# STOCKHOLM 1.0 #=GF ID 3.10.20.370/FF/000002 #=GF DE Gag-Pol polyprotein #=GF AC 3.10.20.370/FF/000002 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 25.485 #=GS 4mh8A04/342-417 AC P03355 #=GS 4mh8A04/342-417 OS Moloney murine leukemia virus isolate Shinnick #=GS 4mh8A04/342-417 DE Gag-Pol polyprotein #=GS 4mh8A04/342-417 DR CATH; 4mh8; A:361-436; #=GS 4mh8A04/342-417 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 4mh8A04/342-417 DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; #=GS 4mh8A04/342-417 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 4hkqA04/371-446 AC A1Z651 #=GS 4hkqA04/371-446 OS Xenotropic MuLV-related virus VP62 #=GS 4hkqA04/371-446 DE Gag-Pol polyprotein #=GS 4hkqA04/371-446 DR CATH; 4hkq; A:361-436; #=GS 4hkqA04/371-446 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS 4hkqA04/371-446 DR GO; GO:0042802; #=GS 4hkqA04/371-446 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q8UN00/1023-1094 AC Q8UN00 #=GS Q8UN00/1023-1094 OS Moloney murine leukemia virus #=GS Q8UN00/1023-1094 DE Pr180 Gag-Pro-Pol polyprotein #=GS Q8UN00/1023-1094 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q8UN00/1023-1094 DR GO; GO:0005515; #=GS F0EVW6/18-92 AC F0EVW6 #=GS F0EVW6/18-92 OS Haemophilus parainfluenzae ATCC 33392 #=GS F0EVW6/18-92 DE Uncharacterized protein #=GS F0EVW6/18-92 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus parainfluenzae; #=GS G4D789/18-92 AC G4D789 #=GS G4D789/18-92 OS Peptoniphilus indolicus ATCC 29427 #=GS G4D789/18-92 DE Uncharacterized protein #=GS G4D789/18-92 DR ORG; Bacteria; Firmicutes; Tissierellia; Tissierellales; Peptoniphilaceae; Peptoniphilus; Peptoniphilus indolicus; #=GS E6KB97/18-92 AC E6KB97 #=GS E6KB97/18-92 OS Prevotella buccae ATCC 33574 #=GS E6KB97/18-92 DE Uncharacterized protein #=GS E6KB97/18-92 DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella buccae; #=GS F5RQU6/18-92 AC F5RQU6 #=GS F5RQU6/18-92 OS Centipeda periodontii DSM 2778 #=GS F5RQU6/18-92 DE Uncharacterized protein #=GS F5RQU6/18-92 DR ORG; Bacteria; Firmicutes; Negativicutes; Selenomonadales; Selenomonadaceae; Centipeda; Centipeda periodontii; #=GS E8JS20/18-92 AC E8JS20 #=GS E8JS20/18-92 OS Streptococcus equinus ATCC 9812 #=GS E8JS20/18-92 DE Uncharacterized protein #=GS E8JS20/18-92 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus equinus; #=GS F2BGW3/18-92 AC F2BGW3 #=GS F2BGW3/18-92 OS Neisseria bacilliformis ATCC BAA-1200 #=GS F2BGW3/18-92 DE Uncharacterized protein #=GS F2BGW3/18-92 DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria bacilliformis; #=GS A0A074LLR4/385-456 AC A0A074LLR4 #=GS A0A074LLR4/385-456 OS Tumebacillus flagellatus #=GS A0A074LLR4/385-456 DE Uncharacterized protein #=GS A0A074LLR4/385-456 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus; Tumebacillus flagellatus; #=GS Q7ZL03/27-99 AC Q7ZL03 #=GS Q7ZL03/27-99 OS Recombinant M-MuLV/RaLV retrovirus #=GS Q7ZL03/27-99 DE Pol protein #=GS Q7ZL03/27-99 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Recombinant M-MuLV/RaLV retrovirus; #=GS F2CB34/18-92 AC F2CB34 #=GS F2CB34/18-92 OS Streptococcus sanguinis SK330 #=GS F2CB34/18-92 DE Uncharacterized protein #=GS F2CB34/18-92 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sanguinis; #=GS F9DME3/3-77 AC F9DME3 #=GS F9DME3/3-77 OS Prevotella pallens ATCC 700821 #=GS F9DME3/3-77 DE Uncharacterized protein #=GS F9DME3/3-77 DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella pallens; #=GS P03355/1023-1094 AC P03355 #=GS P03355/1023-1094 OS Moloney murine leukemia virus isolate Shinnick #=GS P03355/1023-1094 DE Gag-Pol polyprotein #=GS P03355/1023-1094 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03355/1023-1094 DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; #=GS P03355/1023-1094 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS A1Z651/1021-1092 AC A1Z651 #=GS A1Z651/1021-1092 OS Xenotropic MuLV-related virus VP62 #=GS A1Z651/1021-1092 