PDB 5oom

PDB Links
Overview

PDB Information

PDB	5OOM
Method	ELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation	Structures of the human mitochondrial ribosome in native states of assembly. Brown, A., Rathore, S., Kimanius, D., Aibara, S., Bai, X.C., Rorbach, J., Amunts, A., Ramakrishnan, V. Nat. Struct. Mol. Biol.
Header	Ribosome
Released	2017-08-08
Resolution	3.030
CATH Insert Date	14 Nov, 2017

PDB Images (79)

5oom

PDB 5oom

5oom0

PDB Chain 5oom0

5oom1

PDB Chain 5oom1

5oom2

PDB Chain 5oom2

5oom3

PDB Chain 5oom3

5oom5

PDB Chain 5oom5

5oom6

PDB Chain 5oom6

5oom7

PDB Chain 5oom7

5oom8

PDB Chain 5oom8

5oom9

PDB Chain 5oom9

5ooma

PDB Chain 5ooma

5oomA

PDB Chain 5oomA

5oomb

PDB Chain 5oomb

5oomB

PDB Chain 5oomB

5oomc

PDB Chain 5oomc

5oomd

PDB Chain 5oomd

5oomD

PDB Chain 5oomD

5oome

PDB Chain 5oome

5oomE

PDB Chain 5oomE

5oomf

PDB Chain 5oomf

5oomF

PDB Chain 5oomF

5oomg

PDB Chain 5oomg

5oomh

PDB Chain 5oomh

5oomH

PDB Chain 5oomH

5oomi

PDB Chain 5oomi

5oomI

PDB Chain 5oomI

5oomj

PDB Chain 5oomj

5oomJ

PDB Chain 5oomJ

5oomk

PDB Chain 5oomk

5oomK

PDB Chain 5oomK

5ooml

PDB Chain 5ooml

5oomL

PDB Chain 5oomL

5oomm

PDB Chain 5oomm

5oomM

PDB Chain 5oomM

5oomN

PDB Chain 5oomN

5oomo

PDB Chain 5oomo

5oomO

PDB Chain 5oomO

5oomp

PDB Chain 5oomp

5oomP

PDB Chain 5oomP

5oomq

PDB Chain 5oomq

5oomQ

PDB Chain 5oomQ

5oomr

PDB Chain 5oomr

5oomR

PDB Chain 5oomR

5ooms

PDB Chain 5ooms

5oomS

PDB Chain 5oomS

5oomt

PDB Chain 5oomt

5oomT

PDB Chain 5oomT

5oomu

PDB Chain 5oomu

5oomU

PDB Chain 5oomU

5oomv

PDB Chain 5oomv

5oomV

PDB Chain 5oomV

5oomw

PDB Chain 5oomw

5oomW

PDB Chain 5oomW

5oomX

PDB Chain 5oomX

5oomY

PDB Chain 5oomY

5oomZ

PDB Chain 5oomZ

5oom100

CATH Domain 5oom100

5oom200

CATH Domain 5oom200

5oom501

CATH Domain 5oom501

5oom800

CATH Domain 5oom800

5oomb00

CATH Domain 5oomb00

5oomF00

CATH Domain 5oomF00

5oomg00

CATH Domain 5oomg00

5oomI00

CATH Domain 5oomI00

5oomJ01

CATH Domain 5oomJ01

5oomJ02

CATH Domain 5oomJ02

5oomk00

CATH Domain 5oomk00

5oomK00

CATH Domain 5oomK00

5oomL00

CATH Domain 5oomL00

5oomm00

CATH Domain 5oomm00

5oomP00

CATH Domain 5oomP00

5oomq00

CATH Domain 5oomq00

5ooms01

CATH Domain 5ooms01

5oomT00

CATH Domain 5oomT00

5oomu00

CATH Domain 5oomu00

5oomU00

CATH Domain 5oomU00

5oomv00

CATH Domain 5oomv00

5oomw00

CATH Domain 5oomw00

5oomW00

CATH Domain 5oomW00

PDB Prints

PDB Chains (55)

