PDB 5y5s

PDB Links
Overview

PDB Information

PDB	5Y5S
Method	X-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation	Structure of photosynthetic LH1-RC supercomplex at 1.9 angstrom resolution. Yu, L.-J., Suga, M., Wang-Otomo, Z.-Y., Shen, J.R. Nature
Header	Photosynthesis
Released	2017-08-09
Resolution	1.900
CATH Insert Date	03 Jun, 2018

PDB Images (76)

5y5s

PDB 5y5s

5y5s0

PDB Chain 5y5s0

5y5s1

PDB Chain 5y5s1

5y5s2

PDB Chain 5y5s2

5y5s3

PDB Chain 5y5s3

5y5s4

PDB Chain 5y5s4

5y5s5

PDB Chain 5y5s5

5y5s6

PDB Chain 5y5s6

5y5s7

PDB Chain 5y5s7

5y5s8

PDB Chain 5y5s8

5y5s9

PDB Chain 5y5s9

5y5sA

PDB Chain 5y5sA

5y5sB

PDB Chain 5y5sB

5y5sC

PDB Chain 5y5sC

5y5sD

PDB Chain 5y5sD

5y5sE

PDB Chain 5y5sE

5y5sF

PDB Chain 5y5sF

5y5sG

PDB Chain 5y5sG

5y5sH

PDB Chain 5y5sH

5y5sI

PDB Chain 5y5sI

5y5sJ

PDB Chain 5y5sJ

5y5sK

PDB Chain 5y5sK

5y5sL

PDB Chain 5y5sL

5y5sM

PDB Chain 5y5sM

5y5sN

PDB Chain 5y5sN

5y5sO

PDB Chain 5y5sO

5y5sP

PDB Chain 5y5sP

5y5sQ

PDB Chain 5y5sQ

5y5sR

PDB Chain 5y5sR

5y5sS

PDB Chain 5y5sS

5y5sT

PDB Chain 5y5sT

5y5sU

PDB Chain 5y5sU

5y5sV

PDB Chain 5y5sV

5y5sW

PDB Chain 5y5sW

5y5sX

PDB Chain 5y5sX

5y5sY

PDB Chain 5y5sY

5y5sZ

PDB Chain 5y5sZ

5y5s000

CATH Domain 5y5s000

5y5s100

CATH Domain 5y5s100

5y5s200

CATH Domain 5y5s200

5y5s300

CATH Domain 5y5s300

5y5s400

CATH Domain 5y5s400

5y5s500

CATH Domain 5y5s500

5y5s600

CATH Domain 5y5s600

5y5s700

CATH Domain 5y5s700

5y5s800

CATH Domain 5y5s800

5y5s900

CATH Domain 5y5s900

5y5sA00

CATH Domain 5y5sA00

5y5sB00

CATH Domain 5y5sB00

5y5sC01

CATH Domain 5y5sC01

5y5sC02

CATH Domain 5y5sC02

5y5sD00

CATH Domain 5y5sD00

5y5sF00

CATH Domain 5y5sF00

5y5sG00

CATH Domain 5y5sG00

5y5sH01

CATH Domain 5y5sH01

5y5sH02

CATH Domain 5y5sH02

5y5sI00

CATH Domain 5y5sI00

5y5sJ00

CATH Domain 5y5sJ00

5y5sK00

CATH Domain 5y5sK00

5y5sL01

CATH Domain 5y5sL01

5y5sL02

CATH Domain 5y5sL02

5y5sM01

CATH Domain 5y5sM01

5y5sM02

CATH Domain 5y5sM02

5y5sN00

CATH Domain 5y5sN00

5y5sO00

CATH Domain 5y5sO00

5y5sP00

CATH Domain 5y5sP00

5y5sQ00

CATH Domain 5y5sQ00

5y5sR00

CATH Domain 5y5sR00

5y5sS00

CATH Domain 5y5sS00

5y5sT00

CATH Domain 5y5sT00

5y5sU00

CATH Domain 5y5sU00

5y5sV00

CATH Domain 5y5sV00

5y5sW00

CATH Domain 5y5sW00

5y5sX00

CATH Domain 5y5sX00

5y5sY00

CATH Domain 5y5sY00

5y5sZ00

CATH Domain 5y5sZ00

PDB Prints

PDB Chains (36)

