# STOCKHOLM 1.0
#=GF ID 3.40.50.620/FF/86233
#=GF DE Cysteine--tRNA ligase 1
#=GF AC 3.40.50.620/FF/86233
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 57.849
#=GS E3J8M6/1-312      AC E3J8M6
#=GS E3J8M6/1-312      OS Frankia inefficax
#=GS E3J8M6/1-312      DE Cysteine--tRNA ligase
#=GS E3J8M6/1-312      DR GENE3D; 274dd97d417eceaee514274e91350801/1-312; 
#=GS E3J8M6/1-312      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia inefficax; 
#=GS E3J8M6/1-312      DR EC; 6.1.1.16; 
#=GS A0A0P7BYF4/1-307  AC A0A0P7BYF4
#=GS A0A0P7BYF4/1-307  OS Frankia sp. R43
#=GS A0A0P7BYF4/1-307  DE Cysteine--tRNA ligase
#=GS A0A0P7BYF4/1-307  DR GENE3D; 2e9458d2e602100bf34acd4ad9f27a6d/1-307; 
#=GS A0A0P7BYF4/1-307  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. R43; 
#=GS A0A0P7BYF4/1-307  DR EC; 6.1.1.16; 
#=GS Q83GF1/1-306      AC Q83GF1
#=GS Q83GF1/1-306      OS Tropheryma whipplei str. Twist
#=GS Q83GF1/1-306      DE Cysteine--tRNA ligase 1
#=GS Q83GF1/1-306      DR GENE3D; 3b21c803354ea9409af47569f139794f/1-306; 
#=GS Q83GF1/1-306      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Tropheryma; Tropheryma whipplei; 
#=GS Q83GF1/1-306      DR EC; 6.1.1.16; 
#=GS Q83HS8/1-306      AC Q83HS8
#=GS Q83HS8/1-306      OS Tropheryma whipplei TW08/27
#=GS Q83HS8/1-306      DE Cysteine--tRNA ligase 1
#=GS Q83HS8/1-306      DR GENE3D; 3b21c803354ea9409af47569f139794f/1-306; 
#=GS Q83HS8/1-306      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Tropheryma; Tropheryma whipplei; 
#=GS Q83HS8/1-306      DR EC; 6.1.1.16; 
#=GS Q0RBP0/1-255      AC Q0RBP0
#=GS Q0RBP0/1-255      OS Frankia alni ACN14a
#=GS Q0RBP0/1-255      DE Cysteine--tRNA ligase
#=GS Q0RBP0/1-255      DR GENE3D; 5e16871ec3064e00f5b4e36377a3c799/1-255; 
#=GS Q0RBP0/1-255      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia alni; 
#=GS Q0RBP0/1-255      DR EC; 6.1.1.16; 
#=GS A0A0Q1D321/1-310  AC A0A0Q1D321
#=GS A0A0Q1D321/1-310  OS Frankia sp. ACN1ag
#=GS A0A0Q1D321/1-310  DE Cysteine--tRNA ligase
#=GS A0A0Q1D321/1-310  DR GENE3D; 67e4466f1673bbcd9fdcfac002dca048/1-310; 
#=GS A0A0Q1D321/1-310  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. ACN1ag; 
#=GS A0A0Q1D321/1-310  DR EC; 6.1.1.16; 
#=GS A0A0D8BJZ1/1-310  AC A0A0D8BJZ1
#=GS A0A0D8BJZ1/1-310  OS Frankia sp. CpI1-S
#=GS A0A0D8BJZ1/1-310  DE Cysteine--tRNA ligase
#=GS A0A0D8BJZ1/1-310  DR GENE3D; 67e4466f1673bbcd9fdcfac002dca048/1-310; 
#=GS A0A0D8BJZ1/1-310  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. CpI1-S; 
#=GS A0A0D8BJZ1/1-310  DR EC; 6.1.1.16; 
#=GS I9KM40/1-310      AC I9KM40
#=GS I9KM40/1-310      OS Frankia sp. QA3
#=GS I9KM40/1-310      DE Cysteine--tRNA ligase
#=GS I9KM40/1-310      DR GENE3D; 8f838d1fe0765dd2e6d9776a5d78f56c/1-310; 
