PDB 5nif

PDB Information

PDB5NIF
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Crystal structure of a low molecular weight activator Blm-pep with yeast 20S proteasome - insights into the enzyme activation mechanism.
Witkowska, J., Gizynska, M., Grudnik, P., Golik, P., Karpowicz, P., Giedon, A., Dubin, G., Jankowska, E.
Sci Rep
HeaderHydrolase
Released2017-03-23
Resolution3.000
CATH Insert Date14 Nov, 2017

PDB Images (59)

PDB Prints

PDB Chains (30)

Chain ID Date inserted into CATH CATH Status
1 14 Nov, 2017 Chopped
2 14 Nov, 2017 Chopped
3 14 Nov, 2017 Rejected
4 14 Nov, 2017 Rejected
A 14 Nov, 2017 Chopped
B 14 Nov, 2017 Chopped
C 14 Nov, 2017 Chopped
D 14 Nov, 2017 Chopped
E 14 Nov, 2017 Chopped
F 14 Nov, 2017 Chopped
G 14 Nov, 2017 Chopped
H 14 Nov, 2017 Chopped
I 14 Nov, 2017 Chopped
J 14 Nov, 2017 Chopped
K 14 Nov, 2017 Chopped
L 14 Nov, 2017 Chopped
M 14 Nov, 2017 Chopped
N 14 Nov, 2017 Chopped
O 14 Nov, 2017 Chopped
P 14 Nov, 2017 Chopped
Q 14 Nov, 2017 Chopped
R 14 Nov, 2017 Chopped
S 14 Nov, 2017 Chopped
T 14 Nov, 2017 Chopped
U 14 Nov, 2017 Chopped
V 14 Nov, 2017 Chopped
W 14 Nov, 2017 Chopped
X 14 Nov, 2017 Chopped
Y 14 Nov, 2017 Chopped
Z 14 Nov, 2017 Chopped

CATH Domains (28)

Domain ID Date inserted into CATH Superfamily CATH Status
5nif100 10 Dec, 2017 3.60.20.10 Assigned
5nif200 10 Dec, 2017 3.60.20.10 Assigned
5nifA00 10 Dec, 2017 3.60.20.10 Assigned
5nifB00 10 Dec, 2017 3.60.20.10 Assigned
5nifC00 10 Dec, 2017 3.60.20.10 Assigned
5nifD00 10 Dec, 2017 3.60.20.10 Assigned
5nifE00 10 Dec, 2017 3.60.20.10 Assigned
5nifF00 10 Dec, 2017 3.60.20.10 Assigned
5nifG00 10 Dec, 2017 3.60.20.10 Assigned
5nifH00 10 Dec, 2017 3.60.20.10 Assigned
5nifI00 10 Dec, 2017 3.60.20.10 Assigned
5nifJ00 10 Dec, 2017 3.60.20.10 Assigned
5nifK00 10 Dec, 2017 3.60.20.10 Assigned
5nifL00 10 Dec, 2017 3.60.20.10 Assigned
5nifM00 10 Dec, 2017 3.60.20.10 Assigned
5nifN00 10 Dec, 2017 3.60.20.10 Assigned
5nifO00 10 Dec, 2017 3.60.20.10 Assigned
5nifP00 10 Dec, 2017 3.60.20.10 Assigned
5nifQ00 10 Dec, 2017 3.60.20.10 Assigned
5nifR00 10 Dec, 2017 3.60.20.10 Assigned
5nifS00 10 Dec, 2017 3.60.20.10 Assigned
5nifT00 10 Dec, 2017 3.60.20.10 Assigned
5nifU00 10 Dec, 2017 3.60.20.10 Assigned
5nifV00 10 Dec, 2017 3.60.20.10 Assigned
5nifW00 10 Dec, 2017 3.60.20.10 Assigned
5nifX00 10 Dec, 2017 3.60.20.10 Assigned
5nifY00 10 Dec, 2017 3.60.20.10 Assigned
5nifZ00 10 Dec, 2017 3.60.20.10 Assigned

UniProtKB Entries (28)

Accession Gene ID Taxon Description
P25043 PSB2_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-2
P40302 PSA6_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-6
P40302 PSA6_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-6
P23724 PSB6_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-6
P21243 PSA1_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-1
P22141 PSB4_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-4
P38624 PSB1_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-1
P30656 PSB5_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-5
P23639 PSA2_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-2
P32379 PSA5_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-5
P40303 PSA4_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-4
P23638 PSA3_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-3
P23638 PSA3_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-3
P25451 PSB3_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-3
P23724 PSB6_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-6
P21242 PSA7_YEAST Saccharomyces cerevisiae S288C Probable proteasome subunit alpha type-7
P32379 PSA5_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-5
P30656 PSB5_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-5
P23639 PSA2_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-2
P40303 PSA4_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-4
P25043 PSB2_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-2
P25451 PSB3_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-3
P22141 PSB4_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-4
P30657 PSB7_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-7
P21242 PSA7_YEAST Saccharomyces cerevisiae S288C Probable proteasome subunit alpha type-7
P21243 PSA1_YEAST Saccharomyces cerevisiae S288C Proteasome subunit alpha type-1
P30657 PSB7_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-7
P38624 PSB1_YEAST Saccharomyces cerevisiae S288C Proteasome subunit beta type-1