PDB 5wsg
PDB Information
| PDB | 5WSG |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Structure of a yeast step II catalytically activated spliceosome
Science
|
| Header | Rna Binding Protein/Rna |
| Released | 2016-12-07 |
| Resolution | 4.000 |
| CATH Insert Date | 07 May, 2017 |
PDB Images (66)
5wsg
PDB 5wsg
5wsgA
PDB Chain 5wsgA
5wsgb
PDB Chain 5wsgb
5wsgB
PDB Chain 5wsgB
5wsgc
PDB Chain 5wsgc
5wsgC
PDB Chain 5wsgC
5wsgd
PDB Chain 5wsgd
5wsgD
PDB Chain 5wsgD
5wsge
PDB Chain 5wsge
5wsgE
PDB Chain 5wsgE
5wsgf
PDB Chain 5wsgf
5wsgF
PDB Chain 5wsgF
5wsgg
PDB Chain 5wsgg
5wsgG
PDB Chain 5wsgG
5wsgh
PDB Chain 5wsgh
5wsgH
PDB Chain 5wsgH
5wsgi
PDB Chain 5wsgi
5wsgI
PDB Chain 5wsgI
5wsgj
PDB Chain 5wsgj
5wsgJ
PDB Chain 5wsgJ
5wsgk
PDB Chain 5wsgk
5wsgK
PDB Chain 5wsgK
5wsgl
PDB Chain 5wsgl
5wsgL
PDB Chain 5wsgL
5wsgm
PDB Chain 5wsgm
5wsgM
PDB Chain 5wsgM
5wsgn
PDB Chain 5wsgn
5wsgN
PDB Chain 5wsgN
5wsgo
PDB Chain 5wsgo
5wsgO
PDB Chain 5wsgO
5wsgp
PDB Chain 5wsgp
5wsgP
PDB Chain 5wsgP
5wsgq
PDB Chain 5wsgq
5wsgQ
PDB Chain 5wsgQ
5wsgr
PDB Chain 5wsgr
5wsgR
PDB Chain 5wsgR
5wsgS
PDB Chain 5wsgS
5wsgt
PDB Chain 5wsgt
5wsgT
PDB Chain 5wsgT
5wsgU
PDB Chain 5wsgU
5wsgv
PDB Chain 5wsgv
5wsgV
PDB Chain 5wsgV
5wsgW
PDB Chain 5wsgW
5wsgX
PDB Chain 5wsgX
5wsgY
PDB Chain 5wsgY
5wsgZ
PDB Chain 5wsgZ
5wsgf00
CATH Domain 5wsgf00
5wsgF00
CATH Domain 5wsgF00
5wsgg00
CATH Domain 5wsgg00
5wsgG00
CATH Domain 5wsgG00
5wsgh00
CATH Domain 5wsgh00
5wsgH00
CATH Domain 5wsgH00
5wsgi00
CATH Domain 5wsgi00
5wsgI00
CATH Domain 5wsgI00
5wsgj00
CATH Domain 5wsgj00
5wsgk00
CATH Domain 5wsgk00
5wsgK00
CATH Domain 5wsgK00
5wsgl00
CATH Domain 5wsgl00
5wsgm00
CATH Domain 5wsgm00
5wsgn00
CATH Domain 5wsgn00
5wsgO00
CATH Domain 5wsgO00
5wsgU00
CATH Domain 5wsgU00
5wsgV00
CATH Domain 5wsgV00
5wsgW00
CATH Domain 5wsgW00
5wsgX00
CATH Domain 5wsgX00
5wsgY00
CATH Domain 5wsgY00
PDB Prints
PDB Chains (45)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 08 May, 2017 | Holding pen |
| b | 08 May, 2017 | Rejected |
| B | 08 May, 2017 | Rejected |
| c | 08 May, 2017 | Holding pen |
| C | 08 May, 2017 | Holding pen |
| d | 08 May, 2017 | Holding pen |
| D | 08 May, 2017 | Rejected |
| e | 08 May, 2017 | Holding pen |
| E | 08 May, 2017 | Rejected |
| f | 08 May, 2017 | Chopped |
| F | 08 May, 2017 | Chopped |
| g | 08 May, 2017 | Chopped |
| G | 08 May, 2017 | Chopped |
| h | 08 May, 2017 | Chopped |
| H | 08 May, 2017 | Chopped |
| i | 08 May, 2017 | Chopped |
| I | 08 May, 2017 | Chopped |
| j | 08 May, 2017 | Chopped |
| J | 08 May, 2017 | Rejected |
| k | 08 May, 2017 | Chopped |
| K | 08 May, 2017 | Chopped |
| l | 08 May, 2017 | Chopped |
| L | 08 May, 2017 | Rejected |
| m | 08 May, 2017 | Chopped |
| M | 08 May, 2017 | Rejected |
| n | 08 May, 2017 | Chopped |
| N | 08 May, 2017 | Rejected |
| o | 08 May, 2017 | Holding pen |
| O | 08 May, 2017 | Chopped |
| p | 08 May, 2017 | Holding pen |
| P | 08 May, 2017 | Holding pen |
| q | 08 May, 2017 | Holding pen |
| Q | 08 May, 2017 | Holding pen |
| r | 08 May, 2017 | Holding pen |
| R | 08 May, 2017 | Holding pen |
| S | 08 May, 2017 | Holding pen |
| t | 08 May, 2017 | Holding pen |
| T | 08 May, 2017 | Holding pen |
| U | 08 May, 2017 | Chopped |
| v | 08 May, 2017 | Domchop review |
| V | 08 May, 2017 | Chopped |
| W | 08 May, 2017 | Chopped |
| X | 08 May, 2017 | Chopped |
| Y | 08 May, 2017 | Chopped |
| Z | 08 May, 2017 | Holding pen |
CATH Domains (20)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5wsgf00 | 26 May, 2017 | 1.20.940.10 | Assigned |
