PDB 6gml

PDB Links
Overview

PDB Information

PDB	6GML
Method	ELECTRON MICROSCOPY
Host Organism	Trichoplusia ni
Gene Source	Homo sapiens
Primary Citation	Structure of paused transcription complex Pol II-DSIF-NELF. Vos, S.M., Farnung, L., Urlaub, H., Cramer, P. Nature
Header	Transcription
Released	2018-05-27
Resolution	3.200
CATH Insert Date	09 Sep, 2018

PDB Images (35)

6gml

PDB 6gml

6gmlA

PDB Chain 6gmlA

6gmlB

PDB Chain 6gmlB

6gmlC

PDB Chain 6gmlC

6gmlD

PDB Chain 6gmlD

6gmlE

PDB Chain 6gmlE

6gmlF

PDB Chain 6gmlF

6gmlG

PDB Chain 6gmlG

6gmlH

PDB Chain 6gmlH

6gmlI

PDB Chain 6gmlI

6gmlJ

PDB Chain 6gmlJ

6gmlK

PDB Chain 6gmlK

6gmlL

PDB Chain 6gmlL

6gmlN

PDB Chain 6gmlN

6gmlP

PDB Chain 6gmlP

6gmlT

PDB Chain 6gmlT

6gmlU

PDB Chain 6gmlU

6gmlV

PDB Chain 6gmlV

6gmlW

PDB Chain 6gmlW

6gmlX

PDB Chain 6gmlX

6gmlY

PDB Chain 6gmlY

6gmlZ

PDB Chain 6gmlZ

6gmlC01

CATH Domain 6gmlC01

6gmlC02

CATH Domain 6gmlC02

6gmlD00

CATH Domain 6gmlD00

6gmlE01

CATH Domain 6gmlE01

6gmlE02

CATH Domain 6gmlE02

6gmlF00

CATH Domain 6gmlF00

6gmlG01

CATH Domain 6gmlG01

6gmlG02

CATH Domain 6gmlG02

6gmlH01

CATH Domain 6gmlH01

6gmlJ00

CATH Domain 6gmlJ00

6gmlK00

CATH Domain 6gmlK00

6gmlL00

CATH Domain 6gmlL00

6gmlY01

CATH Domain 6gmlY01

PDB Prints

PDB Chains (21)

Chain ID	Date inserted into CATH	CATH Status
A	09 Sep, 2018	Holding pen
B	09 Sep, 2018	Holding pen
C	09 Sep, 2018	Chopped
D	09 Sep, 2018	Chopped
E	09 Sep, 2018	Chopped
F	09 Sep, 2018	Chopped
G	09 Sep, 2018	Chopped
H	09 Sep, 2018	Chopped
I	09 Sep, 2018	Holding pen
J	09 Sep, 2018	Chopped
K	09 Sep, 2018	Chopped
L	09 Sep, 2018	Chopped
N	09 Sep, 2018	Rejected
P	09 Sep, 2018	Rejected
T	09 Sep, 2018	Rejected
U	09 Sep, 2018	Holding pen
V	09 Sep, 2018	Write scan list
W	09 Sep, 2018	Holding pen
X	09 Sep, 2018	Rejected
Y	09 Sep, 2018	Chopped
Z	09 Sep, 2018	Holding pen

CATH Domains (13)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
6gmlC01	10 Sep, 2018	3.30.1360.10	Assigned
6gmlC02	10 Sep, 2018	2.170.120.12	Assigned
6gmlD00	10 Sep, 2018	1.20.1250.40	Assigned
6gmlE01	10 Sep, 2018	3.40.1340.10	Assigned
6gmlE02	10 Sep, 2018	3.90.940.20	Assigned
6gmlF00	10 Sep, 2018	3.90.940.10	Assigned
6gmlG01	10 Sep, 2018	3.30.1490.120	Assigned
6gmlG02	10 Sep, 2018	2.40.50.140	Assigned
6gmlH01	10 Sep, 2018	2.40.50.140	Assigned
6gmlJ00	10 Sep, 2018	1.10.10.60	Assigned
6gmlK00	10 Sep, 2018	3.30.1360.10	Assigned
6gmlL00	10 Sep, 2018	2.20.28.30	Assigned
6gmlY01	10 Sep, 2018	3.30.40.210	Assigned

UniProtKB Entries (15)

Accession	Gene ID	Taxon	Description
I3LCH3	I3LCH3_PIG	Sus scrofa	DNA-directed RNA polymerase II subunit RPB3
A0A287B432	A0A287B432_PIG	Sus scrofa	Uncharacterized protein
I3LN51	I3LN51_PIG	Sus scrofa	Uncharacterized protein
I3LSI7	I3LSI7_PIG	Sus scrofa	Uncharacterized protein
A0A287ADR4	A0A287ADR4_PIG	Sus scrofa	DNA-directed RNA polymerase II subunit RPB4
P60899	RPB9_PIG	Sus scrofa	DNA-directed RNA polymerase II subunit RPB9
F1SKN8	F1SKN8_PIG	Sus scrofa	Uncharacterized protein
I3LJR4	I3LJR4_PIG	Sus scrofa	DNA-directed RNA polymerase subunit
F1RKE4	F1RKE4_PIG	Sus scrofa	DNA-directed RNA polymerase II subunit RPB11-a
P18615	NELFE_HUMAN	Homo sapiens	Negative elongation factor E
I3LCB2	I3LCB2_PIG	Sus scrofa	DNA-directed RNA polymerases I, II, and III subunit RPABC3
I3LGP4	I3LGP4_PIG	Sus scrofa	DNA-directed RNA polymerase subunit beta
P63272	SPT4H_HUMAN	Homo sapiens	Transcription elongation factor SPT4
O00267	SPT5H_HUMAN	Homo sapiens	Transcription elongation factor SPT5
I3LJZ9	I3LJZ9_PIG	Sus scrofa	Uncharacterized protein