# STOCKHOLM 1.0
#=GF ID 1.10.30.10/FF/000082
#=GF DE Mitochondrial transcription factor A, isoform B
#=GF AC 1.10.30.10/FF/000082
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 15.156
#=GS Q86BR8/73-180      AC Q86BR8
#=GS Q86BR8/73-180      OS Drosophila melanogaster
#=GS Q86BR8/73-180      DE Mitochondrial transcription factor A, isoform B
#=GS Q86BR8/73-180      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q86BR8/73-180      DR GO; GO:0003700; GO:0005739; GO:0006979; GO:0045893; 
#=GS Q9VDL2/46-153      AC Q9VDL2
#=GS Q9VDL2/46-153      OS Drosophila melanogaster
#=GS Q9VDL2/46-153      DE LD40493p
#=GS Q9VDL2/46-153      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VDL2/46-153      DR GO; GO:0003700; GO:0005739; GO:0006979; GO:0045893; 
#=GS B4IIB1/45-153      AC B4IIB1
#=GS B4IIB1/45-153      OS Drosophila sechellia
#=GS B4IIB1/45-153      DE GM23183
#=GS B4IIB1/45-153      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4QS21/45-153      AC B4QS21
#=GS B4QS21/45-153      OS Drosophila simulans
#=GS B4QS21/45-153      DE GD20056
#=GS B4QS21/45-153      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A1W4V9Y4/73-182  AC A0A1W4V9Y4
#=GS A0A1W4V9Y4/73-182  OS Drosophila ficusphila
#=GS A0A1W4V9Y4/73-182  DE transcription factor A, mitochondrial isoform X1
#=GS A0A1W4V9Y4/73-182  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4VAE0/52-161  AC A0A1W4VAE0
#=GS A0A1W4VAE0/52-161  OS Drosophila ficusphila
#=GS A0A1W4VAE0/52-161  DE transcription factor A, mitochondrial isoform X2
#=GS A0A1W4VAE0/52-161  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4UY31/45-154  AC A0A1W4UY31
#=GS A0A1W4UY31/45-154  OS Drosophila ficusphila
#=GS A0A1W4UY31/45-154  DE transcription factor A, mitochondrial isoform X3
#=GS A0A1W4UY31/45-154  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0R1E1A7/72-181  AC A0A0R1E1A7
#=GS A0A0R1E1A7/72-181  OS Drosophila yakuba
#=GS A0A0R1E1A7/72-181  DE Uncharacterized protein, isoform B
#=GS A0A0R1E1A7/72-181  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4PPP3/45-154      AC B4PPP3
#=GS B4PPP3/45-154      OS Drosophila yakuba
#=GS B4PPP3/45-154      DE Uncharacterized protein, isoform A
#=GS B4PPP3/45-154      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 9
Q86BR8/73-180              -GLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKEL-
Q9VDL2/46-153              -GLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKEL-
B4IIB1/45-153              VGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQVYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKEL-
B4QS21/45-153              VGLPPRPKKPLTPYFRFMREQRPKLKAANPQISTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKEL-
A0A1W4V9Y4/73-182          VGLPPRPKKPLTPYFRFMREQRPKLMAANPKITTIEAVRQLSKNWSDADAQLKERLQAEFKRDQQIYLEQRTKYDATLTDEQRAEIKQLKQDIVDAKERRQLRKRVKELG
A0A1W4VAE0/52-161          VGLPPRPKKPLTPYFRFMREQRPKLMAANPKITTIEAVRQLSKNWSDADAQLKERLQAEFKRDQQIYLEQRTKYDATLTDEQRAEIKQLKQDIVDAKERRQLRKRVKELG
A0A1W4UY31/45-154          VGLPPRPKKPLTPYFRFMREQRPKLMAANPKITTIEAVRQLSKNWSDADAQLKERLQAEFKRDQQIYLEQRTKYDATLTDEQRAEIKQLKQDIVDAKERRQLRKRVKELG
A0A0R1E1A7/72-181          VGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKSWSDVDAQLKERLQAEFKRDQQIYLEQRTKYDATLTEEQRAEIKQLKQDIVEAKERRQLRKRVKELG
B4PPP3/45-154              VGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKSWSDVDAQLKERLQAEFKRDQQIYLEQRTKYDATLTEEQRAEIKQLKQDIVEAKERRQLRKRVKELG
#=GC scorecons             59999999999999999999999995999969797969999996999699999999999999999896969999999997999999999999697999999999999992
#=GC scorecons_70          _************************_**********_************************************************************************_
#=GC scorecons_80          _************************_****_***_*_******_***_*******************_*_*********_************_****************_
#=GC scorecons_90          _************************_****_*_*_*_******_***_*******************_*_*********_************_*_**************_
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