# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/000054
#=GF DE Nuclear Hormone Receptor family
#=GF AC 1.10.565.10/FF/000054
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 88.498
#=GS Q21804/182-406      AC Q21804
#=GS Q21804/182-406      OS Caenorhabditis elegans
#=GS Q21804/182-406      DE Nuclear Hormone Receptor family
#=GS Q21804/182-406      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q21804/182-406      DR GO; GO:0042594; 
#=GS Q21805/161-409      AC Q21805
#=GS Q21805/161-409      OS Caenorhabditis elegans
#=GS Q21805/161-409      DE Nuclear Hormone Receptor family
#=GS Q21805/161-409      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q21805/161-409      DR GO; GO:0042594; 
#=GS Q21803/183-410      AC Q21803
#=GS Q21803/183-410      OS Caenorhabditis elegans
#=GS Q21803/183-410      DE Nuclear Hormone Receptor family
#=GS Q21803/183-410      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q21803/183-410      DR GO; GO:0042594; 
#=GS O01931/206-459      AC O01931
#=GS O01931/206-459      OS Caenorhabditis elegans
#=GS O01931/206-459      DE Nuclear hormone receptor family member nhr-154
#=GS O01931/206-459      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O01931/206-459      DR GO; GO:0042594; 
#=GS A8WQ49/159-360      AC A8WQ49
#=GS A8WQ49/159-360      OS Caenorhabditis briggsae
#=GS A8WQ49/159-360      DE Protein CBG01321
#=GS A8WQ49/159-360      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TAS9/202-406  AC A0A2G5TAS9
#=GS A0A2G5TAS9/202-406  OS Caenorhabditis nigoni
#=GS A0A2G5TAS9/202-406  DE Uncharacterized protein
#=GS A0A2G5TAS9/202-406  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5TAG7/189-393  AC A0A2G5TAG7
#=GS A0A2G5TAG7/189-393  OS Caenorhabditis nigoni
#=GS A0A2G5TAG7/189-393  DE Uncharacterized protein
#=GS A0A2G5TAG7/189-393  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5TB20/192-396  AC A0A2G5TB20
#=GS A0A2G5TB20/192-396  OS Caenorhabditis nigoni
#=GS A0A2G5TB20/192-396  DE Uncharacterized protein
#=GS A0A2G5TB20/192-396  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5TGD4/233-453  AC A0A2G5TGD4
#=GS A0A2G5TGD4/233-453  OS Caenorhabditis nigoni
#=GS A0A2G5TGD4/233-453  DE Uncharacterized protein
#=GS A0A2G5TGD4/233-453  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8Y421/236-467      AC A8Y421
#=GS A8Y421/236-467      OS Caenorhabditis briggsae
#=GS A8Y421/236-467      DE Protein CBR-NHR-154
#=GS A8Y421/236-467      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TGP1/261-481  AC A0A2G5TGP1
#=GS A0A2G5TGP1/261-481  OS Caenorhabditis nigoni
#=GS A0A2G5TGP1/261-481  DE Uncharacterized protein
#=GS A0A2G5TGP1/261-481  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 11
Q21804/182-406              -------------------------ILAEKPTFAVEQIPNLSFIP----------DQVFHEYGGLAHNSFLAVVEFAKFLDFFPKLDSETQLKVVRHGALMVRGMMNTERSIRKFHSDCVRRADGSIAGKPMR--NYNGIWVEQRKIVQKGLHAFLRNKIDETEYLLLKGIVLCNPAICGLPESAQQILEDERRRYVRSLLTYCLKQYGIRYGPDRLSSILSIMPIMENQQKEEKSFNVILRSFYSNVSILVSPLYDEIMSS---
Q21805/161-409              IENKIDDLFNSKWPSNYCDWRTVTEILKAHPILEMSKIPNLSFQP----------NQLFPDHAGFAHNASLAALEFTKMLDIFPKLSIDTVQKLVRHGLFMCGSMMTSRRSIQKFNSDTLRRTDGTISGKPAK--SWNGVWVDHRKIVQRVLRAFLRIKLNDVEYLFLKVITILNPAVSDLFAQDQKIIERERNRFAQCLLTYCLREYAENNGPSRFASVLSIISSMELQQKEEKSFNILLRASFPDAIVLVSPLFDEIMS----
Q21803/183-410              ----------------------LSEIIQMKPYLKVSKIPNLKLIR----------NQMNAELAGYAHNGSLAMVEYAKMLDFFPKISKETAIKLVKHGLFMCGSLSFSRRSIQKYNSDILRFTDGSVAGKPKT--NWNGVMLDHRRIAQKTLHSILRVKLDYVEYLFLKAITMCNPAVSDFPAEDQKIIDKHRFNYAQSLLNYCLKQHGQIHGADRFASILSIMSIMEVQQKEEKSCFFVFRSIYSEFDVFVSPLFDEISNY---
