Q9XUK7/196-419              ---RMFEEMQKTNVQSQRDQIAIQYENLTEVMHKINQAFGTLQATLEKCTGPIYTDRCPITSN---------FIVIPLKAAIDFANSIPAFLSITQTQRVHLLQNSVFDVMLLASASAST---SQHFPPGGLTYDQ--SSANPI----IPQAIQSISARIRQL--PPQTVPILTAIAVCQADLLPESQ----QPML--LAERLWCV----LGKLGGIQSLATAP--SLLADVRTLRQWHSDRLRQMSQISQHFSQNLLI
E9HQ36/344-552              --------------------VAAQSASFTSV----SEIFASRYAAV-SSLGP--DQLWPPCGDLSHH---------GYQAIQHFAHSLPFIAFLPPDLRAYLLETNALDVMILRLTFRFCLDRESFLFPTGAEVTKACLSSTLLG-STVANRLANLGRLVFRLGIGSDEMAFLSALALLSSDAMNDGSLHGYAPMLNDIANKVLQAFQYFVGQRWSTRPFFIGKLVALLSDIRALQ--HSVAL-----------QTWLA
H3FCL5/144-318              -------------------SVMMGDVSLSEE----SSDFVSRIVALYQQSEPRGERLHPSSSSLSPRLQLAEFTILEAQSVHNFVSALPGFERLPSEDRALIQKQSKRDLLTLRSAVHYDSSEDVVVMGKGETNEWRVTESTLLSLDPMASSVFSFARSLSSLHLDSVEIALLSAIVSFSD--RPGIS----RPHI-----------------------------------VDELQEVH--------------------
A0A2G5VR68/216-431          EKARMFEEMQKTNVQSQKDQIAIQYENLSEVMHKMNQAFITLQTTLEKCTGPIYSDRCPITSN---------FIVIPLKAAIDFANQIPAFLSISQADRVHLLQNSVFDVMLLASATSITSPGSPQFPPGGLSYDQQSSTSNSL----IPQIIQSISDRIRQL--PPQAIPILTAIAVCQADIMPDCQ----QPSL--LSNQLWAV----LGKVGGVNPLLIGP--SLFKDIRSLRQWHNARL----------------
A8X5D8/197-412              EKARMFEEMQKTNVQSQKDQIAIQYENLSEVMHKMNQAFITLQTTLEKCTGPIYSDRCPITSN---------FIVIPLKAAIDFANQIPAFLSISQADRVHLLQNSVFDVMLLASATSITSPGSPQFPPGGLSYDQQSSTSNSL----IPQIIQSISDRIRQL--PPQAIPILTAIAVCQADIMPDCQ----QPSL--LSNQLWAV----LGKVGGVNPLLIGP--SLFKDIRSLRQWHNARL----------------
A0A2G5VR71/196-411          EKARMFEEMQKTNVQSQKDQIAIQYENLSEVMHKMNQAFITLQTTLEKCTGPIYSDRCPITSN---------FIVIPLKAAIDFANQIPAFLSISQADRVHLLQNSVFDVMLLASATSITSPGSPQFPPGGLSYDQQSSTSNSL----IPQIIQSISDRIRQL--PPQAIPILTAIAVCQADIMPDCQ----QPSL--LSNQLWAV----LGKVGGVNPLLIGP--SLFKDIRSLRQWHNARL----------------
#=GC scorecons              0002222222222222212265453356565222154393543466243469223444934641100000004333336643496436936336443395465546339674945633333224324354934343224475470000554353644435349003534654959664444424653400004936003232321300003431232233233200343246539632922240000000000000000
#=GC scorecons_70           ____________________*______*__________*______*____**______*__*_________________*___**___*_*_______*__*___*__***_*__*______________*_________*__*__________*_______*_________*_***________________*_*___________________________________*__*___*____________________
#=GC scorecons_80           ______________________________________*____________*______*________________________*____*_________*_________*___*_________________*_________*__*__________________*_________*_*__________________*________________________________________*___*____________________
#=GC scorecons_90           ______________________________________*____________*______*________________________*____*_________*_________*___*_________________*_______________________________*_________*_*__________________*________________________________________*___*____________________
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