#=GS I9KM40/1-310      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. QA3; 
#=GS I9KM40/1-310      DR EC; 6.1.1.16; 
#=GS D3DC64/1-307      AC D3DC64
#=GS D3DC64/1-307      OS Frankia sp. EUN1f
#=GS D3DC64/1-307      DE Cysteine--tRNA ligase
#=GS D3DC64/1-307      DR GENE3D; 94967214c975ea1c5ee2d99908b9cb71/1-307; 
#=GS D3DC64/1-307      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. EUN1f; 
#=GS D3DC64/1-307      DR EC; 6.1.1.16; 
#=GS A8LF87/1-332      AC A8LF87
#=GS A8LF87/1-332      OS Frankia sp. EAN1pec
#=GS A8LF87/1-332      DE Cysteine--tRNA ligase
#=GS A8LF87/1-332      DR GENE3D; 9ee8e51f4bdbf4289ff83e986fdf35df/1-332; 
#=GS A8LF87/1-332      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. EAN1pec; 
#=GS A8LF87/1-332      DR EC; 6.1.1.16; 
#=GS A0A166R4W4/1-307  AC A0A166R4W4
#=GS A0A166R4W4/1-307  OS Frankia sp. EI5c
#=GS A0A166R4W4/1-307  DE Cysteine--tRNA ligase
#=GS A0A166R4W4/1-307  DR GENE3D; c13560a7e2de193e76deb2ef4b714962/1-307; 
#=GS A0A166R4W4/1-307  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. EI5c; 
#=GS A0A166R4W4/1-307  DR EC; 6.1.1.16; 
#=GS A0A0S4QTN4/1-307  AC A0A0S4QTN4
#=GS A0A0S4QTN4/1-307  OS Frankia sp. G2
#=GS A0A0S4QTN4/1-307  DE Cysteine--tRNA ligase
#=GS A0A0S4QTN4/1-307  DR GENE3D; c29803050ea48512dcc4772160694919/1-307; 
#=GS A0A0S4QTN4/1-307  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia sp. G2; 
#=GS A0A0S4QTN4/1-307  DR EC; 6.1.1.16; 
#=GS F8AXW4/1-312      AC F8AXW4
#=GS F8AXW4/1-312      OS Frankia symbiont of Datisca glomerata
#=GS F8AXW4/1-312      DE Cysteine--tRNA ligase
#=GS F8AXW4/1-312      DR GENE3D; edeee193d13134a8ab869fa03eacabc2/1-312; 
#=GS F8AXW4/1-312      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia symbiont of Datisca glomerata; 
#=GS F8AXW4/1-312      DR EC; 6.1.1.16; 
#=GF TC 522.7 8.5E-161
#=GF SQ 13
E3J8M6/1-312              MSLHLYDTRTRRVRPFEPLRPGHVGVYVCGPTVQSAPHVGHLRSAVAFDLLRRWLLESGYAVTYVQNVTDIDDKIIVNA--DREGVSVWELATRETRSFDDAYRAVGILPPTIQPRATGHIPEMFALIGELMAAGYAY---EGDGSVWFRVGRFGDYGALSNQRPDAMQASAEVEAGKEDPRDFALWKAARPGEP---AWDSPWGSGRPGWHLECSAMAGKYLGDVFDIHGGGLDLVFPHHENERAQTVCASAARAH--------------------DGSGEPEMARYWMHVGLLTTGGTKMSKSLGNSFFVTDALAQVRPQVLRYHLLSAHYRSSLEYS
A0A0P7BYF4/1-307          MGLRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTGLAFDLLRRWLTQSGLSVTFVQNVTDIDDKIIINA--DRAGTTVWELATRQTRAFDEAYRAVGVLPPTISPLATGHIPEMLEMISVLVERGFAY---PGAGSVWFRVGAFADYGALSHQRPASMHPSPEAEPGKADPRDFALWKAVKPGEP---SWSSPWGPGRPGWHLECSAMAGKYLGGVFDIHGGGLDLVFPHHENERAQTVCAA-------------------------GGPAGGEMANYWMHIGLLTTGGTKMSKSLGNSFFVTDALATVRPQVLRYHLLSAHYRSSLEYS
Q83GF1/1-306              MTLNLYDTLSRRIVTLDC--RDRVELYVCGPTVQSPPHIGHMRSGVVYDCLRRWLEYKGLPVLYVRNITDIDDKILASARSTETGETWWQIAYRVSGLFNEAYKALFVKPPDYEPLVTAHIPDIIKAIEILIQKNVAYRAMDGSGNVFFSIDKHPSYGELTDQKDLLIDDC--ITPGKRDPRDFTLWKEKKDTDPDLAFWESPWGPGRPGWHIECSVMATKYLGTRFAIHGGGVDLRFPHHENELAQ------------------------------ARALGAHFADIWMHTGAVNVEGIKMSKSFGNSVLVQDALSKVSPSALRYYFLTAHYRSTLNYT