O01931/206-459              --SKVEPLHRSGMPPGYRDIRKLEEILDSKPVLVVTDIPNLKFCPSPCANEKRP----RRHFTNYVHTSYLASLESSKMFEFSSQLDLESRILLMKHATLICSNMMNAFFSINEMKSDILRHPDGSMSGHMRKFDRENDVMTDHVKLIQKTLITFLNHKVDKIEYLLFKAIMLCNPAVPGLDSWNQEIIEKERNQYVKALLNYCLLQHGKLQGPTRFATILAMAPIIENQSKNQKDFHVYIKAKHFQKHKKMGTTFRKCI-----
A8WQ49/159-360              ---------------------------------------------------KCN----HRRCNNAVHSSFLASIESSKMFDFFPKLNLDSKEHLLKHVTAVCSTMTSAYFSISDLKFDVLVQPNGTYDRITLNEDAEKSAVIAYTNAQQKTLACFLRNIIDRIEYLHFKAIMLCNPAVSNLTLFDQHILGVERNKYLKSMYNYCRLQCGKVQGPNRFAEILAMAPIIENQAKKQKDFHVYVKTRHLLQHEELGHAEQ--------
A0A2G5TAS9/202-406          ---------------------------------------------------KCN----HRRCNNAVHSSFLASIESSKMFDFFTKLNLDSKELLLKHVTAVCSTMTSAYFSISDLKFDILVQPNGTYDRIVLNEDAEKSAVIAYTNAQQKTLACFLRNKIDRIEYLHFKAIMLCNPAVSNLTLFDQHVLGLERNKYLKSMYNYCQLQYGKVQGPNRFAEILAMAPIIENQAKEQKDFHVYVKTRHMLQHEELGHAEQAVV-----
A0A2G5TAG7/189-393          ---------------------------------------------------KCN----HRRCNNAVHSSFLASIESSKMFDFFTKLNLDSKELLLKHVTAVCSTMTSAYFSISDLKFDILVQPNGTYDRIVLNEDAEKSAVIAYTNAQQKTLACFLRNKIDRIEYLHFKAIMLCNPAVSNLTLFDQHVLGLERNKYLKSMYNYCQLQYGKVQGPNRFAEILAMAPIIENQAKEQKDFHVYVKTRHMLQHEELGHAEQAVV-----
A0A2G5TB20/192-396          ---------------------------------------------------KCN----HRRCNNAVHSSFLASIESSKMFDFFTKLNLDSKELLLKHVTAVCSTMTSAYFSISDLKFDILVQPNGTYDRIVLNEDAEKSAVIAYTNAQQKTLACFLRNKIDRIEYLHFKAIMLCNPAVSNLTLFDQHVLGLERNKYLKSMYNYCQLQYGKVQGPNRFAEILAMAPIIENQAKEQKDFHVYVKTRHMLQHEELGHAEQAVV-----
A0A2G5TGD4/233-453          ---------------------------------VISEIPNLKFCPMPCPKETKEKPHLRRRCTNYVHSSFLASIESSKMFDFSSQINLESRMLLMKHATVVCSNMMNAFFSMNEMKSDVLLHPDGSISGPMHKKDRETNTISDHVRTLQKTLISFLNNKIDKIEYLLFKAIMLCNPAVPGLSVIDQQIIEKERNQYVKSLLNYCLLQHGKLHGPARFGAILALAPTIENQSKLQKDFHVYLKARHFQKHKGMGH-----------
A8Y421/236-467              ---------------------------------IISEIPNLKFCPMPCPKETKEKPHLRRRCTNYVHSSFLASIESSKMFDFSSQINLESRMLLMKHATVVCSNMMNAFFSMNEMKSDVLLHPDGSISGPMHKKDRETNTISDHVRTLQKTLISFLNNKIDKIEYLLFKAIMLCNPAVPGLSVIDQQIIEKERNQYVKSLLNYCLLQHGKLHGPARFGAILALAPTIENQSKLQKDFHVYLKARHFQKHKEMGHTGRKCVSSMFD
A0A2G5TGP1/261-481          ---------------------------------VISEIPNLKFCPMPCPKETKEKPHLRRRCTNYVHSSFLASIESSKMFDFSSQINLESRMLLMKHATVVCSNMMNAFFSMNEMKSDVLLHPDGSISGPMHKKDRETNTISDHVRTLQKTLISFLNNKIDKIEYLLFKAIMLCNPAVPGLSVIDQQIIEKERNQYVKSLLNYCLLQHGKLHGPARFGAILALAPTIENQSKLQKDFHVYLKARHFQKHKGMGH-----------
#=GC scorecons              0000000000000000000000000110011011222333323130000002110121455445469565995695597687556655764347579454675485463497454559573466964463435134444434563543986934796576746999469695779998557332695765379658566756995476753597497548965565695949469575645754633343256532322200000
#=GC scorecons_70           __________________________________________________________________*_*_**__*__*****__**__*____*_**____*__*_____**_____*_*___**__________________*____****__**__***_****_****_******__*___**_**__**__*_***_***__***___**_**__**___*_**_*_*_**_*_*__*__*____________________
#=GC scorecons_80           __________________________________________________________________*___**__*__**_**___________*_**____*__*_____**_____*_*____*_______________________**_*__**__*_*__***__*_*___****__*____*_*___**__*______**__*_*___**_**__**______*_*_*__*_*____________________________
#=GC scorecons_90           __________________________________________________________________*___**__*__*__*_______________*_____________*______*______*_______________________**_*___*_______***__*_*___****_______*______*__*______**________*__*___**______*_*_*__*______________________________
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