# STOCKHOLM 1.0 #=GF ID 4.10.60.10/FF/000028 #=GF DE Gag polyprotein #=GF AC 4.10.60.10/FF/000028 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 21.871 #=GS 1wwgA00/1-56 AC P03332 #=GS 1wwgA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wwgA00/1-56 DE Gag polyprotein #=GS 1wwgA00/1-56 DR CATH; 1wwg; A:1-56; #=GS 1wwgA00/1-56 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wwgA00/1-56 DR GO; GO:0005515; #=GS P03355/479-534 AC P03355 #=GS P03355/479-534 OS Moloney murine leukemia virus isolate Shinnick #=GS P03355/479-534 DE Gag-Pol polyprotein #=GS P03355/479-534 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03355/479-534 DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; #=GS P03355/479-534 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS A1Z651/477-532 AC A1Z651 #=GS A1Z651/477-532 OS Xenotropic MuLV-related virus VP62 #=GS A1Z651/477-532 DE Gag-Pol polyprotein #=GS A1Z651/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS A1Z651/477-532 DR GO; GO:0042802; #=GS A1Z651/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS A0A068EWW2/478-533 AC A0A068EWW2 #=GS A0A068EWW2/478-533 OS Mus musculus #=GS A0A068EWW2/478-533 DE Gag polyprotein #=GS A0A068EWW2/478-533 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS Q6YIY0/477-532 AC Q6YIY0 #=GS Q6YIY0/477-532 OS Mus musculus #=GS Q6YIY0/477-532 DE Gag protein #=GS Q6YIY0/477-532 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS 1wwfA00/1-56 AC P03332 #=GS 1wwfA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wwfA00/1-56 DE Gag polyprotein #=GS 1wwfA00/1-56 DR CATH; 1wwf; A:1-56; #=GS 1wwfA00/1-56 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wwfA00/1-56 DR GO; GO:0005515; #=GS 1wweA00/1-56 AC P03332 #=GS 1wweA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wweA00/1-56 DE Gag polyprotein #=GS 1wweA00/1-56 DR CATH; 1wwe; A:1-56; #=GS 1wweA00/1-56 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wweA00/1-56 DR GO; GO:0005515; #=GS 1wwdA00/1-56 AC P03332 #=GS 1wwdA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wwdA00/1-56 DE Gag polyprotein #=GS 1wwdA00/1-56 DR CATH; 1wwd; A:1-56; #=GS 1wwdA00/1-56 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wwdA00/1-56 DR GO; GO:0005515; #=GS 1u6pA00/1-56 AC P03332 #=GS 1u6pA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1u6pA00/1-56 DE Gag polyprotein #=GS 1u6pA00/1-56 DR CATH; 1u6p; A:1-56; #=GS 1u6pA00/1-56 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1u6pA00/1-56 DR GO; GO:0005515; #=GS A0A0P6CEX0/269-324 AC A0A0P6CEX0 #=GS A0A0P6CEX0/269-324 OS Daphnia magna #=GS A0A0P6CEX0/269-324 DE Putative PLAC4 protein #=GS A0A0P6CEX0/269-324 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS Q2F7J3/477-532 AC Q2F7J3 #=GS Q2F7J3/477-532 OS Xenotropic MuLV-related virus VP35 #=GS Q2F7J3/477-532 DE Gag-Pol polyprotein #=GS Q2F7J3/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J3/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J0/477-532 AC Q2F7J0 #=GS Q2F7J0/477-532 OS Xenotropic MuLV-related virus VP42 #=GS Q2F7J0/477-532 DE Gag-Pol polyprotein #=GS Q2F7J0/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J0/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS D0UFA3/477-532 AC D0UFA3 #=GS D0UFA3/477-532 OS Xenotropic MuLV-related virus #=GS D0UFA3/477-532 DE Putative gag-pro-pol polyprotein #=GS D0UFA3/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS D0UFA3/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P03356/478-533 AC P03356 #=GS P03356/478-533 OS AKR (endogenous) murine leukemia virus #=GS P03356/478-533 DE Gag-Pol polyprotein #=GS P03356/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03356/478-533 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q7SVK7/478-533 AC Q7SVK7 #=GS Q7SVK7/478-533 OS Murine leukemia virus (strain BM5 ECO) #=GS Q7SVK7/478-533 DE Gag-pol polyprotein #=GS Q7SVK7/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q7SVK7/478-533 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P11227/478-533 AC P11227 #=GS P11227/478-533 OS Radiation murine leukemia virus #=GS