# STOCKHOLM 1.0 #=GF ID 1.10.1420.10/FF/000021 #=GF DE DNA mismatch repair protein MSH2 #=GF AC 1.10.1420.10/FF/000021 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 62.953 #=GS O24617/523-616 AC O24617 #=GS O24617/523-616 OS Arabidopsis thaliana #=GS O24617/523-616 DE DNA mismatch repair protein MSH2 #=GS O24617/523-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS O24617/523-616 DR GO; GO:0003684; GO:0005515; GO:0005886; GO:0006290; GO:0006298; GO:0030983; GO:0045128; #=GS B9FNL5/513-617 AC B9FNL5 #=GS B9FNL5/513-617 OS Oryza sativa Japonica Group #=GS B9FNL5/513-617 DE Os05g0274200 protein #=GS B9FNL5/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS V7CAI4/523-617 AC V7CAI4 #=GS V7CAI4/523-617 OS Phaseolus vulgaris #=GS V7CAI4/523-617 DE Uncharacterized protein #=GS V7CAI4/523-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; #=GS B9I2Q3/524-618 AC B9I2Q3 #=GS B9I2Q3/524-618 OS Populus trichocarpa #=GS B9I2Q3/524-618 DE Uncharacterized protein #=GS B9I2Q3/524-618 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A0D3BBZ6/524-616 AC A0A0D3BBZ6 #=GS A0A0D3BBZ6/524-616 OS Brassica oleracea var. oleracea #=GS A0A0D3BBZ6/524-616 DE Uncharacterized protein #=GS A0A0D3BBZ6/524-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS V4M6V1/523-616 AC V4M6V1 #=GS V4M6V1/523-616 OS Eutrema salsugineum #=GS V4M6V1/523-616 DE Uncharacterized protein #=GS V4M6V1/523-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS R0G3A0/523-616 AC R0G3A0 #=GS R0G3A0/523-616 OS Capsella rubella #=GS R0G3A0/523-616 DE Uncharacterized protein #=GS R0G3A0/523-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS Q9XGC9/508-617 AC Q9XGC9 #=GS Q9XGC9/508-617 OS Zea mays #=GS Q9XGC9/508-617 DE DNA mismatch repair protein MSH2 #=GS Q9XGC9/508-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1MUG2/524-617 AC I1MUG2 #=GS I1MUG2/524-617 OS Glycine max #=GS I1MUG2/524-617 DE Uncharacterized protein #=GS I1MUG2/524-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A1S3UWU1/523-616 AC A0A1S3UWU1 #=GS A0A1S3UWU1/523-616 OS Vigna radiata var. radiata #=GS A0A1S3UWU1/523-616 DE DNA mismatch repair protein MSH2 #=GS A0A1S3UWU1/523-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; #=GS A0A151SLK0/520-613 AC A0A151SLK0 #=GS A0A151SLK0/520-613 OS Cajanus cajan #=GS A0A151SLK0/520-613 DE DNA mismatch repair protein Msh2 #=GS A0A151SLK0/520-613 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; #=GS A0A078ITW7/524-616 AC A0A078ITW7 #=GS A0A078ITW7/524-616 OS Brassica napus #=GS A0A078ITW7/524-616 DE BnaCnng23780D protein #=GS A0A078ITW7/524-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4CBX9/524-616 AC M4CBX9 #=GS M4CBX9/524-616 OS Brassica rapa subsp. pekinensis #=GS M4CBX9/524-616 DE Uncharacterized protein #=GS M4CBX9/524-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS D7L8J3/522-616 AC D7L8J3 #=GS D7L8J3/522-616 OS Arabidopsis lyrata subsp. lyrata #=GS D7L8J3/522-616 DE Uncharacterized protein #=GS D7L8J3/522-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A0S3R7J8/523-616 AC A0A0S3R7J8 #=GS A0A0S3R7J8/523-616 OS Vigna angularis var. angularis #=GS A0A0S3R7J8/523-616 DE Uncharacterized protein #=GS A0A0S3R7J8/523-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; Vigna angularis var. angularis; #=GS A0A3P6AVR1/524-616 AC A0A3P6AVR1 #=GS A0A3P6AVR1/524-616 OS Brassica oleracea #=GS A0A3P6AVR1/524-616 DE Uncharacterized protein #=GS A0A3P6AVR1/524-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; #=GS C5XD67/510-617 AC C5XD67 #=GS C5XD67/510-617 OS Sorghum bicolor #=GS C5XD67/510-617 DE Uncharacterized protein #=GS