# STOCKHOLM 1.0
#=GF ID 1.10.238.10/FF/000284
#=GF DE RAB11 family interacting protein 4
#=GF AC 1.10.238.10/FF/000284
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 73.461
#=GS Q86YS3/13-95      AC Q86YS3
#=GS Q86YS3/13-95      OS Homo sapiens
#=GS Q86YS3/13-95      DE Rab11 family-interacting protein 4
#=GS Q86YS3/13-95      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q86YS3/13-95      DR GO; GO:0005515; GO:0005615; GO:0005768; GO:0017137; GO:0030139; GO:0030306; GO:0030496; GO:0032154; GO:0032465; GO:0042803; GO:0055038; 
#=GS Q3LGD4/5-95       AC Q3LGD4
#=GS Q3LGD4/5-95       OS Danio rerio
#=GS Q3LGD4/5-95       DE Rab11 family-interacting protein 4A
#=GS Q3LGD4/5-95       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q3LGD4/5-95       DR GO; GO:0005768; GO:0017137; GO:0030139; GO:0030306; GO:0030496; GO:0032154; GO:0032465; GO:0042803; GO:0048592; GO:0051726; GO:0055038; 
#=GS A4IIE8/18-92      AC A4IIE8
#=GS A4IIE8/18-92      OS Xenopus tropicalis
#=GS A4IIE8/18-92      DE Rab11 family-interacting protein 4
#=GS A4IIE8/18-92      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A4IIE8/18-92      DR GO; GO:0005768; GO:0017137; GO:0030139; GO:0030306; GO:0030496; GO:0032154; GO:0032465; GO:0042803; GO:0055038; 
#=GS H9GF61/10-95      AC H9GF61
#=GS H9GF61/10-95      OS Anolis carolinensis
#=GS H9GF61/10-95      DE Uncharacterized protein
#=GS H9GF61/10-95      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS F6ZI91/3-87       AC F6ZI91
#=GS F6ZI91/3-87       OS Monodelphis domestica
#=GS F6ZI91/3-87       DE RAB11 family interacting protein 4
#=GS F6ZI91/3-87       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS A0A2I2US40/13-95  AC A0A2I2US40
#=GS A0A2I2US40/13-95  OS Felis catus
#=GS A0A2I2US40/13-95  DE Uncharacterized protein
#=GS A0A2I2US40/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS F7B0F8/13-95      AC F7B0F8
#=GS F7B0F8/13-95      OS Equus caballus
#=GS F7B0F8/13-95      DE RAB11 family interacting protein 4
#=GS F7B0F8/13-95      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS A0A452FC52/13-95  AC A0A452FC52
#=GS A0A452FC52/13-95  OS Capra hircus
#=GS A0A452FC52/13-95  DE Uncharacterized protein
#=GS A0A452FC52/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Capra; Capra hircus; 
#=GS W5N8R8/2-95       AC W5N8R8
#=GS W5N8R8/2-95       OS Lepisosteus oculatus
#=GS W5N8R8/2-95       DE Uncharacterized protein
#=GS W5N8R8/2-95       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS A0A2U3VWA4/13-95  AC A0A2U3VWA4
#=GS A0A2U3VWA4/13-95  OS Odobenus rosmarus divergens
#=GS A0A2U3VWA4/13-95  DE rab11 family-interacting protein 4 isoform X1
#=GS A0A2U3VWA4/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Odobenidae; Odobenus; Odobenus rosmarus; Odobenus rosmarus divergens; 
#=GS A0A2K6GU72/13-95  AC A0A2K6GU72
#=GS A0A2K6GU72/13-95  OS Propithecus coquereli
#=GS A0A2K6GU72/13-95  DE Uncharacterized protein
#=GS A0A2K6GU72/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus; Propithecus coquereli; 
#=GS H2MRH3/6-89       AC H2MRH3
#=GS H2MRH3/6-89       OS Oryzias latipes
#=GS H2MRH3/6-89       DE Uncharacterized protein
#=GS H2MRH3/6-89       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A2Y9K0P7/13-96  AC A0A2Y9K0P7
