# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000068
#=GF DE Nuclear hormone receptor family member nhr-86
#=GF AC 1.10.565.10/FF/000068
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 90.121
#=GS G5ED47/142-394      AC G5ED47
#=GS G5ED47/142-394      OS Caenorhabditis elegans
#=GS G5ED47/142-394      DE High zinc activated nuclear receptor protein
#=GS G5ED47/142-394      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5ED47/142-394      DR GO; GO:0001158; GO:0003700; GO:0005634; GO:0005737; GO:0008270; GO:0010628; GO:0040008; GO:0071294; 
#=GS Q09587/294-576      AC Q09587
#=GS Q09587/294-576      OS Caenorhabditis elegans
#=GS Q09587/294-576      DE Nuclear hormone receptor family member nhr-22
#=GS Q09587/294-576      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q09587/294-576      DR GO; GO:0005515; GO:0005634; GO:0005829; 
#=GS O16425/152-374      AC O16425
#=GS O16425/152-374      OS Caenorhabditis elegans
#=GS O16425/152-374      DE Nuclear hormone receptor family member nhr-57
#=GS O16425/152-374      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O16425/152-374      DR GO; GO:0001666; GO:0045087; 
#=GS Q965W2/157-405      AC Q965W2
#=GS Q965W2/157-405      OS Caenorhabditis elegans
#=GS Q965W2/157-405      DE Nuclear hormone receptor family member nhr-86
#=GS Q965W2/157-405      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q965W2/157-405      DR GO; GO:0005634; 
#=GS A0A0K3AVA9/157-402  AC A0A0K3AVA9
#=GS A0A0K3AVA9/157-402  OS Caenorhabditis elegans
#=GS A0A0K3AVA9/157-402  DE Nuclear hormone receptor family member nhr-86
#=GS A0A0K3AVA9/157-402  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A8XI79/45-297       AC A8XI79
#=GS A8XI79/45-297       OS Caenorhabditis briggsae
#=GS A8XI79/45-297       DE Protein CBR-NHR-92
#=GS A8XI79/45-297       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 6
G5ED47/142-394              M----------------------------FLNIRRSTNTLVQ-SSVITPTFKMPK--IELHASRFDSAKQVCKAEAHLVTDIVNSYFSPFNSLKFEDKVALFKNFFCYFSHTDRAYQSFKQFESDNLNDKILMPDGGFIKRTEL---------GRFYENAEGVH-TSAEDAAK---IFQPALNYILDVIVDYMRRIHIIETEYLALLGFCLWDDAVPGLSKEAKSLAVQTQSKLLAELQNFYSSQNKDAVEITQRVGVLLLLVPKLTKCVIMLRENSVLAELFNYYEADVCCKNF--KE
Q09587/294-576              IQHVQFYPVVEVENKIFELVDHYVRTEASLNDRRKIMYTDTQIRDVFDTTCECPYENHQLKPFNYKSFCGFVKHDFVMILDYVN-QFPEFQALHKNDKNVVYRMACAVDSMLASAYYSYKV---GIEKERLILFNGDYINMNPIPISGDEPGAGTEFQTPQEHEKYKTLMPLK----LKQYFD-----LAIPFARLEVSFEEYVLLKALIIWQISNYRLLEEGRAICARQRDTIVQALH--KVVEERGDEDPAIRVGQLLLSMSYITEQVQAMTNSYLVMTFFDVVSCDSIMYDLL-SF
O16425/152-374              ----------------------------------------------------TPR------ATNYGEFCKIYSNDVYLQFEFLEGSFPQFKEMGGFEKKHVFKYFFVSFLILEMGYRSYQ-----EGTDAIVLANGDFIDTMNL---------DEFYYDPESLEKCKPTDAMK---MYRPNFDQMKRNVFQPLSHQKLSLIEFLALVSLCTWNESLDGQPDCYYPSCRPVRQSVIADLKAFYEKDSPD-VDPAYRLSGLLMLLPALERSVELFLQTMEVKRLFRCFPFHDKIYKIIDGQ
Q965W2/157-405              ---------------------------RKMDNARLVIHRKDG-QSLFKE--KTPK------AVNYKEACAQSIREVSLVADWVAWCFDDFVTLPMDQKKVLFRNFYTPFSVLEGAFLCHI----NDTSNALILPSGDYIDTNNL---------KSFFNIPDEEQPMTDDEIEKFCRMFKPSFELNRRGLVLPMMAEKIDVFEFFALCTFVFWDFGLDEQTDDCMMIGKSVKDRVMKELA-FYLRCAKRLEEPSLRVASLLTLLPALQRCVRRFQEDIEITNVFNVYAPPKDFYDLVNGK
A0A0K3AVA9/157-402          ---------------------------RKMDNARLVIHRKDG-QSLFKE--KTPK------AVNYKEACAQSIREVSLVADWVAWCFDDFVTLPMDQKKVLFRNFYTPFSVLEGAFLCHI----NDTSNALILPSGDYIDTNNL---------KSFFNIPDEEQPMTDDEIEK---MFKPSFELNRRGLVLPMMAEKIDVFEFFALCTFVFWDFGLDEQTDDCMMIGKSVKDRVMKELA-FYLRCAKRLEEPSLRVASLLTLLPALQRCVRRFQEDIEITNVFNVYAPPKDFYDLVNGK
A8XI79/45-297               I--------------LYELLKNY----NYLESIRQVIHRDES-KSVFIK--KVAR------PLNYKESISVFLKEYNLVEDWILNSFSIFSTFPKDQKTVLLQNFYLQFVLLEGGHFACE----NNRSDITYLPSGDYIDCSNP---------ESYYHDPDGLQPISAEDASK---MFSSSFDTYRRNVTHPMQKDHLDRFEFLALSALTLFDTGLEGQSDSSIEICRTMRTSIQRELL-DYCMLKRSELDSSIRLGNMLSILPNLQRAARRFHEDMTLSNVMNAYSVDQKFYEL--GK
#=GC scorecons              10000000000000000000000000011323252333322202344110043740000005367553433323632752736313942924632359346654553254365366255300003324535474497795344500000000043473375425224334429000464537511232532652424532297569246336524434435332254333533533592035222353136543965279356637453733535433534575353242236451053
#=GC scorecons_70           _____________________________________________________*_________**_________*__*__*_*___*__*_______*___*_________*___*________________*__****_________________*__*____________*________*___________________**_**_____*_________________________*____________*___**__**___*_*___*____________*________________
#=GC scorecons_80           _____________________________________________________*__________*____________*__*_____*__*_______*__________________________________*__*_**_________________*_______________*________*___________________**__*_______________________________*________________*___**_________*_____________________________
#=GC scorecons_90           ______________________________________________________________________________________*__*_______*_____________________________________*__*_________________________________*____________________________*___*_______________________________*________________*____*_______________________________________
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