DE Gag-Pol polyprotein #=GS A1Z651/1021-1092 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS A1Z651/1021-1092 DR GO; GO:0042802; #=GS A1Z651/1021-1092 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J3/1021-1092 AC Q2F7J3 #=GS Q2F7J3/1021-1092 OS Xenotropic MuLV-related virus VP35 #=GS Q2F7J3/1021-1092 DE Gag-Pol polyprotein #=GS Q2F7J3/1021-1092 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J3/1021-1092 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS D0UFA3/1021-1092 AC D0UFA3 #=GS D0UFA3/1021-1092 OS Xenotropic MuLV-related virus #=GS D0UFA3/1021-1092 DE Putative gag-pro-pol polyprotein #=GS D0UFA3/1021-1092 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS D0UFA3/1021-1092 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J0/1021-1092 AC Q2F7J0 #=GS Q2F7J0/1021-1092 OS Xenotropic MuLV-related virus VP42 #=GS Q2F7J0/1021-1092 DE Gag-Pol polyprotein #=GS Q2F7J0/1021-1092 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J0/1021-1092 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P08361/1021-1092 AC P08361 #=GS P08361/1021-1092 OS Cas-Br-E murine leukemia virus #=GS P08361/1021-1092 DE Gag-Pol polyprotein #=GS P08361/1021-1092 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P08361/1021-1092 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P03356/1022-1093 AC P03356 #=GS P03356/1022-1093 OS AKR (endogenous) murine leukemia virus #=GS P03356/1022-1093 DE Gag-Pol polyprotein #=GS P03356/1022-1093 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03356/1022-1093 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P26809/1023-1094 AC P26809 #=GS P26809/1023-1094 OS Friend murine leukemia virus (ISOLATE FB29) #=GS P26809/1023-1094 DE Gag-Pol polyprotein #=GS P26809/1023-1094 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26809/1023-1094 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q7SVK7/1022-1093 AC Q7SVK7 #=GS Q7SVK7/1022-1093 OS Murine leukemia virus (strain BM5 ECO) #=GS Q7SVK7/1022-1093 DE Gag-pol polyprotein #=GS Q7SVK7/1022-1093 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q7SVK7/1022-1093 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P26810/1024-1095 AC P26810 #=GS P26810/1024-1095 OS Friend murine leukemia virus (ISOLATE 57) #=GS P26810/1024-1095 DE Gag-Pol polyprotein #=GS P26810/1024-1095 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26810/1024-1095 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P11227/1022-1093 AC P11227 #=GS P11227/1022-1093 OS Radiation murine leukemia virus #=GS P11227/1022-1093 DE Gag-Pol polyprotein #=GS P11227/1022-1093 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P11227/1022-1093 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P26808/1023-1094 AC P26808 #=GS P26808/1023-1094 OS Friend murine leukemia virus (ISOLATE PVC-211) #=GS P26808/1023-1094 DE Gag-Pol polyprotein #=GS P26808/1023-1094 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26808/1023-1094 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS F0IBW0/18-92 AC F0IBW0 #=GS F0IBW0/18-92 OS Streptococcus sanguinis SK115 #=GS F0IBW0/18-92 DE Uncharacterized protein #=GS F0IBW0/18-92 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sanguinis; #=GS Q9E7M1/1021-1092 AC Q9E7M1 #=GS Q9E7M1/1021-1092 OS DG-75 Murine leukemia virus #=GS Q9E7M1/1021-1092 DE Putative gag-pro-pol polyprotein #=GS Q9E7M1/1021-1092 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A126QCH6/1025-1096 AC A0A126QCH6 #=GS A0A126QCH6/1025-1096 OS Murine leukemia virus #=GS A0A126QCH6/1025-1096 DE Putative gag-pro-pol polyprotein #=GS A0A126QCH6/1025-1096 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q5PYI3/1018-1089 AC Q5PYI3 #=GS Q5PYI3/1018-1089 OS Murine leukemia virus #=GS Q5PYI3/1018-1089 DE Gag-pol polyprotein #=GS Q5PYI3/1018-1089 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q90RL4/484-555 AC Q90RL4 #=GS Q90RL4/484-555 OS Murine leukemia virus #=GS Q90RL4/484-555 