Chain ID	Date inserted into CATH	CATH Status
0	03 Jun, 2018	Chopped
1	03 Jun, 2018	Chopped
2	03 Jun, 2018	Chopped
3	03 Jun, 2018	Chopped
4	03 Jun, 2018	Chopped
5	03 Jun, 2018	Chopped
6	03 Jun, 2018	Chopped
7	03 Jun, 2018	Chopped
8	03 Jun, 2018	Chopped
9	03 Jun, 2018	Chopped
A	03 Jun, 2018	Chopped
B	03 Jun, 2018	Chopped
C	03 Jun, 2018	Chopped
D	03 Jun, 2018	Chopped
E	03 Jun, 2018	Rejected
F	03 Jun, 2018	Chopped
G	03 Jun, 2018	Chopped
H	03 Jun, 2018	Chopped
I	03 Jun, 2018	Chopped
J	03 Jun, 2018	Chopped
K	03 Jun, 2018	Chopped
L	03 Jun, 2018	Chopped
M	03 Jun, 2018	Chopped
N	03 Jun, 2018	Chopped
O	03 Jun, 2018	Chopped
P	03 Jun, 2018	Chopped
Q	03 Jun, 2018	Chopped
R	03 Jun, 2018	Chopped
S	03 Jun, 2018	Chopped
T	03 Jun, 2018	Chopped
U	03 Jun, 2018	Chopped
V	03 Jun, 2018	Chopped
W	03 Jun, 2018	Chopped
X	03 Jun, 2018	Chopped
Y	03 Jun, 2018	Chopped
Z	03 Jun, 2018	Chopped

CATH Domains (39)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5y5s000	28 Jun, 2018	1.20.5.250	Assigned
5y5s100	28 Jun, 2018	4.10.220.20	Assigned
5y5s200	28 Jun, 2018	1.20.5.250	Assigned
5y5s300	28 Jun, 2018	4.10.220.20	Assigned
5y5s400	28 Jun, 2018	1.20.5.250	Assigned
5y5s500	28 Jun, 2018	4.10.220.20	Assigned
5y5s600	28 Jun, 2018	1.20.5.250	Assigned
5y5s700	28 Jun, 2018	4.10.220.20	Assigned
5y5s800	28 Jun, 2018	1.20.5.250	Assigned
5y5s900	28 Jun, 2018	4.10.220.20	Assigned
5y5sA00	28 Jun, 2018	4.10.220.20	Assigned
5y5sB00	28 Jun, 2018	1.20.5.250	Assigned
5y5sC01	28 Jun, 2018	1.10.468.10	Assigned
5y5sC02	28 Jun, 2018	1.10.468.10	Assigned
5y5sD00	28 Jun, 2018	4.10.220.20	Assigned
5y5sF00	28 Jun, 2018	4.10.220.20	Assigned
5y5sG00	28 Jun, 2018	1.20.5.250	Assigned
5y5sH01	28 Jun, 2018	4.10.540.10	Assigned
5y5sH02	28 Jun, 2018	3.90.50.10	Assigned
5y5sI00	28 Jun, 2018	4.10.220.20	Assigned
5y5sJ00	28 Jun, 2018	1.20.5.250	Assigned
5y5sK00	28 Jun, 2018	4.10.220.20	Assigned
5y5sL01	28 Jun, 2018	1.20.85.10	Assigned
5y5sL02	28 Jun, 2018	1.20.85.10	Assigned
5y5sM01	28 Jun, 2018	1.20.85.10	Assigned
5y5sM02	28 Jun, 2018	1.20.85.10	Assigned
5y5sN00	28 Jun, 2018	1.20.5.250	Assigned
5y5sO00	28 Jun, 2018	4.10.220.20	Assigned
5y5sP00	28 Jun, 2018	1.20.5.250	Assigned
5y5sQ00	28 Jun, 2018	4.10.220.20	Assigned
5y5sR00	28 Jun, 2018	1.20.5.250	Assigned
5y5sS00	28 Jun, 2018	4.10.220.20	Assigned
5y5sT00	28 Jun, 2018	1.20.5.250	Assigned
5y5sU00	28 Jun, 2018	4.10.220.20	Assigned
5y5sV00	28 Jun, 2018	1.20.5.250	Assigned
5y5sW00	28 Jun, 2018	4.10.220.20	Assigned
5y5sX00	28 Jun, 2018	1.20.5.250	Assigned
5y5sY00	28 Jun, 2018	4.10.220.20	Assigned
5y5sZ00	28 Jun, 2018	1.20.5.250	Assigned

UniProtKB Entries (36)

Accession	Gene ID	Taxon	Description
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
A8ASG6	A8ASG6_THETI	Thermochromatium tepidum	Reaction center protein M chain
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P9	D2Z0P9_THETI	Thermochromatium tepidum	Photosynthetic reaction center H subunit
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P3	D2Z0P3_THETI	Thermochromatium tepidum	Photosynthetic reaction center L subunit
D2Z0P5	CYCR_THETI	Thermochromatium tepidum	Photosynthetic reaction center cytochrome c subunit
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P2	D2Z0P2_THETI	Thermochromatium tepidum	LH1 alpha polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide
D2Z0P1	D2Z0P1_THETI	Thermochromatium tepidum	LH1 beta polypeptide