# STOCKHOLM 1.0
#=GF ID 1.10.287.80/FF/000017
#=GF DE Transcription initiation factor TFIID subunit 3
#=GF AC 1.10.287.80/FF/000017
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 51.384
#=GS A0DZH5/1-69               AC A0DZH5
#=GS A0DZH5/1-69               OS Paramecium tetraurelia
#=GS A0DZH5/1-69               DE Uncharacterized protein
#=GS A0DZH5/1-69               DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS H3AJT2/5-26_251-288       AC H3AJT2
#=GS H3AJT2/5-26_251-288       OS Latimeria chalumnae
#=GS H3AJT2/5-26_251-288       DE Uncharacterized protein
#=GS H3AJT2/5-26_251-288       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Coelacanthiformes; Coelacanthidae; Latimeria; Latimeria chalumnae; 
#=GS W5NF94/5-26_233-270       AC W5NF94
#=GS W5NF94/5-26_233-270       OS Lepisosteus oculatus
#=GS W5NF94/5-26_233-270       DE Uncharacterized protein
#=GS W5NF94/5-26_233-270       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS Q6QI09/5-26_233-270       AC Q6QI09
#=GS Q6QI09/5-26_233-270       OS Rattus norvegicus
#=GS Q6QI09/5-26_233-270       DE LRRGT00199
#=GS Q6QI09/5-26_233-270       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS A0A151NPQ9/25-46_253-289  AC A0A151NPQ9
#=GS A0A151NPQ9/25-46_253-289  OS Alligator mississippiensis
#=GS A0A151NPQ9/25-46_253-289  DE Transcription initiation factor TFIID subunit 3 isoform B
#=GS A0A151NPQ9/25-46_253-289  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator mississippiensis; 
#=GS A0A091EGE1/47-68_281-318  AC A0A091EGE1
#=GS A0A091EGE1/47-68_281-318  OS Fukomys damarensis
#=GS A0A091EGE1/47-68_281-318  DE Transcription initiation factor TFIID subunit 3
#=GS A0A091EGE1/47-68_281-318  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys; Fukomys damarensis; 
#=GS A0A151NPK3/25-46_253-290  AC A0A151NPK3
#=GS A0A151NPK3/25-46_253-290  OS Alligator mississippiensis
#=GS A0A151NPK3/25-46_253-290  DE Transcription initiation factor TFIID subunit 3 isoform A
#=GS A0A151NPK3/25-46_253-290  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator mississippiensis; 
#=GS A0A151NPS6/25-46_253-289  AC A0A151NPS6
#=GS A0A151NPS6/25-46_253-289  OS Alligator mississippiensis
#=GS A0A151NPS6/25-46_253-289  DE Transcription initiation factor TFIID subunit 3 isoform C
#=GS A0A151NPS6/25-46_253-289  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Crocodylia; Alligatoridae; Alligatorinae; Alligator; Alligator mississippiensis; 
#=GF SQ 8
A0DZH5/1-69                       MYEYYVATAFYHAMLNNFASETSSRMNAMENASKNAGEMLDKLTLEYNKVRQAKITVELCEIISGASAV
H3AJT2/5-26_251-288               KE----ITRRLKSVKN--IQKITKSMKMMDSASKNAGEMIDKLTLTFNRTRQAVITKELIEIISGA---
W5NF94/5-26_233-270               KD----ITIRLKSIKN--IQKITKSMKMMDSASKNASEMIDKLTLTFNRTRQAVITKELIEIISGA---
Q6QI09/5-26_233-270               KD----ITRRLKSIKN--IQKITKSMKMMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGA---
A0A151NPQ9/25-46_253-289          KD----ITRRLKSIRN--IQKITKSMKMMDSASKNASEMIDKLTLTFNRTRQAVITKELIEIISG----
A0A091EGE1/47-68_281-318          KD----ITRRLKSIKN--IQKITKSMKMMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGA---
A0A151NPK3/25-46_253-290          KD----ITRRLKSIRN--IQKITKSMKMMDSASKNASEMIDKLTLTFNRTRQAVITKELIEIISGA---
A0A151NPS6/25-46_253-289          KD----ITRRLKSIRN--IQKITKSMKMMDSASKNASEMIDKLTLTFNRTRQAVITKELIEIISG----
#=GC scorecons                    430000594345553900545554495496599999589699999479659994994994999995000
#=GC scorecons_70                 _______*_______*_________*__**_*****_**_*****_***_***_**_**_*****____
#=GC scorecons_80                 _______*_______*_________*__*__*****_**_*****__*__***_**_**_*****____
#=GC scorecons_90                 _______*_______*_________*__*__*****_**_*****__*__***_**_**_*****____
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