# STOCKHOLM 1.0 #=GF ID 1.10.245.10/FF/000004 #=GF DE Upstream activation factor subunit #=GF AC 1.10.245.10/FF/000004 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 88.224 #=GS Q08747/115-201 AC Q08747 #=GS Q08747/115-201 OS Saccharomyces cerevisiae S288C #=GS Q08747/115-201 DE Upstream activation factor subunit UAF30 #=GS Q08747/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q08747/115-201 DR GO; GO:0000500; GO:0001165; GO:0001181; GO:0005730; GO:0006325; GO:0042790; #=GS O74503/112-199 AC O74503 #=GS O74503/112-199 OS Schizosaccharomyces pombe 972h- #=GS O74503/112-199 DE Upstream activation factor subunit spp27 #=GS O74503/112-199 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; #=GS O74503/112-199 DR GO; GO:0000500; GO:0001181; GO:0005515; GO:0005634; GO:0005829; GO:0006361; #=GS Q05024/115-201 AC Q05024 #=GS Q05024/115-201 OS Saccharomyces cerevisiae S288C #=GS Q05024/115-201 DE Protein TRI1 #=GS Q05024/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q05024/115-201 DR GO; GO:0005634; GO:0005730; GO:0005737; #=GS Q22749/180-278 AC Q22749 #=GS Q22749/180-278 OS Caenorhabditis elegans #=GS Q22749/180-278 DE Uncharacterized protein #=GS Q22749/180-278 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q22749/180-278 DR GO; GO:0005634; GO:0006351; GO:0008134; #=GS Q9C504/27-112 AC Q9C504 #=GS Q9C504/27-112 OS Arabidopsis thaliana #=GS Q9C504/27-112 DE At1g31760 #=GS Q9C504/27-112 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9C504/27-112 DR GO; GO:0043504; GO:0097552; #=GS F4J9Z9/110-198 AC F4J9Z9 #=GS F4J9Z9/110-198 OS Arabidopsis thaliana #=GS F4J9Z9/110-198 DE SWIB complex BAF60b domain-containing protein #=GS F4J9Z9/110-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F4J9Z9/110-198 DR GO; GO:0009506; #=GS A0A178W7A8/27-112 AC A0A178W7A8 #=GS A0A178W7A8/27-112 OS Arabidopsis thaliana #=GS A0A178W7A8/27-112 DE Uncharacterized protein #=GS A0A178W7A8/27-112 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A384KKH9/110-198 AC A0A384KKH9 #=GS A0A384KKH9/110-198 OS Arabidopsis thaliana #=GS A0A384KKH9/110-198 DE Uncharacterized protein #=GS A0A384KKH9/110-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A384KE98/110-198 AC A0A384KE98 #=GS A0A384KE98/110-198 OS Arabidopsis thaliana #=GS A0A384KE98/110-198 DE Uncharacterized protein #=GS A0A384KE98/110-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178V7N9/110-198 AC A0A178V7N9 #=GS A0A178V7N9/110-198 OS Arabidopsis thaliana #=GS A0A178V7N9/110-198 DE SWIB complex BAF60b domain-containing protein #=GS A0A178V7N9/110-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A1I9LR29/110-198 AC A0A1I9LR29 #=GS A0A1I9LR29/110-198 OS Arabidopsis thaliana #=GS A0A1I9LR29/110-198 DE SWIB complex BAF60b domain-containing protein #=GS A0A1I9LR29/110-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS D7KGM1/27-112 AC D7KGM1 #=GS D7KGM1/27-112 OS Arabidopsis lyrata subsp. lyrata #=GS D7KGM1/27-112 DE SWIB complex BAF60b domain-containing protein #=GS D7KGM1/27-112 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A0L8VJB9/115-201 AC A0A0L8VJB9 #=GS A0A0L8VJB9/115-201 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VJB9/115-201 DE TRI1p sumoylated protein #=GS A0A0L8VJB9/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS J8LQ21/115-201 AC J8LQ21 #=GS J8LQ21/115-201 OS Saccharomyces arboricola H-6 #=GS J8LQ21/115-201 DE YMR233W #=GS J8LQ21/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; #=GS H0GLD6/116-201 AC H0GLD6 #=GS H0GLD6/116-201 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GLD6/116-201 DE Tri1p #=GS H0GLD6/116-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8RDP8/125-212 AC A0A0L8RDP8 #=GS A0A0L8RDP8/125-212 OS Saccharomyces eubayanus #=GS A0A0L8RDP8/125-212 DE TRI1-like protein #=GS A0A0L8RDP8/125-212 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; #=GS C7GRB7/115-201 AC C7GRB7 #=GS C7GRB7/115-201 OS Saccharomyces cerevisiae JAY291 #=GS C7GRB7/115-201 DE Tri1p #=GS C7GRB7/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1NYN9/115-201 AC N1NYN9 #=GS N1NYN9/115-201 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1NYN9/115-201 DE Tri1p #=GS N1NYN9/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LMC2/115-201 AC B3LMC2 #=GS B3LMC2/115-201 OS Saccharomyces cerevisiae RM11-1a #=GS B3LMC2/115-201 DE Uncharacterized protein #=GS B3LMC2/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZF98/115-201 AC C8ZF98 #=GS C8ZF98/115-201 OS Saccharomyces cerevisiae EC1118 #=GS C8ZF98/115-201 DE Tri1p #=GS C8ZF98/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZMU6/115-201 AC A6ZMU6 #=GS A6ZMU6/115-201 OS Saccharomyces cerevisiae YJM789 #=GS A6ZMU6/115-201 DE Conserved protein #=GS A6ZMU6/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B5VQ01/115-201 AC B5VQ01 #=GS B5VQ01/115-201 OS Saccharomyces cerevisiae AWRI1631 #=GS B5VQ01/115-201 DE YMR233Wp-like protein #=GS B5VQ01/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WKU1/115-201 AC G2WKU1 #=GS G2WKU1/115-201 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WKU1/115-201 DE K7_Ymr233wp #=GS G2WKU1/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A0A0L8VH75/115-201 AC A0A0L8VH75 #=GS A0A0L8VH75/115-201 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VH75/115-201 