# STOCKHOLM 1.0
#=GF ID 1.10.1420.10/FF/000026
#=GF DE DNA mismatch repair protein MSH5
#=GF AC 1.10.1420.10/FF/000026
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 52.712
#=GS F4JEP5/183-408      AC F4JEP5
#=GS F4JEP5/183-408      OS Arabidopsis thaliana
#=GS F4JEP5/183-408      DE DNA mismatch repair protein MSH5
#=GS F4JEP5/183-408      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4JEP5/183-408      DR GO; GO:0000794; GO:0007131; GO:0010777; GO:0043073; GO:0045143; GO:0051026; 
#=GS Q6L4V0/187-414      AC Q6L4V0
#=GS Q6L4V0/187-414      OS Oryza sativa Japonica Group
#=GS Q6L4V0/187-414      DE DNA mismatch repair protein MSH5
#=GS Q6L4V0/187-414      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q6L4V0/187-414      DR GO; GO:0000712; GO:0007131; GO:0045143; GO:0051026; 
#=GS A0A1I9LLC7/183-407  AC A0A1I9LLC7
#=GS A0A1I9LLC7/183-407  OS Arabidopsis thaliana
#=GS A0A1I9LLC7/183-407  DE MUTS-homologue 5
#=GS A0A1I9LLC7/183-407  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1I9LLC6/183-407  AC A0A1I9LLC6
#=GS A0A1I9LLC6/183-407  OS Arabidopsis thaliana
#=GS A0A1I9LLC6/183-407  DE MUTS-homologue 5
#=GS A0A1I9LLC6/183-407  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS D7T7Z8/169-389      AC D7T7Z8
#=GS D7T7Z8/169-389      OS Vitis vinifera
#=GS D7T7Z8/169-389      DE Uncharacterized protein
#=GS D7T7Z8/169-389      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A0R0LCR4/167-393  AC A0A0R0LCR4
#=GS A0A0R0LCR4/167-393  OS Glycine max
#=GS A0A0R0LCR4/167-393  DE Uncharacterized protein
#=GS A0A0R0LCR4/167-393  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A078JFI5/180-406  AC A0A078JFI5
#=GS A0A078JFI5/180-406  OS Brassica napus
#=GS A0A078JFI5/180-406  DE BnaCnng46130D protein
#=GS A0A078JFI5/180-406  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS V4NMZ8/183-417      AC V4NMZ8
#=GS V4NMZ8/183-417      OS Eutrema salsugineum
#=GS V4NMZ8/183-417      DE Uncharacterized protein
#=GS V4NMZ8/183-417      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A1J3HQ33/1-228    AC A0A1J3HQ33
#=GS A0A1J3HQ33/1-228    OS Noccaea caerulescens
#=GS A0A1J3HQ33/1-228    DE DNA mismatch repair protein MSH5
#=GS A0A1J3HQ33/1-228    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0I3X2/183-409      AC R0I3X2
#=GS R0I3X2/183-409      OS Capsella rubella
#=GS R0I3X2/183-409      DE Uncharacterized protein
#=GS R0I3X2/183-409      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS G7K3K2/186-410      AC G7K3K2
#=GS G7K3K2/186-410      OS Medicago truncatula
#=GS G7K3K2/186-410      DE DNA mismatch repair protein MutS
#=GS G7K3K2/186-410      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago; Medicago truncatula; 
#=GS A0A0D3CI08/180-406  AC A0A0D3CI08
#=GS A0A0D3CI08/180-406  OS Brassica oleracea var. oleracea
#=GS A0A0D3CI08/180-406  DE Uncharacterized protein
#=GS A0A0D3CI08/180-406  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS D7LB00/183-407      AC D7LB00
#=GS D7LB00/183-407      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LB00/183-407      DE Uncharacterized protein
#=GS D7LB00/183-407      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A1S3UA68/183-407  AC A0A1S3UA68
#=GS A0A1S3UA68/183-407  OS Vigna radiata var. radiata
#=GS A0A1S3UA68/183-407  DE DNA mismatch repair protein MSH5
#=GS A0A1S3UA68/183-407  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS V7B907/183-410      AC V7B907
#=GS V7B907/183-410      OS Phaseolus vulgaris
#=GS V7B907/183-410      DE Uncharacterized protein
#=GS V7B907/183-410      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS I1QDM6/187-415      AC I1QDM6
#=GS I1QDM6/187-415      OS Oryza glaberrima
#=GS I1QDM6/187-415      DE Uncharacterized protein
#=GS I1QDM6/187-415      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0R0L9U5/181-406  AC A0A0R0L9U5
#=GS A0A0R0L9U5/181-406  OS Glycine max
#=GS A0A0R0L9U5/181-406  DE Uncharacterized protein
#=GS A0A0R0L9U5/181-406  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0R0L377/181-407  AC A0A0R0L377