Q83HS8/1-306              MTLNLYDTLSRRIVTLDC--RDRVELYVCGPTVQSPPHIGHMRSGVVYDCLRRWLEYKGLPVLYVRNITDIDDKILASARSTETGETWWQIAYRVSGLFNEAYKALFVKPPDYEPLVTAHIPDIIKAIEILIQKNVAYRAMDGSGNVFFSIDKHPSYGELTDQKDLLIDDC--ITPGKRDPRDFTLWKEKKDTDPDLAFWESPWGPGRPGWHIECSVMATKYLGTRFAIHGGGVDLRFPHHENELAQ------------------------------ARALGAHFADIWMHTGAVNVEGIKMSKSFGNSVLVQDALSKVSPSALRYYFLTAHYRSTLNYT
Q0RBP0/1-255              -------------------------------------------------------MQSEHEVTLVQNVTDIDDKIIVNA--DRDGTSVWELATRQTRAFDDAYRTIGILPPTIQPRATGHIPEMIALISALIAGGHAY---AGAGSVWFRVGSFPGYGALSHQRPDSMLPSAESEPGKADPRDFALWKAARPGEP---FWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVFPHHENERAQTVCAAGGA----------------------AGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVRPQVLRYHLLSAHYRSTLEYT
A0A0Q1D321/1-310          MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQSPPHVGHVRTALPFDLLRRWLVQSGHEVTLVQNVTDIDDKIIINA--DRDGTSVWELATRQTRAFDDAYRTIGILPPTIQPRATGHIPEMIALISALIAGGHAY---AGAGSVWFRVGSFAEYGVLSHQRPDAMLPSAESEPGKADPRDFALWKAARPGEP---FWSSPWGDGRPGWHLECSAMAGKYLGPAFDIHGGGLDLVFPHHENERAQTVCAAGGA----------------------GGGAAGEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALDVVRPQVLRYHLLSAHYRSTLEYT
A0A0D8BJZ1/1-310          MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQSPPHVGHVRTALPFDLLRRWLVQSGHEVTLVQNVTDIDDKIIINA--DRDGTSVWELATRQTRAFDDAYRTIGILPPTIQPRATGHIPEMIALISALIAGGHAY---AGAGSVWFRVGSFAEYGVLSHQRPDAMLPSAESEPGKADPRDFALWKAARPGEP---FWSSPWGDGRPGWHLECSAMAGKYLGPAFDIHGGGLDLVFPHHENERAQTVCAAGGA----------------------GGGAAGEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALDVVRPQVLRYHLLSAHYRSTLEYT
I9KM40/1-310              MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQSPPHVGHVRTALPFDLLRRWLVQSGHEVTLVQNVTDIDDKIIINA--DRDGTSVWELATRQTRAFDDAYRTIGILPPTIQPRATGHIPEMIALISALIDGGYAY---AGGGSVWFRVGFFAGYGALSHQRPDAMLPSAESEPGKADPRDFALWKAARPGEP---FWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVFPHHENERAQTVCAAGGA----------------------AAGETGEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALDAVRPQVLRYHLLSAHYRSTLEYT
D3DC64/1-307              MGLRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTGLAFDLLRRWLTQSGLSVTFVQNVTDIDDKIIINA--DQAGTTVWELATRQTRAFDEAYRAVGVLPPTISPLATGHIPEMLEMISVLVERGFAY---PGAGSVWFRVGAFADYGALSHQRPASMHPSPEAEPGKADPRDFALWKAVKPGEP---SWSSPWGPGRPGWHLECSAMAGKYLGGVFDIHGGGLDLVFPHHENERAQTVCAA-------------------------GGPAGGEMANYWMHIGLLTTGGTKMSKSLGNSFFVTDALAAVRPQVLRYHLLSAHYRSSLEYS
A8LF87/1-332              MGLHLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTALAFDLLRRWLTQSGLSVTFVQNVTDIDDKIIVNA--DRAGTSVWELATRQTRAFEDAYRAVGILPPTISPRATGHIPEMLEMIAVLVERGFAY---PGAGSVWFRVGAFADYGALSHQRPAAMHPSPESEPGKADPRDFALWKAVKPGEP---SWSSPWGPGRPGWHLECSAMVGKYLGDVFDIHGGGLDLVFPHHENERAQSVCAAELAAAGAAPAAASSRGAVAAGADVPGAGGAGEMARYWMHVGLLTTGGTKMSKSLGNSFFVTDALAAVRPQVLRYHLLSAHYRSSLEYS