DE Pol protein #=GS Q90RL4/484-555 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q60FS6/484-555 AC Q60FS6 #=GS Q60FS6/484-555 OS Murine leukemia virus #=GS Q60FS6/484-555 DE POL polyprotein #=GS Q60FS6/484-555 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q7ZKZ7/485-556 AC Q7ZKZ7 #=GS Q7ZKZ7/485-556 OS Recombinant M-MuLV/RaLV retrovirus #=GS Q7ZKZ7/485-556 DE Pol protein #=GS Q7ZKZ7/485-556 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Recombinant M-MuLV/RaLV retrovirus; #=GS Q7ZL04/485-556 AC Q7ZL04 #=GS Q7ZL04/485-556 OS Recombinant M-MuLV/RaLV retrovirus #=GS Q7ZL04/485-556 DE Pol protein #=GS Q7ZL04/485-556 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Recombinant M-MuLV/RaLV retrovirus; #=GS T2AUF0/154-225 AC T2AUF0 #=GS T2AUF0/154-225 OS PreXMRV-1/PreXMRV-2 recombinant #=GS T2AUF0/154-225 DE Gag-pro-pol polyprotein #=GS T2AUF0/154-225 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GF SQ 34 4mh8A04/342-417 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIKA 4hkqA04/371-446 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVILA Q8UN00/1023-1094 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- F0EVW6/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- G4D789/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- E6KB97/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- F5RQU6/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- E8JS20/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- F2BGW3/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- A0A074LLR4/385-456 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIG- Q7ZL03/27-99 ---KPFELFVDEKQGYAKGVLTQRLGPWKRPVAYLSKKLDPVASGWPPCLRMVAAIAVLTKDAGKLTLGQPLTIRA F2CB34/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- F9DME3/3-77 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- P03355/1023-1094 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- A1Z651/1021-1092 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- Q2F7J3/1021-1092 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- D0UFA3/1021-1092 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- Q2F7J0/1021-1092 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- P08361/1021-1092 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- P03356/1022-1093 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLRKDAGKLTMGQPLVIL- P26809/1023-1094 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- Q7SVK7/1022-1093 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- P26810/1024-1095 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDVGKLTMGQPLVIL- P11227/1022-1093 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- P26808/1023-1094 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- F0IBW0/18-92 DLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- Q9E7M1/1021-1092 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAARWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- A0A126QCH6/1025-1096 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- Q5PYI3/1018-1089 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDASKLTMGQPLVIL- Q90RL4/484-555 ---KPFELFVDEKQGYAKGVLTQKLGPWRRSVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- Q60FS6/484-555 ---KPFELFVDEKQGYAKGVLTQRLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTLGQPLVVL- Q7ZKZ7/485-556 ---KPFELFVDEKQGYAKGVLTQRLGPWKRPVAYLSKKLDPVASGWPPCLRMVAAIAVLTKDAGKLTLGQPLTIL- Q7ZL04/485-556 ---KPFELFVDEKQGYAKGVLTQRLGPWKRPVAHLSKKLDPVASGWPPCLRMVAAIAVLTKDAGKLTLGQPLTIL- T2AUF0/154-225 ---KPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIL- #=GC scorecons 1119999999999999999999979999798998999999999789999999999999989988999799997860 #=GC scorecons_70 ___************************************************************************_ #=GC scorecons_80 ___***********************************************************************__ #=GC scorecons_90 ___********************_****_**************_***********************_****_*__ //