# STOCKHOLM 1.0
#=GF ID 1.10.510.10/FF/001635
#=GF DE Protein CBR-IKKE-1
#=GF AC 1.10.510.10/FF/001635
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.100
#=GS Q9U2J3/16-296      AC Q9U2J3
#=GS Q9U2J3/16-296      OS Caenorhabditis elegans
#=GS Q9U2J3/16-296      DE Uncharacterized protein
#=GS Q9U2J3/16-296      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0DJW1/7-323       AC A0DJW1
#=GS A0DJW1/7-323       OS Paramecium tetraurelia
#=GS A0DJW1/7-323       DE Uncharacterized protein
#=GS A0DJW1/7-323       DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS H3DZQ4/2-280       AC H3DZQ4
#=GS H3DZQ4/2-280       OS Pristionchus pacificus
#=GS H3DZQ4/2-280       DE Uncharacterized protein
#=GS H3DZQ4/2-280       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5SFZ4/16-297  AC A0A2G5SFZ4
#=GS A0A2G5SFZ4/16-297  OS Caenorhabditis nigoni
#=GS A0A2G5SFZ4/16-297  DE Uncharacterized protein
#=GS A0A2G5SFZ4/16-297  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8X355/16-298      AC A8X355
#=GS A8X355/16-298      OS Caenorhabditis briggsae
#=GS A8X355/16-298      DE Protein CBR-IKKE-1
#=GS A8X355/16-298      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GF SQ 5
Q9U2J3/16-296              ------GEMYTLYNDEFMAKGAYSQVYRGRTES-GR--LVAVKTARKT--ASNKADVDAMCTEIDILKKLK----GV--ANIVQYFGSKNTKIPPGSVTIETISFAMECASRSLDAEMRRPENH--KGLPSNVLIDLVVDCSMALSALREHNIAHRDIKHMNILLFPGSPTRGRRSTHLFKLCDMGCSKAISENSS-QELNSIAGTKTFLYP--------DHIPPNGHNWKTKSAYTPEQCDLWSLGCTLYFCATGEFPFESTRA-------DANLYHMAAVDLTRNPNAVA-VNLVQVENPVTKEKVFNFE---------------PVTEL-------------------------
A0DJW1/7-323               --------EYSVEED-PLGEGQFGKVHKAKSLK-NQQLSVCVKIMKKKKQFGEHLLQTVQVPEFDICKMMV----GKKYENLVQIYAVYDSD-----VEDDHAYIFMERCDQSLRQLIKRKKNEENKLFTKDEIFYIVSKITQGYLQLISANIIHRDLKPENIL------YNMIDNQLQIKIADFGLSKVMDPSSS-GQMTKKVGTQYYCAPEISNE-----QDKNAYNY---------ECDIFSLGVIIFELAILERQFKHRQIEKLKDTNFSKLYEDVLQKKEIDKEIIELLDKMITWDPKNRLTWQDLSSYFDQKQKQQKGQFPPSQQFKQQFNNPQQKQPQANAQPQLQNQYN
H3DZQ4/2-280               SDQLRENLDYECLR--SFSSGAFGKVHHGYLYSTGE--AVVIKKGKKK----------DLKGEYELLKQLSSTGVGR--THVVRVFGYTDNS---PHLNHGDFNIIMERAQCSLDILLQRASFR--AGLPAVDIIQLVADLGIVLAFLLEKQVAHRDIKPQNILVFSGA-NDPAKSQFMFKLCDFGAARETIGEES--ECHTIVGTVPFLNPEILLE-----LREHPQQYRTNQPYRAEKCDLWSLGVTIYNAATARLPWPGTGA---HPDDVRALHEN-------RRGAIAALPLAHG----------------------------PGYKYYDTI--------RADSYPRWLR---
A0A2G5SFZ4/16-297          T---TDGEKYTLFNDEAIGKGAYSEVYRGRTES-GR--LVAVKTACK------RVELQAIRGEIEILRKLK----GA--QNIVEYIGSSHSIMAPGSVTPETISFAMEYAKSSLEAEMRRPENL--KGLPANVFIDLVVDCAMALTALHEHNIAHRDIKHMNILLFPGTPTRGRRSTHLFKLCDMGCSKALMENGGLHEMRTLVGTPNLLHPHLANEMVDPRMDRNQHDWKTKQAYTPEQCDLWSLGCTLYFCATGKFPFEHERN-------NKKLYHAAVNSLTKHPEAIAMIPVIKGRDAGRREMIY------------------------------------------------
A8X355/16-298              T---TDGEKYTLFNDEAIGKGAYSEVYRGRTES-GR--LVAVKTACK------RVELQAIRGEIEILRKLK----GA--QNIVEYIGSSHSIMAPGSVTPETISFAMEYAKSSLEGEMRRPENL--KGLPANVFIDLVVDCAMALTALHEHNIAHRDIKHMNILLFPGTPTRGRRSTHLFKLCDMGCSKALMENGGLHEMRTLVGTPNLLHPHLANEMVDPRMDRNQHDWKTKQAYTSEQCDLWSLGCTLYFCATGKFPFEHERN-------NKKLYHAAVNSLTKHPKAIAMIPVVKGRDAGRREMIYE-----------------------------------------------
#=GC scorecons             100001223943244134549575596564425064003947933492000002211133249466573630000930036594346324521112264253345399353399423559345200546643346369463344533925367699969539993424213433464446965959367442344601643436992255393322500001343635453422242245996599946572396343653434300000002349752321122134367525434241321132111100000000000000000310110000000000000100010000000
#=GC scorecons_70          _________*__________*_*__**_*__________*_**___*_______________*_**_*_*_____*____*_*___*__________*________**____**_____*________**______**_________*____*_*****__***___________*____**_*_*_**_________*____***_____*_____________*______________***_***_*_*__**____________________**_____________*__________________________________________________________________
#=GC scorecons_80          _________*__________*____*_____________*_**___*_______________*____________*______*_______________________**____**_____*_________________*_________*____*_***_*__***________________*__*_*__*_______________**_____*____________________________**__***___*__*_____________________**_____________*__________________________________________________________________
#=GC scorecons_90          _________*__________*____*_____________*__*___*_______________*____________*______*_______________________**____**_____*_________________*_________*______***_*__***________________*__*_*__________________**_____*____________________________**__***______*_____________________*_________________________________________________________________________________
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