Chain ID	Date inserted into CATH	CATH Status
0	14 Nov, 2017	Holding pen
1	14 Nov, 2017	Chopped
2	14 Nov, 2017	Chopped
3	14 Nov, 2017	Holding pen
5	14 Nov, 2017	Chopped
6	14 Nov, 2017	Holding pen
7	14 Nov, 2017	Holding pen
8	14 Nov, 2017	Chopped
9	14 Nov, 2017	Holding pen
a	14 Nov, 2017	Holding pen
A	14 Nov, 2017	Rejected
b	14 Nov, 2017	Chopped
B	14 Nov, 2017	Rejected
c	14 Nov, 2017	Holding pen
d	14 Nov, 2017	Holding pen
D	14 Nov, 2017	Write scan list
e	14 Nov, 2017	Holding pen
E	14 Nov, 2017	Holding pen
f	14 Nov, 2017	Holding pen
F	14 Nov, 2017	Chopped
g	14 Nov, 2017	Chopped
h	14 Nov, 2017	Holding pen
H	14 Nov, 2017	Holding pen
i	14 Nov, 2017	Holding pen
I	14 Nov, 2017	Chopped
j	14 Nov, 2017	Holding pen
J	14 Nov, 2017	Chopped
k	14 Nov, 2017	Chopped
K	14 Nov, 2017	Chopped
l	14 Nov, 2017	Rejected
L	14 Nov, 2017	Chopped
m	14 Nov, 2017	Chopped
M	14 Nov, 2017	Holding pen
N	14 Nov, 2017	Holding pen
o	14 Nov, 2017	Holding pen
O	14 Nov, 2017	Holding pen
p	14 Nov, 2017	Holding pen
P	14 Nov, 2017	Chopped
q	14 Nov, 2017	Chopped
Q	14 Nov, 2017	Holding pen
r	14 Nov, 2017	Holding pen
R	14 Nov, 2017	Holding pen
s	14 Nov, 2017	Chopped
S	14 Nov, 2017	Holding pen
t	14 Nov, 2017	Rejected
T	14 Nov, 2017	Chopped
u	14 Nov, 2017	Chopped
U	14 Nov, 2017	Chopped
v	14 Nov, 2017	Chopped
V	14 Nov, 2017	Holding pen
w	14 Nov, 2017	Chopped
W	14 Nov, 2017	Chopped
X	14 Nov, 2017	Holding pen
Y	14 Nov, 2017	Holding pen
Z	14 Nov, 2017	Holding pen

CATH Domains (23)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5oom100	10 Dec, 2017	2.20.28.120	Assigned
5oom200	10 Dec, 2017	1.10.287.3980	Assigned
5oom501	10 Dec, 2017		Holding pen
5oom800	10 Dec, 2017	6.10.250.3440	Assigned
5oomb00	10 Dec, 2017	3.40.30.10	Assigned
5oomF00	10 Dec, 2017	3.40.1370.10	Assigned
5oomg00	10 Dec, 2017	3.30.780.10	Assigned
5oomI00	10 Dec, 2017	3.30.70.1730	Assigned
5oomJ01	25 Jan, 2018	3.30.1550.10	Assigned
5oomJ02	25 Jan, 2018	1.10.10.250	Assigned
5oomk00	10 Dec, 2017	3.40.30.10	Assigned
5oomK00	10 Dec, 2017	3.90.1180.10	Assigned
5oomL00	10 Dec, 2017	2.40.150.20	Assigned
5oomm00	10 Dec, 2017	6.20.130.20	Assigned
5oomP00	10 Dec, 2017	3.30.420.80	Assigned
5oomq00	10 Dec, 2017	6.10.280.120	Assigned
5ooms01	10 Dec, 2017		Holding pen
5oomT00	10 Dec, 2017	3.90.470.10	Assigned
5oomu00	10 Dec, 2017		Holding pen
5oomU00	10 Dec, 2017	3.30.70.330	Assigned
5oomv00	16 Dec, 2017		Holding pen
5oomw00	10 Dec, 2017		Holding pen
5oomW00	10 Dec, 2017	2.40.50.100	Assigned

UniProtKB Entries (38)