| 5wsgF00 | 26 May, 2017 | Holding pen | |
| 5wsgg00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgG00 | 27 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgh00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgH00 | 27 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgi00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgI00 | 26 May, 2017 | Holding pen | |
| 5wsgj00 | 27 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgk00 | 27 May, 2017 | Holding pen | |
| 5wsgK00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgl00 | 27 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgm00 | 27 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgn00 | 22 Feb, 2018 | Holding pen | |
| 5wsgO00 | 14 Dec, 2017 | 2.130.10.10 | Assigned |
| 5wsgU00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgV00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgW00 | 26 May, 2017 | 2.30.30.100 | Assigned |
| 5wsgX00 | 26 May, 2017 | 3.30.70.330 | Assigned |
| 5wsgY00 | 26 May, 2017 | Holding pen |
UniProtKB Entries (32)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P53333 | CWC22_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC22 |
| Q02260 | SMD1_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D1 |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| P15938 | PRP16_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 |
| Q06217 | SMD2_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D2 |
| Q12330 | RUXE_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein E |
| P40018 | RSMB_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein-associated protein B |
| P40204 | RUXG_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein G |
| Q08963 | RU2A_YEAST | Saccharomyces cerevisiae S288C | U2 small nuclear ribonucleoprotein A' |
| Q12309 | CLF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CLF1 |
| Q03654 | CEF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CEF1 |
| P43321 | SMD3_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D3 |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| P33411 | PRP18_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 18 |
| Q12046 | CWC2_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC2 |
| P54999 | RUXF_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein F |
| Q02260 | SMD1_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D1 |
| Q06217 | SMD2_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D2 |
| P43321 | SMD3_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D3 |
| P54999 | RUXF_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein F |
| P40567 | MSL1_YEAST | Saccharomyces cerevisiae S288C | U2 small nuclear ribonucleoprotein B'' |
| P36048 | SN114_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor SNU114 |
| P40018 | RSMB_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein-associated protein B |
| P40204 | RUXG_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein G |
| Q12330 | RUXE_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein E |
| Q03375 | CWC21_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC21 |
| Q12417 | PRP46_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor PRP46 |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| P40968 | PRP17_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 17 |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| Q04048 | SYF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor SYF1 |
| P33334 | PRP8_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 8 |
