# STOCKHOLM 1.0
#=GF ID 4.10.860.120/FF/000017
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 4.10.860.120/FF/000017
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.252
#=GS G5ED21/6-131       AC G5ED21
#=GS G5ED21/6-131       OS Caenorhabditis elegans
#=GS G5ED21/6-131       DE DNA-directed RNA polymerase subunit
#=GS G5ED21/6-131       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS B8C4Z8/5-135       AC B8C4Z8
#=GS B8C4Z8/5-135       OS Thalassiosira pseudonana
#=GS B8C4Z8/5-135       DE DNA-directed RNA polymerase subunit
#=GS B8C4Z8/5-135       DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS B7P2L8/2-130       AC B7P2L8
#=GS B7P2L8/2-130       OS Ixodes scapularis
#=GS B7P2L8/2-130       DE DNA-directed RNA polymerase subunit
#=GS B7P2L8/2-130       DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A2A6B3R6/60-184  AC A0A2A6B3R6
#=GS A0A2A6B3R6/60-184  OS Pristionchus pacificus
#=GS A0A2A6B3R6/60-184  DE DNA-directed RNA polymerase subunit
#=GS A0A2A6B3R6/60-184  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS G0MQB6/6-133       AC G0MQB6
#=GS G0MQB6/6-133       OS Caenorhabditis brenneri
#=GS G0MQB6/6-133       DE DNA-directed RNA polymerase subunit
#=GS G0MQB6/6-133       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A261C817/6-130   AC A0A261C817
#=GS A0A261C817/6-130   OS Caenorhabditis latens
#=GS A0A261C817/6-130   DE DNA-directed RNA polymerase subunit
#=GS A0A261C817/6-130   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A1I7TDM2/5-129   AC A0A1I7TDM2
#=GS A0A1I7TDM2/5-129   OS Caenorhabditis tropicalis
#=GS A0A1I7TDM2/5-129   DE DNA-directed RNA polymerase subunit
#=GS A0A1I7TDM2/5-129   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS K7H648/6-131       AC K7H648
#=GS K7H648/6-131       OS Caenorhabditis japonica
#=GS K7H648/6-131       DE DNA-directed RNA polymerase subunit
#=GS K7H648/6-131       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A8XYH3/6-123       AC A8XYH3
#=GS A8XYH3/6-123       OS Caenorhabditis briggsae
#=GS A8XYH3/6-123       DE DNA-directed RNA polymerase subunit
#=GS A8XYH3/6-123       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS H3FM78/8-132       AC H3FM78
#=GS H3FM78/8-132       OS Pristionchus pacificus
#=GS H3FM78/8-132       DE DNA-directed RNA polymerase subunit
#=GS H3FM78/8-132       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS K7H649/6-131       AC K7H649
#=GS K7H649/6-131       OS Caenorhabditis japonica
#=GS K7H649/6-131       DE DNA-directed RNA polymerase subunit
#=GS K7H649/6-131       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GF SQ 11
G5ED21/6-131               RNGEEPYMQFSNFKLRSYFPHEIDKLSVLKITQTKTFDEVGHPIAGGLYDPILGPD-----NTFDMCMTCNQYERHCPGHMGHIQLAVPVFNPLLFQFTYN----------------LLKGSCVHCHRLTCKGDGVNARMLLAQLRC-----
B8C4Z8/5-135               NQAIIRH-QPTSVQFGVYTDDEVRQRSVCEISSSVAYDALNTPLPRGLYDPLLGPTAGGGGGASAYCITCGNVQNLCPGHFGHIELCVPVYHPLFFPKLLL----------------FMKMKCLACHHFR--LSKRACRVFCTKLHLVDV--
B7P2L8/2-130               DFDKIPYRSVDGVSFNVFSTDELLRLSVLSVTCSETFDIVGHPTKGGLHDSLLGPS-----DRDEVCATCGLGFVACPGHIGHISLPLLTFNPLFFRTLYQ----------------LLRGSCFGCARLL--SPPAVCQLTLAQLQVLQYGA
A0A2A6B3R6/60-184          RCGEEPYMQFDKMELRNYYPHEMEKLSVLEITQTKTFDQIGHPIRGGLYDPMLGAT-----DHFDRCVTCDQYDNMCPGHFGHISLDVPVFNPLLYQLTHN----------------LMKGSCVHCHRLMCNSDVIQCKQ--NSLEQD----
G0MQB6/6-133               KNGEEPYMQFSNFKLRNYFPHEIDKLSVLKITQTKTFDEVGHPIAGGLYDPILGPD-----NTFDQCLTCNQYERHCPGHMGHIQLSVPVFNPLLFQFTFN----------------LLKGSCVHCHRLTCKGDGVNAHLLLAQLRCFE---
A0A261C817/6-130           RNGEEPYMQFSNFKLRSYFPHEIDKLSVLKVTQTKTFDEVGHPIAGGLYDPILGPD-----NTFDMCLTCNQYERHCPGHMGHIQLAVPVFNPLLFQFTYN----------------LLKGSCVHCHRLTCKGDGASARILLSQLR------
A0A1I7TDM2/5-129           KNGDEPFMQFSNFKLRSYFPHEIDKLSVLKITQTKTFDEVGHPIAGGLYDPILGPD-----NNFDMCLTCNQYERHCPGHMGHIQLAVPVFNPLLFQFTYN----------------LLKGSCVHCHRLTCKGDGVNARLLLAQLR------
K7H648/6-131               RNGEEPYMQFSNFKLRSYFPHEVDKLSVLRITQTKTFDEVGHPISGGLYDPILGPD-----NTFDQCLTCHQYERHCPGHMGHIQLAVPVFNPLLFQFTYN----------------LLKGSCVHCHRLTCKGDGVNARMLLAQLRC-----
A8XYH3/6-123               KNGEEPYMQFSNFKLRNYFPHEIDKLSVLKVIQTKTFDEVGHPIEGGLYDPVLGPD-----NIRDNCRTCNQYERHCPGHMGHIQLAVPVFNPLLFQFTYNVSFMKVISKSYISILQLLKGSC-----------------------------
H3FM78/8-132               RCGEEPYMQFDKMELRNYYPHEMEKLSVLEITQTKTFDQIGHPIRGGLYDPMLGAT-----DHFDRCVTCDQYDNMCPGHFGHISLDVPVFNPLLYQLTHN----------------LMKGSCVHCHRLMCNSDGVNSRLIIAQLR------
K7H649/6-131               RNGEEPYMQFSNFKLRSYFPHEVDKLSVLRITQTKTFDEVGHPISGGLYDPILGPD-----NTFDQCLTCHQYERHCPGHMGHIQLAVPVFNPLLFQFTYN----------------LLKGSCVHCHRLTCKGDGVNARMLLAQLRC-----
#=GC scorecons             43655674754454654845695466996476565789467696379979759974000005336293994544439999599949377787996863555000000000000000076766943645522133232343224463100000
#=GC scorecons_70          _____**_*_____*__*___*__*****_*__*_***_****__******_***___________*_**______****_***_*_*********_____________________******__*__________________*_______
#=GC scorecons_80          ______*__________*___*____**_______***____*___*****_***___________*_**______****_***_*_*******_*_____________________*_*__*_____________________________
#=GC scorecons_90          _________________*___*____**_________*____*___**_*__**____________*_**______****_***_*______**____________________________*_____________________________
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