# STOCKHOLM 1.0
#=GF ID 4.10.860.120/FF/000014
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 4.10.860.120/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.500
#=GS P91875/12-130      AC P91875
#=GS P91875/12-130      OS Drosophila melanogaster
#=GS P91875/12-130      DE DNA-directed RNA polymerase I subunit RPA1
#=GS P91875/12-130      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS P91875/12-130      DR EC; 2.7.7.6; 
#=GS E9GY13/8-133       AC E9GY13
#=GS E9GY13/8-133       OS Daphnia pulex
#=GS E9GY13/8-133       DE DNA-directed RNA polymerase subunit
#=GS E9GY13/8-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS D2A5Z9/10-134      AC D2A5Z9
#=GS D2A5Z9/10-134      OS Tribolium castaneum
#=GS D2A5Z9/10-134      DE DNA-directed RNA polymerase subunit
#=GS D2A5Z9/10-134      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS B3MEH6/11-132      AC B3MEH6
#=GS B3MEH6/11-132      OS Drosophila ananassae
#=GS B3MEH6/11-132      DE DNA-directed RNA polymerase subunit
#=GS B3MEH6/11-132      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4GAV6/13-130      AC B4GAV6
#=GS B4GAV6/13-130      OS Drosophila persimilis
#=GS B4GAV6/13-130      DE DNA-directed RNA polymerase subunit
#=GS B4GAV6/13-130      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B4QFV8/12-131      AC B4QFV8
#=GS B4QFV8/12-131      OS Drosophila simulans
#=GS B4QFV8/12-131      DE DNA-directed RNA polymerase subunit
#=GS B4QFV8/12-131      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A1W4U614/11-130  AC A0A1W4U614
#=GS A0A1W4U614/11-130  OS Drosophila ficusphila
#=GS A0A1W4U614/11-130  DE DNA-directed RNA polymerase subunit
#=GS A0A1W4U614/11-130  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS Q291D4/13-130      AC Q291D4
#=GS Q291D4/13-130      OS Drosophila pseudoobscura pseudoobscura
#=GS Q291D4/13-130      DE DNA-directed RNA polymerase subunit
#=GS Q291D4/13-130      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4HRE8/12-131      AC B4HRE8
#=GS B4HRE8/12-131      OS Drosophila sechellia
#=GS B4HRE8/12-131      DE DNA-directed RNA polymerase subunit
#=GS B4HRE8/12-131      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3NR27/12-130      AC B3NR27
#=GS B3NR27/12-130      OS Drosophila erecta
#=GS B3NR27/12-130      DE DNA-directed RNA polymerase subunit
#=GS B3NR27/12-130      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0J9RCM4/12-131  AC A0A0J9RCM4
#=GS A0A0J9RCM4/12-131  OS Drosophila simulans
#=GS A0A0J9RCM4/12-131  DE DNA-directed RNA polymerase subunit
#=GS A0A0J9RCM4/12-131  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4P775/12-130      AC B4P775
#=GS B4P775/12-130      OS Drosophila yakuba
#=GS B4P775/12-130      DE DNA-directed RNA polymerase subunit
#=GS B4P775/12-130      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 12
P91875/12-130              ------FPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCLK-LQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHECEIIMLQLRLIDA----
E9GY13/8-133               ----HYYPESVTFGFHTAHDITKISVVEVTQTDTFNALGHPITNGLYDMKMGPFSNDAGKCPTCSLGMLHCPGHFGHIALPLPCYHPLFLRNVVAIMKMTCPVCKTFAIPEKDKLVLVGQLQLLKYGLII
D2A5Z9/10-134              TGPKHLSFDSVVFSMFTKEEIKKLCITKICTPLTLDPLGHPLSGGLYDKSLGPMTEKSEPCGTCRKNLYFCPGHFGYIELPLPVVNPIFYRMIGTILRMACLSCFRFQIPEHVKYSITLQIRLLN-----
B3MEH6/11-132              -----MFPSDLEFAVFTDEEIRKLSVVKVITGITFDALGHPMPGGLYDIRLGSYGKCMDPCGTCLK-MQECSGHMGHIELGTPVYNPFFIKLVQRLLCIFCLHCYKLQMKDHEQQIIMLQLRLIDAGY--
B4GAV6/13-130              -------PSDLEFAVFTDQEIRKLSVVKVITGIAFDALGHPMPGGLYDIRMGSYGRCIDPCGTCLK-MQDCPGHMGHIELGTLVYNPFFIKLVQRLLCIFCLHCFKLQMKDHECEIIMLQLRLIDA----
B4QFV8/12-131              ------FPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCLK-LQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHEREIIMLQLRLIDAG---
A0A1W4U614/11-130          -----MFPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAMPGGLYDVRMGSYGRCMDPCGTCLK-MQDCPGHMGHIELGTPVYNPFFIKIVQRLLGIFCLHCYKLQMKDHECEIIMLQLRLIDA----
Q291D4/13-130              -------PSDLEFAVFTDQEIRKLSVVKVITGIAFDALGHPMPGGLYDIRMGSYGRCIDPCGTCLK-MQDCPGHMGHIELGTLVYNPFFIKLVQRLLCIFCLHCFKLQMKDHECEIIMLQLRLIDA----
B4HRE8/12-131              ------FPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCLK-LQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHEREIIMLQLRLIDAG---
B3NR27/12-130              ------FPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCLK-LQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHECEIIMLQLRLIDA----
A0A0J9RCM4/12-131          ------FPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGRCMDPCGTCLK-LQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHEREIIMLQLRLIDAG---
B4P775/12-130              ------FPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYGKCMDPCGTCLK-LQDCPGHMGHIELGTPVYNPFFIKIVQRLLCIFCLHCYKLQMKDHECEIIMLQLRLIDA----
#=GC scorecons             0000003655649556945795976766746447776999655699994579555434569699450643989959796955766695946374467464964945666466543575597796531000
#=GC scorecons_70          ____________*__**__**_*******_*__*******___*****__**________****___*__****_*****__*__**_*_*_*___*_*_**_*___**_**____*__****_______
#=GC scorecons_80          ____________*___*__**_*__*__*____*___***____****___*________*_**______****_***_*__*___*_*___*___*___*__*_______________*__*_______
#=GC scorecons_90          ____________*___*___*_*______________***____****___*________*_**______****_*_*_*______*_*___________*__*_______________*__*_______
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