#=GS A0A0R0L377/181-407  OS Glycine max
#=GS A0A0R0L377/181-407  DE Uncharacterized protein
#=GS A0A0R0L377/181-407  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0R0LAV9/167-393  AC A0A0R0LAV9
#=GS A0A0R0LAV9/167-393  OS Glycine max
#=GS A0A0R0LAV9/167-393  DE Uncharacterized protein
#=GS A0A0R0LAV9/167-393  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS V7BBQ3/183-410      AC V7BBQ3
#=GS V7BBQ3/183-410      OS Phaseolus vulgaris
#=GS V7BBQ3/183-410      DE Uncharacterized protein
#=GS V7BBQ3/183-410      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS A0A0R0L340/167-393  AC A0A0R0L340
#=GS A0A0R0L340/167-393  OS Glycine max
#=GS A0A0R0L340/167-393  DE Uncharacterized protein
#=GS A0A0R0L340/167-393  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS K7M4I0/183-408      AC K7M4I0
#=GS K7M4I0/183-408      OS Glycine max
#=GS K7M4I0/183-408      DE Uncharacterized protein
#=GS K7M4I0/183-408      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0R0GHX8/178-403  AC A0A0R0GHX8
#=GS A0A0R0GHX8/178-403  OS Glycine max
#=GS A0A0R0GHX8/178-403  DE Uncharacterized protein
#=GS A0A0R0GHX8/178-403  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 23
F4JEP5/183-408              LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMASLRETLKSVKDISHLL-KKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEGFCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKEK---------
Q6L4V0/187-414              LKLDATAHEALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGKHLLRTWFLRPIIDIDVINNRLNTISFFLCCEDVMSALRGTLKSVRDIPHML-KKFNSPSSFCTSSDWHAFLKCICSLLHINKIFEVGISEHLAIKLQHMNIDLVGKANSSITEELDYVSDLVVGVIDVQRGKEKGYDTLVKDGLCEELDELRMVYEELPDFLEQVSANEIASFPFSFECRKA-------
A0A1I9LLC7/183-407          LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMASLRETLKSVKDISHLL-KKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEGFCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKE----------
A0A1I9LLC6/183-407          LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMASLRETLKSVKDISHLL-KKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEGFCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKE----------
D7T7Z8/169-389              LKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELTVSLRETLKSVKDIPYIL-KKFNSPSSICTSTDWASFLKSVCSLLHVNKIFEVGISESLQEQVKYLNLDIVEKAHSCITTELAYVYELVIGVIDVNRSKEKGYGTLVKEGFCDELDELRQIYEELPEFLEEVSSLELARLPH--------------
A0A0R0LCR4/167-393          LKLDTTAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLL-NKFDSPSSICTSSDWTSLLKSICALLHVNEIFEVGISEGLREELKYLNLDIVEKASSYITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKR--------
A0A078JFI5/180-406          LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAITFFISSIELMTSLRDTLKSVKDISHLL-KKFNSPTSLCTSNDWTAFMKSIGALLRVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDHVYELVLGVIDVTRCKEKGYQTLVKDGFCAELDELRQIYEELPEFLQEVSSMEFEHLPHLHKENL--------
V4NMZ8/183-417              LKLDAAAHEALQIFQSDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMTSLRETLKSVKDISHLL-KKFNSPTSLCTSNDWTAFMKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKEKGYQTLVKEGFCAELDELRQIYEELPEFLQEVSSMELEQFSHLHQEKLPPCIVYIQ
A0A1J3HQ33/1-228            LKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPVLDLEVLDRRLNAISFFISSVELMASLRETVKSVKDISHLL-KKFNSPTSLCTSNDWTSFLKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTEIDYVFELALGVIDVTRSKEKGYQTLVKEGICAELDELRQIYEELPEFLQEVSSMELEHFSHLQKEKLP-------
R0I3X2/183-409              LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMASLRETLKSVKDISHLL-KKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLKEHMRRFNLDIIEKAGLCISTELDYIYELVTGVIDVTRSKERGYQTLVKEGFCAELDELRQIYEELPEFLQEVSAMELEHFPHLHNEKL--------
G7K3K2/186-410              -KLDAASHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRQWFLRPILDLEVLNYRLNSISFFHSSEELVASLRETLKSVKDIPHLL-KKFDSPSSICTSTDWAALLKSISALLHVNKIFEVGISEGLQEELKYLNLDIVEMASSCITTELAYVYELIIGVIDVNRTKEKGYPTVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPDLCKNK---------
