# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000601
#=GF DE CC1-like, splicing factor
#=GF AC 3.30.70.330/FF/000601
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 57.963
#=GS F4ILE1/328-441      AC F4ILE1
#=GS F4ILE1/328-441      OS Arabidopsis thaliana
#=GS F4ILE1/328-441      DE Splicing factor, CC1-like protein
#=GS F4ILE1/328-441      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4ILE1/328-441      DR GO; GO:0005829; 
#=GS A0A178VT14/279-392  AC A0A178VT14
#=GS A0A178VT14/279-392  OS Arabidopsis thaliana
#=GS A0A178VT14/279-392  DE Uncharacterized protein
#=GS A0A178VT14/279-392  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9ZVW9/279-392      AC Q9ZVW9
#=GS Q9ZVW9/279-392      OS Arabidopsis thaliana
#=GS Q9ZVW9/279-392      DE At2g16940
#=GS Q9ZVW9/279-392      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4ILE0/317-430      AC F4ILE0
#=GS F4ILE0/317-430      OS Arabidopsis thaliana
#=GS F4ILE0/317-430      DE Splicing factor, CC1-like protein
#=GS F4ILE0/317-430      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8LPG3/139-251      AC Q8LPG3
#=GS Q8LPG3/139-251      OS Arabidopsis thaliana
#=GS Q8LPG3/139-251      DE Putative splicing factor
#=GS Q8LPG3/139-251      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F6I0Z0/339-429      AC F6I0Z0
#=GS F6I0Z0/339-429      OS Vitis vinifera
#=GS F6I0Z0/339-429      DE Uncharacterized protein
#=GS F6I0Z0/339-429      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A0D6QVU0/331-418  AC A0A0D6QVU0
#=GS A0A0D6QVU0/331-418  OS Araucaria cunninghamii
#=GS A0A0D6QVU0/331-418  DE Uncharacterized protein
#=GS A0A0D6QVU0/331-418  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Pinidae; Araucariales; Araucariaceae; Araucaria; Araucaria cunninghamii; 
#=GS A0A251LHF6/145-253  AC A0A251LHF6
#=GS A0A251LHF6/145-253  OS Manihot esculenta
#=GS A0A251LHF6/145-253  DE Uncharacterized protein
#=GS A0A251LHF6/145-253  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot; Manihot esculenta; 
#=GS A0A151TQ59/295-401  AC A0A151TQ59
#=GS A0A151TQ59/295-401  OS Cajanus cajan
#=GS A0A151TQ59/295-401  DE RNA-binding protein 39
#=GS A0A151TQ59/295-401  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; 
#=GS A0A385JI07/326-431  AC A0A385JI07
#=GS A0A385JI07/326-431  OS Populus tomentosa
#=GS A0A385JI07/326-431  DE CC1-like, splicing factor
#=GS A0A385JI07/326-431  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus tomentosa; 
#=GS V4ME69/286-398      AC V4ME69
#=GS V4ME69/286-398      OS Eutrema salsugineum
#=GS V4ME69/286-398      DE Uncharacterized protein
#=GS V4ME69/286-398      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A0D3D3M0/308-416  AC A0A0D3D3M0
#=GS A0A0D3D3M0/308-416  OS Brassica oleracea var. oleracea
#=GS A0A0D3D3M0/308-416  DE Uncharacterized protein
#=GS A0A0D3D3M0/308-416  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS R0GAY1/271-381      AC R0GAY1
#=GS R0GAY1/271-381      OS Capsella rubella
#=GS R0GAY1/271-381      DE Uncharacterized protein
#=GS R0GAY1/271-381      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS A0A067KB07/320-427  AC A0A067KB07
#=GS A0A067KB07/320-427  OS Jatropha curcas
#=GS A0A067KB07/320-427  DE Uncharacterized protein
#=GS A0A067KB07/320-427  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha; Jatropha curcas; 
#=GS D7L889/280-392      AC D7L889
#=GS D7L889/280-392      OS Arabidopsis lyrata subsp. lyrata
#=GS D7L889/280-392      DE Uncharacterized protein
#=GS D7L889/280-392      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS B9H1K1/326-431      AC B9H1K1
#=GS B9H1K1/326-431      OS Populus trichocarpa
#=GS B9H1K1/326-431      DE Uncharacterized protein
#=GS B9H1K1/326-431      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; 
#=GS I1NF91/326-433      AC I1NF91
#=GS I1NF91/326-433      OS Glycine max
#=GS I1NF91/326-433      DE Uncharacterized protein
#=GS I1NF91/326-433      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS V7BA94/317-424      AC V7BA94
#=GS V7BA94/317-424      OS Phaseolus vulgaris
