# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000728
#=GF DE Transcription factor protein
#=GF AC 1.10.10.60/FF/000728
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.784
#=GS Q4H3C6/87-169   AC Q4H3C6
#=GS Q4H3C6/87-169   OS Ciona intestinalis
#=GS Q4H3C6/87-169   DE Transcription factor protein
#=GS Q4H3C6/87-169   DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS H2YDE6/86-168   AC H2YDE6
#=GS H2YDE6/86-168   OS Ciona savignyi
#=GS H2YDE6/86-168   DE Uncharacterized protein
#=GS H2YDE6/86-168   DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS F6UZE4/86-169   AC F6UZE4
#=GS F6UZE4/86-169   OS Ciona intestinalis
#=GS F6UZE4/86-169   DE Uncharacterized protein
#=GS F6UZE4/86-169   DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS H2YNN6/110-191  AC H2YNN6
#=GS H2YNN6/110-191  OS Ciona savignyi
#=GS H2YNN6/110-191  DE Uncharacterized protein
#=GS H2YNN6/110-191  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS O18313/121-202  AC O18313
#=GS O18313/121-202  OS Ciona intestinalis
#=GS O18313/121-202  DE Hox 5
#=GS O18313/121-202  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 5
Q4H3C6/87-169           --PPVVYPWMKRIHVSQVINGLESGKRPRTAYTRHQVLELEKEFHYNRYLTRRRRIEIAHGLCLSERQVKIWFQNRRMKWKKDHK
H2YDE6/86-168           --PPVVYPWMKRIHVSQVINGLESGKRPRTAYTRHQVLELEKEFHYNRYLTRRRRIEIAHGLCLSERQVKIWFQNRRMKWKKDHK
F6UZE4/86-169           -GPPVVYPWMKRIHVSQVINGLESGKRPRTAYTRHQVLELEKEFHYNRYLTRRRRIEIAHGLCLSERQVKIWFQNRRMKWKKDHK
H2YNN6/110-191          DNDATIYPWMKRIHGGEA---PDPSKRTRTAYTRHQTLELEKEFHYNRYLTRRRRIEVAHTLALTERQIKIWFQNRRMKWKKENK
O18313/121-202          DRDAIIYPWMKRIHGGET---PDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKIWFQNRRMKWKKENK
#=GC scorecons          1145569999999945541115655995999999795999999999999999999996995959599969999999999999659
#=GC scorecons_70       _____*********________*__**_********_***********************_*_*_******************_*
#=GC scorecons_80       ______********___________**_********_********************_**_*_*_***_*************__*
#=GC scorecons_90       ______********___________**_******_*_********************_**_*_*_***_*************__*
//