PDB 6gmh

PDB Information

PDB6GMH
MethodELECTRON MICROSCOPY
Host OrganismTrichoplusia ni
Gene SourceHomo sapiens
Primary Citation
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6.
Vos, S.M., Farnung, L., Boehning, M., Wigge, C., Linden, A., Urlaub, H., Cramer, P.
Nature
HeaderTranscription
Released2018-05-26
Resolution3.100
CATH Insert Date26 Aug, 2018

PDB Images (38)

PDB Prints

PDB Chains (23)

Chain ID Date inserted into CATH CATH Status
A 26 Aug, 2018 Holding pen
B 26 Aug, 2018 Holding pen
C 26 Aug, 2018 Chopped
D 26 Aug, 2018 Chopped
E 26 Aug, 2018 Chopped
F 26 Aug, 2018 Chopped
G 26 Aug, 2018 Chopped
H 26 Aug, 2018 Chopped
I 26 Aug, 2018 Holding pen
J 26 Aug, 2018 Chopped
K 26 Aug, 2018 Chopped
L 26 Aug, 2018 Chopped
M 26 Aug, 2018 Write scan list
N 26 Aug, 2018 Rejected
P 26 Aug, 2018 Rejected
Q 26 Aug, 2018 Write scan list
T 26 Aug, 2018 Rejected
U 26 Aug, 2018 Write scan list
V 26 Aug, 2018 Write scan list
W 26 Aug, 2018 Chopped
X 26 Aug, 2018 Rejected
Y 26 Aug, 2018 Chopped
Z 26 Aug, 2018 Holding pen

CATH Domains (14)

Domain ID Date inserted into CATH Superfamily CATH Status
6gmhC01 27 Aug, 2018 3.30.1360.10 Assigned
6gmhC02 27 Aug, 2018 2.170.120.12 Assigned
6gmhD00 27 Aug, 2018 1.20.1250.40 Assigned
6gmhE01 27 Aug, 2018 3.40.1340.10 Assigned
6gmhE02 27 Aug, 2018 3.90.940.20 Assigned
6gmhF00 27 Aug, 2018 3.90.940.10 Assigned
6gmhG01 27 Aug, 2018 3.30.1490.120 Assigned
6gmhG02 27 Aug, 2018 2.40.50.140 Assigned
6gmhH01 27 Aug, 2018 2.40.50.140 Assigned
6gmhJ00 27 Aug, 2018 1.10.10.60 Assigned
6gmhK00 27 Aug, 2018 3.30.1360.10 Assigned
6gmhL00 27 Aug, 2018 2.20.28.30 Assigned
6gmhW00 27 Aug, 2018 2.130.10.10 Assigned
6gmhY01 27 Aug, 2018 3.30.40.210 Assigned

UniProtKB Entries (17)

Accession Gene ID Taxon Description
I3LGP4 I3LGP4_PIG Sus scrofa DNA-directed RNA polymerase subunit beta
Q7KZ85 SPT6H_HUMAN Homo sapiens Transcription elongation factor SPT6
I3LJZ9 I3LJZ9_PIG Sus scrofa Uncharacterized protein
I3LCB2 I3LCB2_PIG Sus scrofa DNA-directed RNA polymerases I, II, and III subunit RPABC3
A0A287ADR4 A0A287ADR4_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB4
P63272 SPT4H_HUMAN Homo sapiens Transcription elongation factor SPT4
I3LJR4 I3LJR4_PIG Sus scrofa DNA-directed RNA polymerase subunit
Q9GZS3 WDR61_HUMAN Homo sapiens WD repeat-containing protein 61
I3LN51 I3LN51_PIG Sus scrofa Uncharacterized protein
I3LSI7 I3LSI7_PIG Sus scrofa Uncharacterized protein
F1SKN8 F1SKN8_PIG Sus scrofa Uncharacterized protein
Q6PD62 CTR9_HUMAN Homo sapiens RNA polymerase-associated protein CTR9 homolog
P60899 RPB9_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB9
F1RKE4 F1RKE4_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB11-a
I3LCH3 I3LCH3_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB3
A0A287B432 A0A287B432_PIG Sus scrofa Uncharacterized protein
O00267 SPT5H_HUMAN Homo sapiens Transcription elongation factor SPT5