#=GS V7BA94/317-424      DE Uncharacterized protein
#=GS V7BA94/317-424      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS A0A445F381/326-433  AC A0A445F381
#=GS A0A445F381/326-433  OS Glycine soja
#=GS A0A445F381/326-433  DE RNA-binding protein 39 isoform A
#=GS A0A445F381/326-433  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS A0A2K1Z7J6/316-424  AC A0A2K1Z7J6
#=GS A0A2K1Z7J6/316-424  OS Populus trichocarpa
#=GS A0A2K1Z7J6/316-424  DE Uncharacterized protein
#=GS A0A2K1Z7J6/316-424  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; 
#=GS K7LLY3/323-428      AC K7LLY3
#=GS K7LLY3/323-428      OS Glycine max
#=GS K7LLY3/323-428      DE Uncharacterized protein
#=GS K7LLY3/323-428      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 21
F4ILE1/328-441              -PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
A0A178VT14/279-392          -PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
Q9ZVW9/279-392              -PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
F4ILE0/317-430              -PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
Q8LPG3/139-251              --YSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
F6I0Z0/339-429              ---SGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVSVVTDQAGLQDIG----------------------
A0A0D6QVU0/331-418          ---SGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPTDPETGQCKGFGFVQFARLEDARAAQSLNGQLEIAGRIIKVSAVSDQVGLQ-------------------------
A0A251LHF6/145-253          --YSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSTVTDQTGMQDGG--TNAGDFDDDEGGGLALNA--
A0A151TQ59/295-401          --YSGGARRLYVGNLHISIGEADLRGVFEAFGQVELVQLPLD-ESGQCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEVG--GNTGDFDDDEGGGLSL----
A0A385JI07/326-431          --YSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHD-ESGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAVTDQTGTQDGG--TNVGDFDDDEGGGLA-----
V4ME69/286-398              -PYSGGARRLYVGNLHVNMSEDDLRKVFEPFGSVELVQVPRD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIANRAIKVSAVTDQTEVPEAGQSQNTGDLDDDDGAGLSLNAQ-
A0A0D3D3M0/308-416          --YSGGARRLYVGNLHVNMSEDDLRKVFESFGIVELVQVPRD-ETGHCKGFGFVQFARLEDARNAVNLNGQLEIAGRAIKVSAVTDQTEVPDAGQAQNTGDLDDDDGAGLSL----
R0GAY1/271-381              ----GGARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
A0A067KB07/320-427          ASYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPLD-DTGHCKGFGFVQFARLEDARNALNLNGQVEIAGRAIKVSTVTDQTGMQDGG--TNAGDFDDDEGGGLA-----
D7L889/280-392              --YSGGARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS
B9H1K1/326-431              --YSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHD-ESGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAVTDQTGTQDGG--TNVGDFDDDEGGGLA-----
I1NF91/326-433              ---SGGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEFG--GNTGDFDDDEGGGMSLNA--
V7BA94/317-424              -PYSGGARRLYVGNLHISMSEADIRKVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLDDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEIG--GNTGDFDDDEGGGLSL----
A0A445F381/326-433          ---SGGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEFG--GNTGDFDDDEGGGMSLNA--
A0A2K1Z7J6/316-424          --YTGGARRLYIGNLHFNITEDQLRQVFEPFGAVELVQLPHD-EGGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAVTDQAGAQDGG--TNVGDFDDDEGGGLALNA--
K7LLY3/323-428              ---SGGARKLYVGNLHVSITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEVG--GNTGDFDDDEGGGLSL----
#=GC scorecons              00379999899899995665965795999599499999693908695999999999999899979569999789689599997989956566371034466466646565442200
#=GC scorecons_70           ___*************_**_**_**_***_**_*******_*_*_*_******************__**********_*********_*____*______________________
#=GC scorecons_80           ___*************____*__**_***_**_*****_*_*_*_*_******************__*******_**_*********______*______________________
#=GC scorecons_90           ____****_*******____*___*_***_**_*****_*_*_*_*_****************_*__****_**_**_****_****_____________________________
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