A0A166R4W4/1-307          MGLRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTALAFDLLRRWLTQSGLSVTFVQNVTDIDDKIILNA--DRAGTTVWELATRQTRAFDEAYRAVGVLPPTISPLATGHIPEMLEMISGLVERGFAY---PGAGSVWFRVGAFADYGALSHQRPASMHPSPEAEPGKADPRDFALWKAAKPGEP---SWASPWGPGRPGWHLECSAMAGKYLGAEFDIHGGGLDLVFPHHENERAQTICAA-------------------------GGPTGAEMANYWMHVGLLTTGGTKMSKSLGNSFFVTDALAAVRPQVLRYHLLSAHYRSSLEYS
A0A0S4QTN4/1-307          MGLRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTGLAFDLLRRWLTQSGLSVTFVQNVTDIDDKIIINA--DRAGTTVWELATRQTRAFDEAYRAVGVLPPTISPLATGHIPEMLEMISVLVERGFAY---PGAGSVWFRVGAFADYGALSHQRPASMHPSPEAEPGKADPRDFALWKAVKPGEP---SWSSPWGPGRPGWHLECSAMAGKYLGGVFDIHGGGLDLVFPHHENERAQTVCAA-------------------------GGPAGGEMANYWMHIGLLTTGGTKMSKSLGNSFFVTDALATVRPQVLRYHLLSAHYRSSLEYS
F8AXW4/1-312              MGLHIYDTRTRRLRPFEPLRPGHVSVYVCGPTVQSPPHVGHIRTAVAFDLLRRWLVASGLEVTFVQNVTDIDDKIIINA--SRAGESVWELATRQTRAFDDAYRAVGVLPPTIQPRATGHIPEMLALIGRLVDTGYAY---PGGGSVWFRVSRFAGYGGLSHQRPEAVQASPECDEGKVDPRDFALWKGAKPGEP---FWESPWGRGRPGWHIECSAMAGKYLGEVFDIHGGGLDLVFPHHENERAQSASAAHSHGG--------------------AGGGAPQMARYWMHVGLLTTGGTKMSKSLGNSFLVSDAFEQVRPQVLRYHLLSAHYRSSLEYT
#=GC scorecons            6464666643665455343345564566666666666656646444356466666346754965969799999996569005649565966959566596799765575996549469699977644943964464990004959696967636549949659753463463445799499999699954756790004959999499999969996986999934969999969959999999599344441110000000000000000000000554354669459995966666969999969995694998439696699976969999969696
#=GC scorecons_70         *_*_****__**___________*__*********_**_**_*_____*_*****___*__*__************_**_____*___****_*_**_*******__*_**___*_********___*__**__*_**____*_***_*_*__*__**_**_**___*__*____***_*********__*_***____*_****_******************__*_********_*******_**_____________________________________**__***_*_***************_**_***__*_*_*************_***_
#=GC scorecons_80         __________________________________________________________*__*__*_*********___*_____*___*__*_*____*__***_____**___*__*_*****___*__*_____**____*_*_*_*_*_____**_*__**___________***_*****_***_____**____*_****_******_***_**_****__*_*****_**_*******_**______________________________________*__***_*_____*_*****_***__*_***__*_*__****_*_*****_*_*_
#=GC scorecons_90         _____________________________________________________________*__*_*_*******___*_____*___*__*_*____*__**______**___*__*_***_____*__*_____**____*_*_*_*_______**_*__*_____________**_*****_***______*____*_****_******_***_**_****__*_*****_**_*******_**______________________________________*__***_*_____*_*****_***__*_***__*_*__***__*_*****_*_*_
//