C5XD67/510-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A0B2PS69/524-617 AC A0A0B2PS69 #=GS A0A0B2PS69/524-617 OS Glycine soja #=GS A0A0B2PS69/524-617 DE DNA mismatch repair protein MSH2 isoform A #=GS A0A0B2PS69/524-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A0L9TR92/523-616 AC A0A0L9TR92 #=GS A0A0L9TR92/523-616 OS Vigna angularis #=GS A0A0L9TR92/523-616 DE Uncharacterized protein #=GS A0A0L9TR92/523-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; #=GS A0A0D9WY38/509-617 AC A0A0D9WY38 #=GS A0A0D9WY38/509-617 OS Leersia perrieri #=GS A0A0D9WY38/509-617 DE Uncharacterized protein #=GS A0A0D9WY38/509-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0D3G5D9/513-617 AC A0A0D3G5D9 #=GS A0A0D3G5D9/513-617 OS Oryza barthii #=GS A0A0D3G5D9/513-617 DE Uncharacterized protein #=GS A0A0D3G5D9/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0D9ZWK6/513-617 AC A0A0D9ZWK6 #=GS A0A0D9ZWK6/513-617 OS Oryza glumipatula #=GS A0A0D9ZWK6/513-617 DE Uncharacterized protein #=GS A0A0D9ZWK6/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS J3M5K3/514-617 AC J3M5K3 #=GS J3M5K3/514-617 OS Oryza brachyantha #=GS J3M5K3/514-617 DE Uncharacterized protein #=GS J3M5K3/514-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; #=GS I1PTY8/509-617 AC I1PTY8 #=GS I1PTY8/509-617 OS Oryza glaberrima #=GS I1PTY8/509-617 DE Uncharacterized protein #=GS I1PTY8/509-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A0E0L0G2/511-616 AC A0A0E0L0G2 #=GS A0A0E0L0G2/511-616 OS Oryza punctata #=GS A0A0E0L0G2/511-616 DE Uncharacterized protein #=GS A0A0E0L0G2/511-616 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0PJZ0/513-617 AC A0A0E0PJZ0 #=GS A0A0E0PJZ0/513-617 OS Oryza rufipogon #=GS A0A0E0PJZ0/513-617 DE Uncharacterized protein #=GS A0A0E0PJZ0/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0HBR7/513-617 AC A0A0E0HBR7 #=GS A0A0E0HBR7/513-617 OS Oryza sativa f. spontanea #=GS A0A0E0HBR7/513-617 DE Uncharacterized protein #=GS A0A0E0HBR7/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS B8AW22/513-617 AC B8AW22 #=GS B8AW22/513-617 OS Oryza sativa Indica Group #=GS B8AW22/513-617 DE Uncharacterized protein #=GS B8AW22/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0D9WY41/509-617 AC A0A0D9WY41 #=GS A0A0D9WY41/509-617 OS Leersia perrieri #=GS A0A0D9WY41/509-617 DE Uncharacterized protein #=GS A0A0D9WY41/509-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0D9WY40/513-617 AC A0A0D9WY40 #=GS A0A0D9WY40/513-617 OS Leersia perrieri #=GS A0A0D9WY40/513-617 DE Uncharacterized protein #=GS A0A0D9WY40/513-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A1D6IIM1/508-617 AC A0A1D6IIM1 #=GS A0A1D6IIM1/508-617 OS Zea mays #=GS A0A1D6IIM1/508-617 DE MutS homolog1 #=GS A0A1D6IIM1/508-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6IIM0/508-617 AC A0A1D6IIM0 #=GS A0A1D6IIM0/508-617 OS Zea mays #=GS A0A1D6IIM0/508-617 DE MutS homolog1 #=GS A0A1D6IIM0/508-617 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 32 O24617/523-616 ----------------KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPY B9FNL5/513-617 -----GQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY V7CAI4/523-617 ---------------KKEEPKIRKKLNTQFIVLETRKDGVKFTNTKLKKLGDKYLQILEEYKSCQKKLVDKVVQTATTFSEVFESLAEIISELDVLLSFADLASSSPTPY B9I2Q3/524-618 ---------------KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKIVENYKSRQKELVSRVVQITATFSEVFEKLSGLLSEMDVLLSFADLASSCPTPY A0A0D3BBZ6/524-616 -----------------EEPKIRKKLTTQFLVLETRKDGVKFTNTKLKKLGDQYQSVVEDYKSCQKELVDRVVQTVASFSEVFEELAGMLSEMDVLLSFADLAASCPTPY V4M6V1/523-616 ----------------KEEPKIRKKLTTQFVVLETRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVASFSEVFEELAGLLSEMDVLLSFADLAASCPTPY