# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000613 #=GF DE Nuclear pore complex subunit #=GF AC 3.30.70.330/FF/000613 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 57.269 #=GS Q03790/245-355 AC Q03790 #=GS Q03790/245-355 OS Saccharomyces cerevisiae S288C #=GS Q03790/245-355 DE Nucleoporin NUP53 #=GS Q03790/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q03790/245-355 DR GO; GO:0003697; GO:0005515; GO:0005543; GO:0005643; GO:0006606; GO:0006607; GO:0006999; GO:0007088; GO:0017056; GO:0034501; GO:0044613; GO:0044615; GO:0045893; GO:0060188; GO:0072417; #=GS Q05166/259-403 AC Q05166 #=GS Q05166/259-403 OS Saccharomyces cerevisiae S288C #=GS Q05166/259-403 DE Nucleoporin ASM4 #=GS Q05166/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q05166/259-403 DR GO; GO:0003697; GO:0005515; GO:0005543; GO:0005643; GO:0006999; GO:0017056; GO:0031990; GO:0044613; #=GS R9XJL1/203-327 AC R9XJL1 #=GS R9XJL1/203-327 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9XJL1/203-327 DE AaceriADR272Wp #=GS R9XJL1/203-327 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS Q759K5/204-327 AC Q759K5 #=GS Q759K5/204-327 OS Eremothecium gossypii ATCC 10895 #=GS Q759K5/204-327 DE ADR272Wp #=GS Q759K5/204-327 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS H0GL67/245-355 AC H0GL67 #=GS H0GL67/245-355 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GL67/245-355 DE Nup53p #=GS H0GL67/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8VJK2/245-355 AC A0A0L8VJK2 #=GS A0A0L8VJK2/245-355 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VJK2/245-355 DE NUP53p FG-nucleoporin component of central core of nuclear pore complex (NPC) #=GS A0A0L8VJK2/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS G2WKK4/245-355 AC G2WKK4 #=GS G2WKK4/245-355 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WKK4/245-355 DE K7_Nup53p #=GS G2WKK4/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZML1/245-355 AC A6ZML1 #=GS A6ZML1/245-355 OS Saccharomyces cerevisiae YJM789 #=GS A6ZML1/245-355 DE Karyopherin docking complex component of the nuclear pore complex #=GS A6ZML1/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LM40/245-355 AC B3LM40 #=GS B3LM40/245-355 OS Saccharomyces cerevisiae RM11-1a #=GS B3LM40/245-355 DE Karyopherin docking complex component of the nuclear pore complex #=GS B3LM40/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GQ92/245-355 AC C7GQ92 #=GS C7GQ92/245-355 OS Saccharomyces cerevisiae JAY291 #=GS C7GQ92/245-355 DE Nup53p #=GS C7GQ92/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1P5N4/245-355 AC N1P5N4 #=GS N1P5N4/245-355 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P5N4/245-355 DE Nup53p #=GS N1P5N4/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZF10/245-355 AC C8ZF10 #=GS C8ZF10/245-355 OS Saccharomyces cerevisiae EC1118 #=GS C8ZF10/245-355 DE Nup53p #=GS C8ZF10/245-355 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WC74/259-403 AC G2WC74 #=GS G2WC74/259-403 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WC74/259-403 DE K7_Asm4p #=GS G2WC74/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1P445/259-403 AC N1P445 #=GS N1P445/259-403 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P445/259-403 DE Asm4p #=GS N1P445/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZXN9/259-403 AC A6ZXN9 #=GS A6ZXN9/259-403 OS Saccharomyces cerevisiae YJM789 #=GS A6ZXN9/259-403 DE Nuclear pore complex subunit #=GS A6ZXN9/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A0A0L8VT54/259-403 AC A0A0L8VT54 #=GS A0A0L8VT54/259-403 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VT54/259-403 