#=GS A0A2Y9K0P7/13-96  OS Enhydra lutris kenyoni
#=GS A0A2Y9K0P7/13-96  DE rab11 family-interacting protein 4 isoform X1
#=GS A0A2Y9K0P7/13-96  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Lutrinae; Enhydra; Enhydra lutris; Enhydra lutris kenyoni; 
#=GS A0A3Q7Y6L2/13-96  AC A0A3Q7Y6L2
#=GS A0A3Q7Y6L2/13-96  OS Ursus arctos horribilis
#=GS A0A3Q7Y6L2/13-96  DE rab11 family-interacting protein 4 isoform X1
#=GS A0A3Q7Y6L2/13-96  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus arctos; Ursus arctos horribilis; 
#=GS A0A2K5QTR6/13-95  AC A0A2K5QTR6
#=GS A0A2K5QTR6/13-95  OS Cebus capucinus imitator
#=GS A0A2K5QTR6/13-95  DE Uncharacterized protein
#=GS A0A2K5QTR6/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A096P3P5/13-95  AC A0A096P3P5
#=GS A0A096P3P5/13-95  OS Papio anubis
#=GS A0A096P3P5/13-95  DE Uncharacterized protein
#=GS A0A096P3P5/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS A0A2K6PBV6/13-95  AC A0A2K6PBV6
#=GS A0A2K6PBV6/13-95  OS Rhinopithecus roxellana
#=GS A0A2K6PBV6/13-95  DE Uncharacterized protein
#=GS A0A2K6PBV6/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2K5MFQ2/13-95  AC A0A2K5MFQ2
#=GS A0A2K5MFQ2/13-95  OS Cercocebus atys
#=GS A0A2K5MFQ2/13-95  DE Uncharacterized protein
#=GS A0A2K5MFQ2/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS H2QCM3/13-95      AC H2QCM3
#=GS H2QCM3/13-95      OS Pan troglodytes
#=GS H2QCM3/13-95      DE RAB11 family interacting protein 4
#=GS H2QCM3/13-95      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2I2YM66/3-84   AC A0A2I2YM66
#=GS A0A2I2YM66/3-84   OS Gorilla gorilla gorilla
#=GS A0A2I2YM66/3-84   DE RAB11 family interacting protein 4
#=GS A0A2I2YM66/3-84   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2K6KU62/5-87   AC A0A2K6KU62
#=GS A0A2K6KU62/5-87   OS Rhinopithecus bieti
#=GS A0A2K6KU62/5-87   DE Uncharacterized protein
#=GS A0A2K6KU62/5-87   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS A0A2K6PBZ9/13-95  AC A0A2K6PBZ9
#=GS A0A2K6PBZ9/13-95  OS Rhinopithecus roxellana
#=GS A0A2K6PBZ9/13-95  DE Uncharacterized protein
#=GS A0A2K6PBZ9/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2I3LYZ7/13-95  AC A0A2I3LYZ7
#=GS A0A2I3LYZ7/13-95  OS Papio anubis
#=GS A0A2I3LYZ7/13-95  DE Uncharacterized protein
#=GS A0A2I3LYZ7/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS A0A2K5MFN1/13-95  AC A0A2K5MFN1
#=GS A0A2K5MFN1/13-95  OS Cercocebus atys
#=GS A0A2K5MFN1/13-95  DE Uncharacterized protein
#=GS A0A2K5MFN1/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS M3W581/13-95      AC M3W581
#=GS M3W581/13-95      OS Felis catus
#=GS M3W581/13-95      DE Uncharacterized protein
#=GS M3W581/13-95      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS A0A2I3SA94/13-95  AC A0A2I3SA94
#=GS A0A2I3SA94/13-95  OS Pan troglodytes
#=GS A0A2I3SA94/13-95  DE RAB11 family interacting protein 4
#=GS A0A2I3SA94/13-95  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A3P9LAN6/6-89   AC A0A3P9LAN6
#=GS A0A3P9LAN6/6-89   OS Oryzias latipes
#=GS A0A3P9LAN6/6-89   DE RAB11 family interacting protein 4 (class II) a
#=GS A0A3P9LAN6/6-89   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9HRA4/6-89   AC A0A3P9HRA4
#=GS A0A3P9HRA4/6-89   OS Oryzias latipes
