# STOCKHOLM 1.0
#=GF ID 3.90.1110.10/FF/000014
#=GF DE DNA-directed RNA polymerase subunit beta
#=GF AC 3.90.1110.10/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 20.907
#=GS D0N9M5/197-370      AC D0N9M5
#=GS D0N9M5/197-370      OS Phytophthora infestans T30-4
#=GS D0N9M5/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS D0N9M5/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS A0A0N7L4I9/195-366  AC A0A0N7L4I9
#=GS A0A0N7L4I9/195-366  OS Plasmopara halstedii
#=GS A0A0N7L4I9/195-366  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0N7L4I9/195-366  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS M4C4J1/181-353      AC M4C4J1
#=GS M4C4J1/181-353      OS Hyaloperonospora arabidopsidis Emoy2
#=GS M4C4J1/181-353      DE Uncharacterized protein
#=GS M4C4J1/181-353      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis; 
#=GS A0A329SZR1/188-361  AC A0A329SZR1
#=GS A0A329SZR1/188-361  OS Phytophthora cactorum
#=GS A0A329SZR1/188-361  DE DNA-directed RNA polymerase subunit beta
#=GS A0A329SZR1/188-361  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS G5ABA9/189-362      AC G5ABA9
#=GS G5ABA9/189-362      OS Phytophthora sojae strain P6497
#=GS G5ABA9/189-362      DE DNA-directed RNA polymerase subunit beta
#=GS G5ABA9/189-362      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A0W8C3Q3/197-370  AC A0A0W8C3Q3
#=GS A0A0W8C3Q3/197-370  OS Phytophthora nicotianae
#=GS A0A0W8C3Q3/197-370  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0W8C3Q3/197-370  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS W2PZ62/197-370      AC W2PZ62
#=GS W2PZ62/197-370      OS Phytophthora parasitica INRA-310
#=GS W2PZ62/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS W2PZ62/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS H3G9F7/190-362      AC H3G9F7
#=GS H3G9F7/190-362      OS Phytophthora ramorum
#=GS H3G9F7/190-362      DE DNA-directed RNA polymerase subunit beta
#=GS H3G9F7/190-362      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS W2KUG5/197-374      AC W2KUG5
#=GS W2KUG5/197-374      OS Phytophthora parasitica
#=GS W2KUG5/197-374      DE DNA-directed RNA polymerase subunit beta
#=GS W2KUG5/197-374      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2N0E1/197-370      AC W2N0E1
#=GS W2N0E1/197-370      OS Phytophthora parasitica
#=GS W2N0E1/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS W2N0E1/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9ES40/197-370      AC V9ES40
#=GS V9ES40/197-370      OS Phytophthora parasitica P1569
#=GS V9ES40/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS V9ES40/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A080ZVN7/197-370  AC A0A080ZVN7
#=GS A0A080ZVN7/197-370  OS Phytophthora parasitica P1976
#=GS A0A080ZVN7/197-370  DE DNA-directed RNA polymerase subunit beta
#=GS A0A080ZVN7/197-370  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2IN72/197-370      AC W2IN72
#=GS W2IN72/197-370      OS Phytophthora parasitica
#=GS W2IN72/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS W2IN72/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2WQI7/197-370      AC W2WQI7
#=GS W2WQI7/197-370      OS Phytophthora parasitica CJ01A1
#=GS W2WQI7/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS W2WQI7/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2GIS4/197-370      AC W2GIS4
#=GS W2GIS4/197-370      OS Phytophthora parasitica
#=GS W2GIS4/197-370      DE DNA-directed RNA polymerase subunit beta
#=GS W2GIS4/197-370      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2Z171/200-373      AC W2Z171
#=GS W2Z171/200-373      OS Phytophthora parasitica P10297
#=GS W2Z171/200-373      DE DNA-directed RNA polymerase subunit beta
#=GS W2Z171/200-373      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 16
D0N9M5/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDALSASFEEASDLKVFTQQQALEYIGSKMNALTKIGAMGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCDNFNFRLKSIYVAHIVRRILFTDKDRTR
A0A0N7L4I9/195-366          -IEEDAKRNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDLPIVIVFRGMGVESDQEIV----SLVGSEPDICDAMSATFEEASDLKIFTQQQALEFIGSKMNTLTKIGTTGGRHRG-AGRPQKERSLVDAARSALAYLLLNHVPCENYNFRLKSIYVAHIVRRILFTDKDRTR
M4C4J1/181-353              -IEEDAKRNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVLKGMGVESDQEIV----SLVGSEADVCDALSASFEEASDLKVFTQQQALEYIGAKMNTQTTIGVTGGRHRGGFGRPMQDRNLVDAARSALANLVLNHVPCVNFNFRLKSIYVAHIVRRILFTDKDRTR
A0A329SZR1/188-361          IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
G5ABA9/189-362              IIEEDGKRNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSEPDICDAMSASFEEASDLKVFTQQQALEYIGSKMNTLTKIGAMGGRNRGGAGRPQQDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
A0A0W8C3Q3/197-370          IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2PZ62/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
H3G9F7/190-362              -IEEDAKKNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVLRGMGVESDQEIM----SLVGSESDICDALSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGAAGRPQQDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2KUG5/197-374              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2N0E1/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
V9ES40/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
A0A080ZVN7/197-370          IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2IN72/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2WQI7/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2GIS4/197-370              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
W2Z171/200-373              IIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIV----SLVGSESDICDAMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGGAGRPQNDRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTR
#=GC scorecons              3999969599999999999999999999999999999999999979999967999999999980000999999597999699799999999799999999899799966969967999899569996579799999999997979999996989999999999999999999999999
#=GC scorecons_70           _****_*_*******************************************************____******_***************************************_*******_*****_**************************************************
#=GC scorecons_80           _****_*_******************************************_************____******_*****_***************************__*_**_*******__***__*************_********_***************************
#=GC scorecons_90           _****_*_************************************_*****__***********____******_*_***_**_********_***********_***__*_**__******__***___*_**********_*_******_***************************
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