# STOCKHOLM 1.0
#=GF ID 1.10.510.10/FF/001795
#=GF DE Serine/threonine-protein kinase Nek1
#=GF AC 1.10.510.10/FF/001795
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.636
#=GS Q4GYR0/18-313     AC Q4GYR0
#=GS Q4GYR0/18-313     OS Trypanosoma brucei brucei TREU927
#=GS Q4GYR0/18-313     DE Protein kinase, putative
#=GS Q4GYR0/18-313     DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q4GYR0/18-313     DR GO; GO:0005737; 
#=GS F6W8V2/27-304     AC F6W8V2
#=GS F6W8V2/27-304     OS Ciona intestinalis
#=GS F6W8V2/27-304     DE Uncharacterized protein
#=GS F6W8V2/27-304     DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A1D6MW39/1-311  AC A0A1D6MW39
#=GS A0A1D6MW39/1-311  OS Zea mays
#=GS A0A1D6MW39/1-311  DE Serine/threonine-protein kinase Nek1
#=GS A0A1D6MW39/1-311  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS H3FQ10/1-304      AC H3FQ10
#=GS H3FQ10/1-304      OS Pristionchus pacificus
#=GS H3FQ10/1-304      DE Uncharacterized protein
#=GS H3FQ10/1-304      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 4
Q4GYR0/18-313             RRQLLGRRYHVVTDIGKGMFSEAFLVEDKQAGGALAVVKSSRIAQGNAEGMNREQQLRLAISEARIMAMFNDDGVVRLLDFWCEDGIDSICFLMEYCAGGDLEAYLRLR----YPLAEGLLLVFFVQCLLAVAHIHT--KGVIHRDLKPANILVAEGDSGNTVPTLKLTDFGLSAMNNAGTALEELSLVGTPLYMSPEVIQHGACVFGSDVWSLGVVFYRLITNEQPFNALNQR-ALHFSIVNTQPPHPCSVAKHYSRELGDLVMVMLEKDIAKRPTARYLIASPLFERVLQRSPWRSRPLRG--------------------------------------------------------------------
F6W8V2/27-304             ----VAKRYHIDKELGKGKYGIALQVSDREDNNMKKVLKRVQIAS-----CRDIQTVR---QEAGILSSLNHKYIVQFLSSFFD-G-DWFCIIMELCEGGTLATKIEYAKSEQLPIDAQDILRWTYQVLDGLQYAHSRDKKVLHRDIKPSNILLVGNDA-------KLSDFGCSKQLDASTY-QASSIVGTILYLAPEVHNDQVYSDKSDVWSVGCILYELFTLQPICGSAAVAMQIIPYLKHMDTM---PTPTLPDERFQDLFLRMMEKDPRNRASAAEVLEDRHFEVF------QTNNGSN-------------------------------------------------------------AGSEGL-
A0A1D6MW39/1-311          -----MDQYEVLEQIGKGAFGSALLMQ--------------------------------------LIATVRNPFIVEYKDSWVEKG-CYVCIVIGYCEGGDMAEVIKRANG--NHFSEEKLCKWLVQLLMALDYLHA--NHILHRDVKCSNIFIARDQS------IRLGDFGLAKILTSDDL--ASSVVGTPSYMCPELLADIPYGTKSDIWSLGCCIYEMTALRPAFKAFDMQ-ALISKITKSIVS---PLPTRYSGSFRGLIKSMLRKSPEHRPSAAELLKHVHLQPYVLQVQLKSSPSRNMSPIYQALTDKVKKMTFPSDITDSARRVARRNSLGNERTVTFCKPSPERNSISSTRSIKEYTTTQSVK
H3FQ10/1-304              ME--IEDKFEKLRVVGRGAFGVCWLCKKKGEENAEKVIIKMIPLHGLS--TKEEQEIK---GEADLLRKMKHPMIIGYYDYFTC-A-ESIAIVMQFAEGGTLENLIRDQRG--VHFSEATVLKYFTQILLGLEYMHS--LNIVHRDLKTQNILLNKKRT-----LIKLSDFGVSKQLNTRSV--ASTLIGTPNYLSPEMVEGRSYNMKSDIWALGCVFYELFMLRRAFDGENLP-AIVMKITQQRYP---PLGNHVSKESRDLVSKILSGNEEKRPPVKEILTCPLILSYTLTVVLDT--GRIMGSVPE------KRKTLPNQWAMRSR-----------------------------------TGSDSIT
#=GC scorecons            00002245744332597937625353323111220242111122110000111141230001441553234432773426342306033455564555994643164131200244453154343393935637394003265999593399654334400000027949993653544332005565799539649953342362159969669544956345444634142305532363322230006444326333469422663542349646445622344324121212351235310000000000010010100000001000000000000000000000000000000000002222220
#=GC scorecons_70         ________*______***_*______________________________________________________**_________*_______*____**_*___*____________________*_*__*_*_*_____*_***_*__***_____________**_***______________*_***__*__**______*___*******___*_*___________________*_____________________*___**______**_*___*_________________________________________________________________________________________
#=GC scorecons_80         ________*______***_*_______________________________________________________*______________________**__________________________*_*______*_______***_*__**_______________*_***________________***__*__**__________**_*__*___*___________________________________________*___________*________________________________________________________________________________________________
#=GC scorecons_90         _______________*_*________________________________________________________________________________**__________________________*_*______*_______***_*__**_______________*_***_________________**__*__**__________**_*__*___*___________________________________________*___________*________________________________________________________________________________________________
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