PDB 5sva

PDB Links
Overview

PDB Information

PDB	5SVA
Method	ELECTRON MICROSCOPY
Host Organism	Escherichia coli
Gene Source	Saccharomyces cerevisiae
Primary Citation	Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex. Robinson, P.J., Trnka, M.J., Bushnell, D.A., Davis, R.E., Mattei, P.J., Burlingame, A.L., Kornberg, R.D. Cell
Header	Transcription, Transferase/Dna
Released	2016-08-05
Resolution	15.300
CATH Insert Date	16 Oct, 2016

PDB Images (41)

5sva

PDB 5sva

5svaa

PDB Chain 5svaa

5svaA

PDB Chain 5svaA

5svab

PDB Chain 5svab

5svaB

PDB Chain 5svaB

5svac

PDB Chain 5svac

5svaC

PDB Chain 5svaC

5svad

PDB Chain 5svad

5svaD

PDB Chain 5svaD

5svae

PDB Chain 5svae

5svaE

PDB Chain 5svaE

5svaf

PDB Chain 5svaf

5svaF

PDB Chain 5svaF

5svag

PDB Chain 5svag

5svaG

PDB Chain 5svaG

5svah

PDB Chain 5svah

5svaH

PDB Chain 5svaH

5svai

PDB Chain 5svai

5svaI

PDB Chain 5svaI

5svaj

PDB Chain 5svaj

5svaJ

PDB Chain 5svaJ

5svak

PDB Chain 5svak

5svaK

PDB Chain 5svaK

5sval

PDB Chain 5sval

5svaL

PDB Chain 5svaL

5svam

PDB Chain 5svam

5svaM

PDB Chain 5svaM

5svan

PDB Chain 5svan

5svaN

PDB Chain 5svaN

5svaO

PDB Chain 5svaO

5svaP

PDB Chain 5svaP

5svaQ

PDB Chain 5svaQ

5svaR

PDB Chain 5svaR

5svaS

PDB Chain 5svaS

5svaT

PDB Chain 5svaT

5svaU

PDB Chain 5svaU

5svaV

PDB Chain 5svaV

5svaW

PDB Chain 5svaW

5svaX

PDB Chain 5svaX

5svaY

PDB Chain 5svaY

5svaZ

PDB Chain 5svaZ

PDB Prints

PDB Chains (40)

Chain ID	Date inserted into CATH	CATH Status
a	17 Oct, 2016	Rejected
A	17 Oct, 2016	Rejected
b	17 Oct, 2016	Rejected
B	17 Oct, 2016	Rejected
c	17 Oct, 2016	Rejected
C	17 Oct, 2016	Rejected
d	17 Oct, 2016	Rejected
D	17 Oct, 2016	Rejected
e	17 Oct, 2016	Rejected
E	17 Oct, 2016	Rejected
f	17 Oct, 2016	Rejected
F	17 Oct, 2016	Rejected
g	17 Oct, 2016	Rejected
G	17 Oct, 2016	Rejected
h	17 Oct, 2016	Rejected
H	17 Oct, 2016	Rejected
i	17 Oct, 2016	Rejected
I	17 Oct, 2016	Rejected
j	17 Oct, 2016	Rejected
J	17 Oct, 2016	Rejected
k	17 Oct, 2016	Rejected
K	17 Oct, 2016	Rejected
l	17 Oct, 2016	Rejected
L	17 Oct, 2016	Rejected
m	17 Oct, 2016	Rejected
M	17 Oct, 2016	Rejected
n	17 Oct, 2016	Rejected
N	17 Oct, 2016	Rejected
O	17 Oct, 2016	Rejected
P	17 Oct, 2016	Rejected
Q	17 Oct, 2016	Rejected
R	17 Oct, 2016	Rejected
S	17 Oct, 2016	Rejected
T	17 Oct, 2016	Rejected
U	17 Oct, 2016	Rejected
V	17 Oct, 2016	Rejected
W	17 Oct, 2016	Rejected
X	17 Oct, 2016	Rejected
Y	17 Oct, 2016	Rejected
Z	17 Oct, 2016	Rejected

CATH Domains (0)

Domain ID	Date inserted into CATH	Superfamily	CATH Status

UniProtKB Entries (34)

Accession	Gene ID	Taxon	Description
P40422	RPAB4_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerases I, II, and III subunit RPABC4
Q08278	MED7_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 7
Q3E7C1	TFB5_YEAST	Saccharomyces cerevisiae S288C	General transcription and DNA repair factor IIH subunit TFB5
P04050	RPB1_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB1
P32569	MED17_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 17
P38902	RPB11_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB11
P38782	MED6_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 6
P20433	RPB4_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB4
P32585	MED18_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 18
P27999	RPB9_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB9
P20436	RPAB3_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerases I, II, and III subunit RPABC3
P32773	TOA1_YEAST	Saccharomyces cerevisiae S288C	Transcription initiation factor IIA large subunit
P20435	RPAB2_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerases I, II, and III subunit RPABC2
P41896	T2FB_YEAST	Saccharomyces cerevisiae S288C	Transcription initiation factor IIF subunit beta
P35189	TAF14_YEAST	Saccharomyces cerevisiae S288C	Transcription initiation factor TFIID subunit 14
P34162	MED20_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 20
P47822	MED21_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 21
P13393	TBP_YEAST	Saccharomyces cerevisiae S288C	TATA-box-binding protein
P08518	RPB2_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB2
P32570	MED22_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 22
P34087	RPB7_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB7
P38304	MED8_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 8
Q99278	MED11_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 11
P29055	TF2B_YEAST	Saccharomyces cerevisiae S288C	Transcription initiation factor IIB
P32774	T2AG_YEAST	Saccharomyces cerevisiae S288C	Transcription initiation factor IIA subunit 2
Q00578	RAD25_YEAST	Saccharomyces cerevisiae S288C	General transcription and DNA repair factor IIH helicase subunit XPB
P22139	RPAB5_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerases I, II, and III subunit RPABC5
P04050	RPB1_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB1
P36100	T2EA_YEAST	Saccharomyces cerevisiae S288C	Transcription initiation factor IIE subunit alpha
P38633	MED31_YEAST	Saccharomyces cerevisiae S288C	Mediator of RNA polymerase II transcription subunit 31
P20434	RPAB1_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerases I, II, and III subunit RPABC1
P06839	RAD3_YEAST	Saccharomyces cerevisiae S288C	General transcription and DNA repair factor IIH helicase subunit XPD
Q02939	TFB2_YEAST	Saccharomyces cerevisiae S288C	General transcription and DNA repair factor IIH subunit TFB2
P16370	RPB3_YEAST	Saccharomyces cerevisiae S288C	DNA-directed RNA polymerase II subunit RPB3