R0G3A0/523-616 ----------------KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDYRNCQKELVDRVVQTVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPY Q9XGC9/508-617 LKLEKGSLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPY I1MUG2/524-617 ----------------KEEPKIRKKLNTQFIILETRKDGVKFTNTKLKKLGDQYQQILEEYKSCQKKLVDRVVQTAATFSEVFESLAEIISELDVLLSFADLASSCPTPY A0A1S3UWU1/523-616 ----------------KEEPKIRKKLNTQFIVLETRKDGVKFTNTKLKKLGDKYQQILEEYKNCQKKLVDKVVETATTFSQVFESLAEIISELDVLLSFADLASSCPTPY A0A151SLK0/520-613 ----------------KEEPKIRKKLNTQFIVLETRKDGVKFTNTKLKKLGDQYQQVLEEYKICQKKLVDRVVQTATTFSEVFESLAEIISELDVLLSFADLASSCPTPY A0A078ITW7/524-616 -----------------EEPKIRKKLTTQFLVLETRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVASFSEVFEELAGMLSEMDVLLSFADLAASCPTPY M4CBX9/524-616 -----------------EEPKIRKKLTTQFLVLETRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVASFSEVFEELAGMLSEMDVLLSFADLAASCPTPY D7L8J3/522-616 ---------------KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVTSFSEVFEELAGLLSEMDVLLSFADLAASCPTPY A0A0S3R7J8/523-616 ----------------KEEPKIRKKLNTQFIVLETRKDGVKFTNTKLKKLGDKYQQILEEYKNCQKKLVDKVVQTATTFSQVFESLAEIISELDVLLSFADLASSCPTPY A0A3P6AVR1/524-616 -----------------EEPKIRKKLTTQFLVLETRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVASFSEVFEELAGMLSEMDVLLSFADLAASCPTPY C5XD67/510-617 --LEKGPLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTSSKLKKLSDQYQALFAEYTSCQKKVVGDVVRVSGSYSEVFENFAAVLSELDVLQSFADLATSCPVPY A0A0B2PS69/524-617 ----------------KEEPKIRKKLNTQFIILETRKDGVKFTNTKLKKLGDQYQQILEEYKSCQKKLVDRVVQTAATFSEVFESLAEIISELDVLLSFADLASSCPTPY A0A0L9TR92/523-616 ----------------KEEPKIRKKLNTQFIVLETRKDGVKFTNTKLKKLGDKYQQILEEYKNCQKKLVDKVVQTATTFSQVFESLAEIISELDVLLSFADLASSCPTPY A0A0D9WY38/509-617 -KLEKGLLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTRSKLKNLGDQYQALFGEYTSCQKKVVDDVVEVSATFSEVFENFAAILSELDVLQSFADLATSCPIPY A0A0D3G5D9/513-617 -----GQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY A0A0D9ZWK6/513-617 -----GQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY J3M5K3/514-617 ------SIGHVFRISKKDEQKVRKKLTNNYIIIETRKDGVKFTSSKLKNLGDQYQALFGEYTSCQKKVVDDVVKVSATFSEVFENFAAILSELDVLQSFADLATSCPIPY I1PTY8/509-617 -KLEKGQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY A0A0E0L0G2/511-616 ----KGQLGHVFRISKKDEQKVRRKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVKVSASFSEVFENFAAILSELDVLQSFADLATSCPIPY A0A0E0PJZ0/513-617 -----GQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY A0A0E0HBR7/513-617 -----GQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY B8AW22/513-617 -----GQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPY A0A0D9WY41/509-617 -KLEKGLLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTRSKLKNLGDQYQALFGEYTSCQKKVVDDVVEVSATFSEVFENFAAILSELDVLQSFADLATSCPIPY A0A0D9WY40/513-617 -----GLLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTRSKLKNLGDQYQALFGEYTSCQKKVVDDVVEVSATFSEVFENFAAILSELDVLQSFADLATSCPIPY A0A1D6IIM1/508-617 LKLEKGSLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPY A0A1D6IIM0/508-617 LKLEKGSLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPY #=GC scorecons 00000101222221236795979899755767699999999995699979797984655795789966975995556689899956856799799959999995979599 #=GC scorecons_70 ________________***_*******__**************__**********____**_********_**_____******_**__*******_******_***_** #=GC scorecons_80 _________________**_*_****___*___**********__***_******____**_****__**_**_____******__*__*******_******_*_*_** #=GC scorecons_90 __________________*_*_****_______**********__***_*_*_**_____*__***__*__**_____******__*___**_***_******_*_*_** //