Accession	Gene ID	Taxon	Description
Q5T653	RM02_HUMAN	Homo sapiens	39S ribosomal protein L2, mitochondrial
Q96EH3	MASU1_HUMAN	Homo sapiens	Mitochondrial assembly of ribosomal large subunit protein 1
Q7Z7F7	RM55_HUMAN	Homo sapiens	39S ribosomal protein L55, mitochondrial
Q9Y3B7	RM11_HUMAN	Homo sapiens	39S ribosomal protein L11, mitochondrial
Q9NX20	RM16_HUMAN	Homo sapiens	39S ribosomal protein L16, mitochondrial
Q9NYK5	RM39_HUMAN	Homo sapiens	39S ribosomal protein L39, mitochondrial
Q9H2W6	RM46_HUMAN	Homo sapiens	39S ribosomal protein L46, mitochondrial
Q8TAE8	G45IP_HUMAN	Homo sapiens	Growth arrest and DNA damage-inducible proteins-interacting protein 1
P09001	RM03_HUMAN	Homo sapiens	39S ribosomal protein L3, mitochondrial
Q9NQ50	RM40_HUMAN	Homo sapiens	39S ribosomal protein L40, mitochondrial
Q6P1L8	RM14_HUMAN	Homo sapiens	39S ribosomal protein L14, mitochondrial
Q9P015	RM15_HUMAN	Homo sapiens	39S ribosomal protein L15, mitochondrial
Q9HD33	RM47_HUMAN	Homo sapiens	39S ribosomal protein L47, mitochondrial
Q9P0M9	RM27_HUMAN	Homo sapiens	39S ribosomal protein L27, mitochondrial
O14561	ACPM_HUMAN	Homo sapiens	Acyl carrier protein, mitochondrial
P49406	RM19_HUMAN	Homo sapiens	39S ribosomal protein L19, mitochondrial
Q9NRX2	RM17_HUMAN	Homo sapiens	39S ribosomal protein L17, mitochondrial
O75394	RM33_HUMAN	Homo sapiens	39S ribosomal protein L33, mitochondrial
Q7Z7H8	RM10_HUMAN	Homo sapiens	39S ribosomal protein L10, mitochondrial
Q8N983	RM43_HUMAN	Homo sapiens	39S ribosomal protein L43, mitochondrial
Q96DV4	RM38_HUMAN	Homo sapiens	39S ribosomal protein L38, mitochondrial
Q96A35	RM24_HUMAN	Homo sapiens	39S ribosomal protein L24, mitochondrial
Q13405	RM49_HUMAN	Homo sapiens	39S ribosomal protein L49, mitochondrial
Q9BYD3	RM04_HUMAN	Homo sapiens	39S ribosomal protein L4, mitochondrial
Q9NWU5	RM22_HUMAN	Homo sapiens	39S ribosomal protein L22, mitochondrial
Q96EL3	RM53_HUMAN	Homo sapiens	39S ribosomal protein L53, mitochondrial
Q9H9J2	RM44_HUMAN	Homo sapiens	39S ribosomal protein L44, mitochondrial
Q9BYD2	RM09_HUMAN	Homo sapiens	39S ribosomal protein L9, mitochondrial
Q9BRJ2	RM45_HUMAN	Homo sapiens	39S ribosomal protein L45, mitochondrial
Q8TCC3	RM30_HUMAN	Homo sapiens	39S ribosomal protein L30, mitochondrial
Q14197	ICT1_HUMAN	Homo sapiens	Peptidyl-tRNA hydrolase ICT1, mitochondrial
Q9NVS2	RT18A_HUMAN	Homo sapiens	39S ribosomal protein S18a, mitochondrial
Q96GC5	RM48_HUMAN	Homo sapiens	39S ribosomal protein L48, mitochondrial
Q9BYD1	RM13_HUMAN	Homo sapiens	39S ribosomal protein L13, mitochondrial
Q9H0U6	RM18_HUMAN	Homo sapiens	39S ribosomal protein L18, mitochondrial
Q16540	RM23_HUMAN	Homo sapiens	39S ribosomal protein L23, mitochondrial
Q9BQ48	RM34_HUMAN	Homo sapiens	39S ribosomal protein L34, mitochondrial
Q9BYC9	RM20_HUMAN	Homo sapiens	39S ribosomal protein L20, mitochondrial