# STOCKHOLM 1.0
#=GF ID 1.10.357.140/FF/000019
#=GF DE Protoheme IX farnesyltransferase
#=GF AC 1.10.357.140/FF/000019
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 20.161
#=GS A9A606/16-183      AC A9A606
#=GS A9A606/16-183      OS Nitrosopumilus maritimus SCM1
#=GS A9A606/16-183      DE Protoheme IX farnesyltransferase
#=GS A9A606/16-183      DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus maritimus; 
#=GS A0A087RMV9/16-183  AC A0A087RMV9
#=GS A0A087RMV9/16-183  OS Marine Group I thaumarchaeote SCGC AAA799-D11
#=GS A0A087RMV9/16-183  DE Protoheme IX farnesyltransferase
#=GS A0A087RMV9/16-183  DR ORG; Archaea; Thaumarchaeota; Marine Group I thaumarchaeote SCGC AAA799-D11; 
#=GS A0A087RYF7/16-183  AC A0A087RYF7
#=GS A0A087RYF7/16-183  OS Marine Group I thaumarchaeote SCGC AAA799-P11
#=GS A0A087RYF7/16-183  DE Protoheme IX farnesyltransferase
#=GS A0A087RYF7/16-183  DR ORG; Archaea; Thaumarchaeota; Marine Group I thaumarchaeote SCGC AAA799-P11; 
#=GS A0A081S5M4/16-183  AC A0A081S5M4
#=GS A0A081S5M4/16-183  OS Marine Group I thaumarchaeote SCGC AAA799-E16
#=GS A0A081S5M4/16-183  DE Protoheme IX farnesyltransferase
#=GS A0A081S5M4/16-183  DR ORG; Archaea; Thaumarchaeota; Marine Group I thaumarchaeote SCGC AAA799-E16; 
#=GS A0A087RVR4/16-183  AC A0A087RVR4
#=GS A0A087RVR4/16-183  OS Marine Group I thaumarchaeote SCGC RSA3
#=GS A0A087RVR4/16-183  DE Protoheme IX farnesyltransferase
#=GS A0A087RVR4/16-183  DR ORG; Archaea; Thaumarchaeota; Marine Group I thaumarchaeote SCGC RSA3; 
#=GS A0A2G4J0K6/16-181  AC A0A2G4J0K6
#=GS A0A2G4J0K6/16-181  OS Thaumarchaeota archaeon
#=GS A0A2G4J0K6/16-181  DE Protoheme IX farnesyltransferase
#=GS A0A2G4J0K6/16-181  DR ORG; Archaea; Thaumarchaeota; Thaumarchaeota archaeon; 
#=GS S2E428/16-180      AC S2E428
#=GS S2E428/16-180      OS Candidatus Nitrosarchaeum limnium BG20
#=GS S2E428/16-180      DE Protoheme IX farnesyltransferase
#=GS S2E428/16-180      DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosarchaeum; Candidatus Nitrosarchaeum limnium; 
#=GS A0A2Z2HI10/20-186  AC A0A2Z2HI10
#=GS A0A2Z2HI10/20-186  OS Candidatus Nitrosomarinus catalina
#=GS A0A2Z2HI10/20-186  DE Protoheme IX farnesyltransferase
#=GS A0A2Z2HI10/20-186  DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosomarinus; Candidatus Nitrosomarinus catalina; 
#=GS A0A3M6JZ64/16-183  AC A0A3M6JZ64
#=GS A0A3M6JZ64/16-183  OS Nitrosopumilus sp.
#=GS A0A3M6JZ64/16-183  DE Protoheme IX farnesyltransferase
#=GS A0A3M6JZ64/16-183  DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus sp.; 
#=GS I3D1J4/17-180      AC I3D1J4
#=GS I3D1J4/17-180      OS Candidatus Nitrosopumilus salaria BD31
#=GS I3D1J4/17-180      DE Protoheme IX farnesyltransferase
#=GS I3D1J4/17-180      DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Candidatus Nitrosopumilus salaria; 
#=GF SQ 10
A9A606/16-183              LTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLALAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLA
A0A087RMV9/16-183          LTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLVLAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLA
A0A087RYF7/16-183          LTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLVLAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLA
A0A081S5M4/16-183          LTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLVLAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLA
A0A087RVR4/16-183          LTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLVLAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLA
A0A2G4J0K6/16-181          LTKPKIWYLLVFTAFGAALTASNIYNIPISIETWALMLFSVASGSAAANTLTNYHDRDIDAIMERTKDRPLPSKRIYPAVKARNFGLVLAGISLVLAFAISSTTTLEQGVWATIFIAFGLVNNIIVYSYILKRNSRTNIILGGLCGGSPPMIGWVAVSMSDLWTMG--
S2E428/16-180              LTKPKIWYLLVFTAFGATLTASNIYNIEISLPTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKNRPLPSKRIHPAEKARNFGLALAGISLVLAFAISFTTTFEQGIWATAFIAFGLVNNILVYSYMLKRNSRTNIILGGLCGGSPPMIGWVAVTTTDLWTM---
A0A2Z2HI10/20-186          LTKPKIWYLLVFTAFGAALTASNIYNIPISIETWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKDRPLPSKRIYPAVKARNFGLALAGISLVLAFAISFTTTLEQGIWATIFIAFALVNNIIVYSYVLKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGL-
A0A3M6JZ64/16-183          LTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLALAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLA
I3D1J4/17-180              -TKPKIWYLLVFTAFGAALTASNIYNIEISPATWILMLFSVAAGSAAANTLTNYHDRDIDAVMERTKGRPLPSKRIYPAVKARNFGLALAGISLVLAFGISFTTTLEQGAWATAFIAFGLVNNIIVYSYVLKRNSRTNIILGGLCGGSPPMIGWVAVSMSDLWTM---
#=GC scorecons             699999999999999997999999959596449979999999799999999999999999989999959999999979969999999699999999995996999799949996999979699969999499999999999999999999999999967799999421
#=GC scorecons_70          *************************_*_*___***********************************_*******************_**********_**********_***_***************_***********************************___
#=GC scorecons_80          _************************_*_*___***********************************_***********_*******_**********_**_*******_***_******_***_****_***************************__******___
#=GC scorecons_90          _****************_*******_*_*___**_*******_******************_*****_********_**_*******_**********_**_***_***_***_****_*_***_****_***************************___*****___
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