A0A0D3CI08/180-406          LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAITFFISSIELMTSLRDTLKSVKDISHLL-KKFNSPTSLCTSNDWTAFMKSIGALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDHVYELVLGVIDVTRCKEKGYQTLVKDGFCAELDELRQIYEGLPEFLQEVSSMEFEHLPHLHKENL--------
D7LB00/183-407              LKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAISFFISSVELMASLRETLKSVKDISHLL-KKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEGFCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKE----------
A0A1S3UA68/183-407          LKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPVLDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLL-KKFDSPSSTCTSSDWAALLKSICALLHVNKIFEVGISEDLREELKYLNLDIVEKASSCITAELGYVYELVIGVIDLNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQHPRLCKD----------
V7B907/183-410              LKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNCISFFLRSEELVASLRETLKSVKDIPHLL-KKFDSPSFTCASSDWTALLKSICALLHVNKIFEVGISEGLREELKYLNLDIVEKASSCITAELGYVYELVIGVIDLNRTKEKGYATVVKEGFCDELDELRQIYEEMPEFLEEVSSLELAELPVLCKDKRV-------
I1QDM6/187-415              LKLDATAHEALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGKHLLRTWFLRPIIDIDVINNRLNTISFFLCCEEVMSALRGTLKSVRDIPHMLKKKFNSPSSFCTSSDWHAFLKCICSLLHINKIFEVGISEHLAIKLQHMNIDLVGKANSSITEELDYVSDLVVGVIDVQRGKEKGYDTLVKDGLCEELDELRMVYEELPDFLEQVSANEIASFPFSFECRKA-------
A0A0R0L9U5/181-406          LKLDTTAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLL-NKFDSPSSICTSSDWTSLLKSICALLHVNEIFEVGISEGLREELKYLNLDIVEKASSYITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDK---------
A0A0R0L377/181-407          LKLDTTAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLL-NKFDSPSSICTSSDWTSLLKSICALLHVNEIFEVGISEGLREELKYLNLDIVEKASSYITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKR--------
A0A0R0LAV9/167-393          LKLDTTAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLL-NKFDSPSSICTSSDWTSLLKSICALLHVNEIFEVGISEGLREELKYLNLDIVEKASSYITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKR--------
V7BBQ3/183-410              LKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNCISFFLRSEELVASLRETLKSVKDIPHLL-KKFDSPSFTCASSDWTALLKSICALLHVNKIFEVGISEGLREELKYLNLDIVEKASSCITAELGYVYELVIGVIDLNRTKEKGYATVVKEGFCDELDELRQIYEEMPEFLEEVSSLELAELPVLCKDKRV-------
A0A0R0L340/167-393          LKLDTTAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLL-NKFDSPSSICTSSDWTSLLKSICALLHVNEIFEVGISEGLREELKYLNLDIVEKASSYITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKR--------
K7M4I0/183-408              LKLDTAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVTSLRETLKSVKDIPLLL-KKFDSPSSICTSFDWTALLKSICAMLHVNKIFEVGISEGLREELKYLNLDIVEKASSHITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDK---------
A0A0R0GHX8/178-403          LKLDTAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVTSLRETLKSVKDIPLLL-KKFDSPSSICTSFDWTALLKSICAMLHVNKIFEVGISEGLREELKYLNLDIVEKASSHITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDK---------
#=GC scorecons              89997689999999959999989999999999999997999699998799959969987978876499959899657587657997989998996779079969967598959966679785789889799999799496656655979777895559659858878986999975949979949699797959999997899889899679965965568464644100000000
#=GC scorecons_70           ***************_***********************************_*************_***_****__*_**__****************_********_***_**_******_***************_***_**__********___**_**_************_*_*****_********_*********************_**___*_*_____________
#=GC scorecons_80           ****__*********_*************************_*********_**_*********__***_****__*_**__***_********_***_***_**_*_***_**___****_***************_*_______********___*__**_**_***_*****_*_*****_*_******_******_*********_***__*____*_______________
#=GC scorecons_90           ****__*********_*****_***************_***_****__***_**_***_*__*___***_*_**____*____**_*****_**___*__**_**___***_**____*_*__***_*_*****_**_*_______*_*___**___*__**_**__**_****__*_**_**_*_**_*_*_******__*****_**__**__*____________________
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