# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000062
#=GF DE Nuclear Hormone Receptor family
#=GF AC 1.10.565.10/FF/000062
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 21.641
#=GS Q17589/141-391      AC Q17589
#=GS Q17589/141-391      OS Caenorhabditis elegans
#=GS Q17589/141-391      DE Nuclear Hormone Receptor family
#=GS Q17589/141-391      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q17589/141-391      DR GO; GO:0005515; 
#=GS A0A261CHX0/96-351   AC A0A261CHX0
#=GS A0A261CHX0/96-351   OS Caenorhabditis latens
#=GS A0A261CHX0/96-351   DE Uncharacterized protein
#=GS A0A261CHX0/96-351   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5SXD6/142-398  AC A0A2G5SXD6
#=GS A0A2G5SXD6/142-398  OS Caenorhabditis nigoni
#=GS A0A2G5SXD6/142-398  DE Uncharacterized protein
#=GS A0A2G5SXD6/142-398  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8WMA2/134-393      AC A8WMA2
#=GS A8WMA2/134-393      OS Caenorhabditis briggsae
#=GS A8WMA2/134-393      DE Protein CBR-NHR-17
#=GS A8WMA2/134-393      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2H2I3B7/139-393  AC A0A2H2I3B7
#=GS A0A2H2I3B7/139-393  OS Caenorhabditis japonica
#=GS A0A2H2I3B7/139-393  DE Uncharacterized protein
#=GS A0A2H2I3B7/139-393  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS E3MVP1/136-390      AC E3MVP1
#=GS E3MVP1/136-390      OS Caenorhabditis remanei
#=GS E3MVP1/136-390      DE CRE-NHR-17 protein
#=GS E3MVP1/136-390      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A2G5SX04/150-406  AC A0A2G5SX04
#=GS A0A2G5SX04/150-406  OS Caenorhabditis nigoni
#=GS A0A2G5SX04/150-406  DE Uncharacterized protein
#=GS A0A2G5SX04/150-406  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 7
Q17589/141-391              -------KLLLSSAMMIHTSLREALDMTQIAFNDENHT---------YDERMDPKYPTNFSYWRAKILTVLVEWAKSFE----VFSHLIPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQSVSTDGVSNKTFGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGSQLIAAKRKRLLDSLQKWLHQQTKDSIEASTRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYP--
A0A261CHX0/96-351           --EALYQKLLHSSAMTIHTSLREALDMTQIAFNDKNSK---------YESRMDPKYPTNFSFWRAKILTVLVEWAKSFE----VFAHLMPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQSVSSDGVSNKTYGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGAQIIAAKRKRLLDSLQRWLQAQTKDAIEASTRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYP--
A0A2G5SXD6/142-398          --------LLHSSAMTIHTSLREALDMSQIAFNDTNNKILLQYCLLQYDDRMDPKYPTNFSYWRAKILTVLVEWAKSFE----VFSHLQPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQTVSSDGVSTKTYGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGSQLIAAKRRRLLHALQDWLQQQNKH--EAAGRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYP--
A8WMA2/134-393              HKEKLYQKLLHSSAMTIHTSLREALDMSQIAFNDTNNK---------YDDRMDPKYPTNFSYWRAKILTVLVEWAKSFEASISVFSHLQPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQTVSSDGVSTKTYGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGSQLIAAKRRRLLHALQDWLQQQNKH--EAAGRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYP--
A0A2H2I3B7/139-393          -----YQKLLHSSAMTIHNSLREALDMSQIAFNDKTNR---------YESRMDPKYPTNFSYWRAKILTVLVEWAKSFE----VFSHLLPEDQKRLFIHTAFSNLVLAEAFHTPEKYTDRIVFPDGLCGFRNVAQSVSSDGVSNKTFGLTPTVVAVINDVLVPVRRMRLTKVEYVLLQAIIFFDPDCLSLTNHGSQLIAAKRKRLLNSLQKWLYESIKDNIEASTRFAEIMLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYPDH
E3MVP1/136-390              ---ALYQKLLHSSAMTIHTSLREALDMTQIAFNDKNSK---------YESRMDPKYPTNFSFWRAKILTVLVEWAKSFE----VFAHLMPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQSVSSDGVSNKTYGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGAQIIAAKRKRLLDSLQRWLQAQTKDAIEASTRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYP--
A0A2G5SX04/150-406          --------LLHSSAMTIHTSLREALDMSQIAFNDTNNKILLQYCLLQYDDRMDPKYPTNFSYWRAKILTVLVEWAKSFE----VFSHLQPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQTVSSDGVSTKTYGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGSQLIAAKRRRLLHALQDWLQQQNKH--EAAGRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSYP--
#=GC scorecons              000012249969999799799999999599999947560000000009659999999999979999999999999999900009969939999999999999999999999999999799999999999999999599799995997999999999999999979999999999999999999999999997996969999969994599499656495129955999997999999999999999999999999999999999999999900
#=GC scorecons_70           ________*******************_******_*___________**_*****************************____*****_**********************************************_*******_**************************************************************__**_**__*_*___**__**********************************************__
#=GC scorecons_80           ________**_****************_******_*___________*__*****************************____**_**_**********************************************_*******_**************************************************_*_*****_***__**_**____*___**__**********************************************__
#=GC scorecons_90           ________**_****_**_********_******_____________*__***********_*****************____**_**_****************************_*****************_**_****_**_****************_***************************_**_*_*****_***__**_**____*___**__*****_****************************************__
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