# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000066
#=GF DE Nuclear Hormone Receptor family
#=GF AC 1.10.565.10/FF/000066
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 18.163
#=GS G5EEM0/193-415      AC G5EEM0
#=GS G5EEM0/193-415      OS Caenorhabditis elegans
#=GS G5EEM0/193-415      DE Nuclear Hormone Receptor family
#=GS G5EEM0/193-415      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EEM0/193-415      DR GO; GO:0005515; GO:0005634; 
#=GS E3LHV5/200-422      AC E3LHV5
#=GS E3LHV5/200-422      OS Caenorhabditis remanei
#=GS E3LHV5/200-422      DE CRE-NHR-114 protein
#=GS E3LHV5/200-422      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A2G5TAJ4/213-438  AC A0A2G5TAJ4
#=GS A0A2G5TAJ4/213-438  OS Caenorhabditis nigoni
#=GS A0A2G5TAJ4/213-438  DE Uncharacterized protein
#=GS A0A2G5TAJ4/213-438  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261CJQ6/205-430  AC A0A261CJQ6
#=GS A0A261CJQ6/205-430  OS Caenorhabditis latens
#=GS A0A261CJQ6/205-430  DE Uncharacterized protein
#=GS A0A261CJQ6/205-430  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A8WQF2/197-429      AC A8WQF2
#=GS A8WQF2/197-429      OS Caenorhabditis briggsae
#=GS A8WQF2/197-429      DE Protein CBR-NHR-114
#=GS A8WQF2/197-429      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TA16/215-440  AC A0A2G5TA16
#=GS A0A2G5TA16/215-440  OS Caenorhabditis nigoni
#=GS A0A2G5TA16/215-440  DE Uncharacterized protein
#=GS A0A2G5TA16/215-440  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 6
G5EEM0/193-415              ---------WGQPSERHQIFDLRFVNHDDYHYWHERDWFLLTEYAKTFDVFEALDYQDKAELVRHAAITVPVLVQVWNSPDYGPDTIVFPDGAYFDRTPEPTRPAGLNRKKYQMLDLVLKPFRDLQLDATEFAAFKAVTFLNPDADISLPARKLVNNERVRITKQLYGYMAMKDDVDTAIERFARLVLMGTSMSKMACESKEAVWIADFFENIGFSAFARQLFFGDTTSV--VA-
E3LHV5/200-422              -----------HPSERHQIFDLRFVTQQDYHYWHERDWFLLTEYAKTFDVFEALDYQDKAELVRHAAITVPVLVQVWNSPDYGPDTIVFPDGSYFDKTPEPTRPAGLNRKKFQMLDLVLKPFRDLQLDAVEFAAFKAVTFLNPDADITLPARKLINNERVRITKQLYAYMATKDDMDTAIERFARLVLMGTSMSKMACESKEAVWIADFFENIGFSSFARQLFFGDEMEERIVH-
A0A2G5TAJ4/213-438          ------MAQWGQPSERHQMYDMRFVTQQDYHYWHERDWFVLTEYAKTFDVFEALDYQDKAELVRHAAITVPVLVQVWNSPDYGPDTIVFPDGTYFDKTPEPTRPAGLNRKKYQMLDLVLKPFRDLQLDATEFAAFKAVTFLNPDADITLPARKLINNERVRITKQLYAYMATKDDVDTAIERFARLVLMGTSMSKMACESKEAVWIADFFENIGFSTFARQLFFGDDVTN--AS-
A0A261CJQ6/205-430          --------QWGHPSEKHQIFDLRFVTQQDYHYWHERDWFLLTEYAKTFDVFEALDYQDKAELVRHAAITVPVLVQVWNSPDYGPDTIVFPDGSYFDKTPEPTRPAGLNRKKFQMLDLVLKPFRDLQLDAVEFAAFKAVTFLNPDADITLPARKLINNERVRITKQLYAYMATKDDMDTAIERFARLVLMGTSMSKMACESKEAVWIADFFENIGFSSFARQLFFGDEMEERIVH-
A8WQF2/197-429              LSDPTFMAQWGQPSERHQMYEMRFVTQQDYHYWHERDWFVLTEYAKTFDVFEALDYQDKAELVRHAAITVPVLVQVWNSPDYGPDTIVFPDGTYFDKTPEPTRPAGLNRKKYQMLDLVLKPFRDLQLDATEFAAFKAVTFLNPDAEITLPARKLINNERVRITKQLYAYMATKDDVDTAIERFARLVLMGTSMSKMACESKEAVWIADFFENIGFSTFARQLFFGDDVTT--TSA
A0A2G5TA16/215-440          ------MAQWGQPSERHQMYDMRFVTQQDYHYWHERDWFVLTEYAKTFDVFEALDYQDKAELVRHAAITVPVLVQVWNSPDYGPDTIVFPDGTYFDKTPEPTRPAGLNRKKYQMLDLVLKPFRDLQLDATEFAAFKAVTFLNPDADITLPARKLINNERVRITKQLYAYMATKDDVDTAIERFARLVLMGTSMSKMACESKEAVWIADFFENIGFSTFARQLFFGDDVTN--AS-
#=GC scorecons              0000001135569997996776999676999999999996999999999999999999999999999999999999999999999999999959997999999999999997999999999999999995999999999999999796999999799999999999969996999699999999999999999999999999999999999999995999999999544300440
#=GC scorecons_70           ___________****************************_****************************************************_************************************_**************************************************************************************_*********_________
#=GC scorecons_80           ____________******_**_***_*_***********_****************************************************_************************************_*****************_*******************_***_***_****************************************_*********_________
#=GC scorecons_90           ____________***_**____***___***********_****************************************************_***_**************_*****************_***************_*_******_************_***_***_****************************************_*********_________
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