# STOCKHOLM 1.0
#=GF ID 1.10.940.10/FF/000017
#=GF DE Transcription antitermination factor NusB
#=GF AC 1.10.940.10/FF/000017
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 18.540
#=GS Q89YY9/127-258      AC Q89YY9
#=GS Q89YY9/127-258      OS Bacteroides thetaiotaomicron VPI-5482
#=GS Q89YY9/127-258      DE Transcription antitermination protein NusB
#=GS Q89YY9/127-258      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides thetaiotaomicron; 
#=GS J9GHN7/130-258      AC J9GHN7
#=GS J9GHN7/130-258      OS gut metagenome
#=GS J9GHN7/130-258      DE Transcription antitermination factor NusB
#=GS J9GHN7/130-258      DR ORG; gut metagenome; 
#=GS I9Q1R5/175-306      AC I9Q1R5
#=GS I9Q1R5/175-306      OS Bacteroides caccae CL03T12C61
#=GS I9Q1R5/175-306      DE Transcription antitermination protein NusB
#=GS I9Q1R5/175-306      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae; 
#=GS A0A372UPL8/127-258  AC A0A372UPL8
#=GS A0A372UPL8/127-258  OS Bacteroides sp. AM23-12
#=GS A0A372UPL8/127-258  DE Transcription antitermination protein NusB
#=GS A0A372UPL8/127-258  DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp. AM23-12; 
#=GS U2CP34/175-306      AC U2CP34
#=GS U2CP34/175-306      OS Bacteroides pyogenes F0041
#=GS U2CP34/175-306      DE Transcription antitermination protein NusB
#=GS U2CP34/175-306      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides pyogenes; 
#=GS R5U6A7/175-306      AC R5U6A7
#=GS R5U6A7/175-306      OS Bacteroides caccae CAG:21
#=GS R5U6A7/175-306      DE Transcription antitermination protein NusB
#=GS R5U6A7/175-306      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae CAG:21; 
#=GS A5ZGM6/175-306      AC A5ZGM6
#=GS A5ZGM6/175-306      OS Bacteroides caccae ATCC 43185
#=GS A5ZGM6/175-306      DE Transcription antitermination protein NusB
#=GS A5ZGM6/175-306      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae; 
#=GS A0A174I2P7/175-306  AC A0A174I2P7
#=GS A0A174I2P7/175-306  OS Bacteroides caccae
#=GS A0A174I2P7/175-306  DE Transcription antitermination protein NusB
#=GS A0A174I2P7/175-306  DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae; 
#=GS A0A2J6AD59/127-258  AC A0A2J6AD59
#=GS A0A2J6AD59/127-258  OS Bacteroides thetaiotaomicron
#=GS A0A2J6AD59/127-258  DE Transcription antitermination protein NusB
#=GS A0A2J6AD59/127-258  DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides thetaiotaomicron; 
#=GS W4PRS1/175-306      AC W4PRS1
#=GS W4PRS1/175-306      OS Bacteroides pyogenes JCM 10003
#=GS W4PRS1/175-306      DE Transcription antitermination protein NusB
#=GS W4PRS1/175-306      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides pyogenes; 
#=GF SQ 10
Q89YY9/127-258              KEIVDTFVLKTIKRFEEKNGANQELLPEFKDDEDQEFARRLFRRTILNADYYRHLVSENTKNWDLDRIAFMDIIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTAKSGSFINGTLDGIVNQLKKEGKLT
J9GHN7/130-258              ---VDTFVLKTIKRFDEKNGAAQPLLPEFKDDEDQEFARRLFRRTILNADYYRHLVSENTKNWDLDRIAFMDVIIMQIALAEILSFPNIPVSVTLNEYVEIAKRYSTTKSGSFINGTLDGIVNRLRKEGKLT
I9Q1R5/175-306              KEIVDTFVLKTIKRFDEKKGANQELLPEFKDDEDQEFARRLFRRTILNSDYYRHLVSENTKNWELDRIAFMDVIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTSKSGSFINGTLDGIVNQLKKEGKLT
A0A372UPL8/127-258          KEIVDTFVLKTIKRFEEKNGANQELLPEFKDDEDQEFARRLFRRTILNADYYRHLVSENTKNWDLDRIAFMDIIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTAKSGSFINGTLDGIVNQLKKEGKLT
U2CP34/175-306              KEIVDTFVLKTIKRFDPKNGADQELLPEFKDEEDQEFARRLFRRTLLNSDYYRHLISENTKNWDLDRIAFMDIVIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTLKSGSFINGTLDGIVNQLKKEGKLI
R5U6A7/175-306              KEIVDTFVLKTIKRFDEKKGANQELLPEFKDDEDQEFARRLFRRTILNSDYYRHLVSENTKNWELDRIAFMDVIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTSKSGSFINGTLDGIVNQLKKEGKLT
A5ZGM6/175-306              KEIVDTFVLKTIKRFDEKKGANQELLPEFKDDEDQEFARRLFRRTILNSDYYRHLVSENTKNWELDRIAFMDVIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTSKSGSFINGTLDGIVNQLKKEGKLT
A0A174I2P7/175-306          KEIVDTFVLKTIKRFDEKKGANQELLPEFKDDEDQEFARRLFRRTILNSDYYRHLVSENTKNWELDRIAFMDVIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTSKSGSFINGTLDGIVNQLKKEGKLT
A0A2J6AD59/127-258          KEIVDTFVLKTIKRFEEKNGANQELLPEFKDDEDQEFARRLFRRTILNADYYRHLVSENTKNWDLDRIAFMDIIIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTAKSGSFINGTLDGIVNQLKKEGKLT
W4PRS1/175-306              KEIVDTFVLKTIKRFDPKNGADQELLPEFKDEEDQEFARRLFRRTLLNSDYYRHLISENTKNWDLDRIAFMDIVIMQTALAEILSFPNIPVSVSLNEYVEIAKLYSTLKSGSFINGTLDGIVNQLKKEGKLI
#=GC scorecons              555999999999999759699596999999979999999999999699599999979999999799999999679996999999999999999699999999959993999999999999999797999996
#=GC scorecons_70           ___*************_****_*_************************_******************************************************_***_************************
#=GC scorecons_80           ___*************_*_**_*_*********************_**_***********************_****_***************_*********_***_***************_*******_
#=GC scorecons_90           ___************__*_**_*_*******_*************_**_******_*******_********__***_***************_*********_***_***************_*_*****_
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