DE UAF30p Subunit of UAF (Upstream activation factor) complex #=GS A0A0L8VH75/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS B3LJW0/115-201 AC B3LJW0 #=GS B3LJW0/115-201 OS Saccharomyces cerevisiae RM11-1a #=GS B3LJW0/115-201 DE Uncharacterized protein #=GS B3LJW0/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GNW6/115-201 AC C7GNW6 #=GS C7GNW6/115-201 OS Saccharomyces cerevisiae JAY291 #=GS C7GNW6/115-201 DE Uaf30p #=GS C7GNW6/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1NVY7/115-201 AC N1NVY7 #=GS N1NVY7/115-201 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1NVY7/115-201 DE Uaf30p #=GS N1NVY7/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZH45/115-201 AC C8ZH45 #=GS C8ZH45/115-201 OS Saccharomyces cerevisiae EC1118 #=GS C8ZH45/115-201 DE Uaf30p #=GS C8ZH45/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS H0GNZ8/98-184 AC H0GNZ8 #=GS H0GNZ8/98-184 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GNZ8/98-184 DE Uaf30p #=GS H0GNZ8/98-184 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A6ZPD0/115-201 AC A6ZPD0 #=GS A6ZPD0/115-201 OS Saccharomyces cerevisiae YJM789 #=GS A6ZPD0/115-201 DE Upstream activation factor subunit #=GS A6ZPD0/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WNG1/115-201 AC G2WNG1 #=GS G2WNG1/115-201 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WNG1/115-201 DE K7_Uaf30p #=GS G2WNG1/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B5VSH3/115-201 AC B5VSH3 #=GS B5VSH3/115-201 OS Saccharomyces cerevisiae AWRI1631 #=GS B5VSH3/115-201 DE YOR295Wp-like protein #=GS B5VSH3/115-201 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS D7L975/110-197 AC D7L975 #=GS D7L975/110-197 OS Arabidopsis lyrata subsp. lyrata #=GS D7L975/110-197 DE SWIB complex BAF60b domain-containing protein #=GS D7L975/110-197 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GF SQ 33 Q08747/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD O74503/112-199 -----------PANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFE-VDTLHMFTMNKYLTNLMTKIPDDQL Q05024/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK Q22749/180-278 KKVKDPNADMSGVFGPMTKLCYISTELQQVTKDQWMKRCDVVKALWDYIKENNLKDPKNGQYIICDSTLESIFK-KNRLKGFGMVKFLTRHIIGTSDMAP Q9C504/27-112 ----------AGEGKGIFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMKLLSPHFPK----SV F4J9Z9/110-198 ----------KKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFR-VKTINMFQMNKALTKHIWPLGDGDG A0A178W7A8/27-112 ----------AGEGKGIFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMKLLSPHFPK----SV A0A384KKH9/110-198 ----------KKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFR-VKTINMFQMNKALTKHIWPLGDGDG A0A384KE98/110-198 ----------KKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFR-VKTINMFQMNKALTKHIWPLGDGDG A0A178V7N9/110-198 ----------KKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFR-VKTINMFQMNKALTKHIWPLGDGDG A0A1I9LR29/110-198 ----------KKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFR-VKTINMFQMNKALTKHIWPLGDGDG D7KGM1/27-112 ----------AGEGKGIFKTLPVSQQLASFAGESELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMKLLSPHFPK----SV A0A0L8VJB9/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK J8LQ21/115-201 -----------DSNSISVRKVLLSAPLQAFLGAEELPRTQVVKMIWQYIKEHDLQNPSDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK H0GLD6/116-201 ------------SNRISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK A0A0L8RDP8/125-212 ----------TDSNSISVRKVLLSAPLQKFLGAEELPRTQVVKMIWKYIKENDLQNPEDRREILCDEKMVPIFG--KKMTMFSMNKLLTKHLFNPEEIVK C7GRB7/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK N1NYN9/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK B3LMC2/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK C8ZF98/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK A6ZMU6/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK B5VQ01/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK G2WKU1/115-201 -----------DSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG--KKMTMFSMNKLLTKHLFNPDEIVK A0A0L8VH75/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD B3LJW0/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD C7GNW6/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD N1NVY7/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD C8ZH45/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD H0GNZ8/98-184 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD A6ZPD0/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD G2WNG1/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD B5VSH3/115-201 -----------SKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYVKAHNLQNPNNKKEILCDEKLELILG--KSTNMFEMHKILASHMTEPKKISD D7L975/110-197 ----------KKRGGGFTKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIRENDLQDPKDRRKIVCDELLHSLFR-VKTINMFQMSKALTKHIWPLGDGD- #=GC scorecons 0000000000044444557443794494555844684965777459498746698695666695997575477500644577484949648534434343 #=GC scorecons_70 __________________*___**__*____*__**_**_***__*_***_******_***_*_***_*__**___*___**_*_*_*__*_________ #=GC scorecons_80 ______________________**__*____*___*_*__***__*_***___**_*_____*_***_____________**_*_*_*__*_________ #=GC scorecons_90 _______________________*__*____*___*_*_______*_*_____**_*_____*_**___________________*_*__*_________ //