DE ASM4p FG-nucleoporin component of central core of nuclear pore complex (NPC) #=GS A0A0L8VT54/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS B5VFH9/259-403 AC B5VFH9 #=GS B5VFH9/259-403 OS Saccharomyces cerevisiae AWRI1631 #=GS B5VFH9/259-403 DE YDL088Cp-like protein #=GS B5VFH9/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GJM6/259-403 AC C7GJM6 #=GS C7GJM6/259-403 OS Saccharomyces cerevisiae JAY291 #=GS C7GJM6/259-403 DE Asm4p #=GS C7GJM6/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LGY3/259-403 AC B3LGY3 #=GS B3LGY3/259-403 OS Saccharomyces cerevisiae RM11-1a #=GS B3LGY3/259-403 DE Nucleoporin ASM4 #=GS B3LGY3/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8Z6L5/259-403 AC C8Z6L5 #=GS C8Z6L5/259-403 OS Saccharomyces cerevisiae EC1118 #=GS C8Z6L5/259-403 DE Asm4p #=GS C8Z6L5/259-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GF SQ 20 Q03790/245-355 ----STNWDDHAIIIFGYPETIANSIILHFANFGEILEDFRVIKDFKKLNSKN------------------------MSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- Q05166/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFRGSLIGCIPYSKNAVEQLAGCKIDNV- R9XJL1/203-327 SASASASHNESAVLVFGYPESISNQVILHFSKFGNILEDFEVLRGVSGMRPTAMKV---------------------SGRQHAENRKKYPIFTGDGWIKLTYDSPSSALRALQENGTVYGGCLVGCVPYSKQAVEQLASCHIEKSD Q759K5/204-327 -ASASASHNESAVLVFGYPESISNQVILHFSKFGNILEDFEVLRGVSGMRPTAMKV---------------------SGRQHTENRKKYPIFTGDGWIKLTYDSPSSALRALQENGTVYGGCLVGCVPYSKQAVEQLASCHIEKAD H0GL67/245-355 ----STNWDDHAIIIFGYPETIANSIIFHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- A0A0L8VJK2/245-355 ----STNWDDHAIIIFGYPETIANSIIFHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- G2WKK4/245-355 ----STNWDDHSIIIFGYPETIANSIILHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- A6ZML1/245-355 ----STNWDDHAIIIFGYPETIANSIILHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- B3LM40/245-355 ----STNWDDHAIIIFGYPETIANSIIFHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- C7GQ92/245-355 ----STNWDDHAIIIFGYPETIANSIIFHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- N1P5N4/245-355 ----STNWDDHAIIIFGYPETIANSIIFHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- C8ZF10/245-355 ----STNWDDHAIIIFGYPETIANSIIFHFANFGEILEDFRVIKDFKKLNSKN------------------------KSKSPSLTAQKYPIYTGDGWVKLTYKSELSKSRALQENGIIMNGTLIGCVSYSPAALKQLAS------- G2WC74/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFRGSLIGCIPYSKNAVEQLAGCKIDNV- N1P445/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- A6ZXN9/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- A0A0L8VT54/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- B5VFH9/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- C7GJM6/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- B3LGY3/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- C8Z6L5/259-403 HETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQVLRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTYNSPSSALRALQENGTIFHGSLIGCIPYSKNAVEQLAGCKIDNV- #=GC scorecons 11229564545887799999696956939965995969995967436567655122111111111111111111111667554465699997997698999959559559999999685495989976995596699962222210 #=GC scorecons_70 ____*______*********_*_*__*_**__**_*****_***_____*___________________________*_*______*********_******_*__*__*******_*__*_*****_**__**_***________ #=GC scorecons_80 ____*______***_*****_*_*__*_**__**_*_***_*_______*_____________________________________*******__******_*__*__*******_*__*_****__**__*__***________ #=GC scorecons_90 ____*______**__*****_*_*__*_**__**_*_***_*_____________________________________________****_**__******_*__*__*******_*__*_****__**__*__***________ //