#=GS A0A3P9HRA4/6-89   DE RAB11 family interacting protein 4 (class II) a
#=GS A0A3P9HRA4/6-89   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 28
Q86YS3/13-95              ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
Q3LGD4/5-95               ---VFPDQEQLLAFLKKLKEVFDVCDEDADGYIRVEHFVDLGLQFGQGDEVKKFAKYLDPNAHGRINFKDFCHGVFAIKGCEEILKSALGTPTI---
A4IIE8/18-92              -------------FLQRLRQVFDACDGDADGFIKVEHFVALGLQFAQGDEVKKLAKRLDPNAQGRIGFKDFCHGVLAMKGCDKFVKGI---------
H9GF61/10-95              ------EPPSLAQFLQKLKEVFDVCDEDADGFIRVEHFVALGLQFGQGEEVEKFAKYLDPNDLGKISFKDFCHGVFAIKGCEELLKDTLPAE-----
F6ZI91/3-87               ------------RSVRRLREVFEVCGRDADGFLRVERFVALGLQFGQGEEVEKLVKYLDPNDMGRINFKDFCHGVFAMKGCGEVLKDVLAMESTATL
A0A2I2US40/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
F7B0F8/13-95              ---------ALLRSVRRLREVFEVCGRDPDGLLRVERVAALGLRFGQGEEVEKLVKYLDPNHLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A452FC52/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
W5N8R8/2-95               DGQGSAEQEQLLRFLKKLKEVFDVCDQDAAGYIRVEHFVHLGLQFGQGDEVKKLTKYLDPQALGRINFRDFCHGVFAIKGCEEILKNALGARSA---
A0A2U3VWA4/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2K6GU72/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNHLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
H2MRH3/6-89               ----CSEPDQLLQFLRRLKEVFDVCDEHADGFIRVEHLLELGLQFGQPDEVKKLTRHLYPNAHGKINFKDFCHAVFAIKGCEGLLKAA---------
A0A2Y9K0P7/13-96          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVES----
A0A3Q7Y6L2/13-96          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSMES----
A0A2K5QTR6/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A096P3P5/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2K6PBV6/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2K5MFQ2/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
H2QCM3/13-95              ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2I2YM66/3-84           ----------LLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2K6KU62/5-87           ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2K6PBZ9/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2I3LYZ7/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2K5MFN1/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
M3W581/13-95              ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A2I3SA94/13-95          ---------ALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVE-----
A0A3P9LAN6/6-89           ----CSEPDQLLQFLRRLKEVFDVCDEDADGFIRVEHLLDLGLQFGQPDEVKKLTRHLYPNAHGKINFKDFCHAVFAIKGCEGLLKAD---------
A0A3P9HRA4/6-89           ----CSEPDQLLQFLRRLKEVFDVCDEDADGFIRVEHLLDLGLQFGQPDEVKKLTRHLYPNAHGKINFKDFCHAVFAIKGCEGLLKAA---------
#=GC scorecons            0000001003665567797899789658689768996555999698967996975769698559797989996798969997668955422300000
#=GC scorecons_70         __________*___***********__*_********___***********_**_******__***********************___________
#=GC scorecons_80         ________________**_***_**__*_***_***____***_***__**_**_*_*_**__*********__***_****__**___________
#=GC scorecons_90         _________________*_***_**__*__*__***____***_***__**_*____*_**__*_*_*****__***_***___**___________
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