P11227/478-533 DE Gag-Pol polyprotein #=GS P11227/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P11227/478-533 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P08361/477-532 AC P08361 #=GS P08361/477-532 OS Cas-Br-E murine leukemia virus #=GS P08361/477-532 DE Gag-Pol polyprotein #=GS P08361/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P08361/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P03332/479-534 AC P03332 #=GS P03332/479-534 OS Moloney murine leukemia virus isolate Shinnick #=GS P03332/479-534 DE Gag polyprotein #=GS P03332/479-534 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03332/479-534 DR GO; GO:0005515; #=GS Q8UN00/479-534 AC Q8UN00 #=GS Q8UN00/479-534 OS Moloney murine leukemia virus #=GS Q8UN00/479-534 DE Pr180 Gag-Pro-Pol polyprotein #=GS Q8UN00/479-534 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q8UN00/479-534 DR GO; GO:0005515; #=GS P26806/479-534 AC P26806 #=GS P26806/479-534 OS Friend murine leukemia virus (ISOLATE FB29) #=GS P26806/479-534 DE Gag polyprotein #=GS P26806/479-534 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P29168/477-532 AC P29168 #=GS P29168/477-532 OS Murine leukemia virus (strain DEF27) #=GS P29168/477-532 DE Gag polyprotein #=GS P29168/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P21435/481-536 AC P21435 #=GS P21435/481-536 OS HoMuLV murine leukemia virus #=GS P21435/481-536 DE Gag polyprotein #=GS P21435/481-536 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P23090/470-525 AC P23090 #=GS P23090/470-525 OS Duplan murine leukemia virus #=GS P23090/470-525 DE Gag polyprotein #=GS P23090/470-525 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03336/478-533 AC P03336 #=GS P03336/478-533 OS AKR (endogenous) murine leukemia virus #=GS P03336/478-533 DE Gag polyprotein #=GS P03336/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A220A2S1/478-533 AC A0A220A2S1 #=GS A0A220A2S1/478-533 OS Murine leukemia virus #=GS A0A220A2S1/478-533 DE Putative gag polyprotein #=GS A0A220A2S1/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A068EUF8/478-533 AC A0A068EUF8 #=GS A0A068EUF8/478-533 OS Polytropic murine leukemia virus #=GS A0A068EUF8/478-533 DE Gag polyprotein #=GS A0A068EUF8/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P29167/478-533 AC P29167 #=GS P29167/478-533 OS Murine leukemia virus (strain BM5 ECO) #=GS P29167/478-533 DE Gag polyprotein #=GS P29167/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26805/479-534 AC P26805 #=GS P26805/479-534 OS Friend murine leukemia virus (ISOLATE PVC-211) #=GS P26805/479-534 DE Gag polyprotein #=GS P26805/479-534 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P27460/477-532 AC P27460 #=GS P27460/477-532 OS Cas-Br-E murine leukemia virus #=GS P27460/477-532 DE Gag polyprotein #=GS P27460/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q2F7J2/477-532 AC Q2F7J2 #=GS Q2F7J2/477-532 OS Xenotropic MuLV-related virus VP35 #=GS Q2F7J2/477-532 DE Gag polyprotein #=GS Q2F7J2/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q27ID9/477-532 AC Q27ID9 #=GS Q27ID9/477-532 OS Xenotropic MuLV-related virus VP62 #=GS Q27ID9/477-532 DE Gag polyprotein #=GS Q27ID9/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS D0UFA4/477-532 AC D0UFA4 #=GS D0UFA4/477-532 OS Xenotropic MuLV-related virus #=GS D0UFA4/477-532 DE Gag protein #=GS D0UFA4/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7I9/477-532 AC Q2F7I9 #=GS Q2F7I9/477-532 OS Xenotropic MuLV-related virus VP42 #=GS Q2F7I9/477-532 DE Gag polyprotein #=GS Q2F7I9/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q8UN02/567-622 AC Q8UN02 #=GS Q8UN02/567-622 OS Moloney murine leukemia virus neuropathogenic variant ts1-92b #=GS Q8UN02/567-622 DE Glyco-Gag protein #=GS Q8UN02/567-622 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P11269/478-533 AC P11269 #=GS P11269/478-533 OS Radiation murine leukemia virus #=GS P11269/478-533 DE Gag polyprotein #=GS P11269/478-533 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P0DOH4/565-620 AC P0DOH4 #=GS P0DOH4/565-620 OS Cas-Br-E murine leukemia virus #=GS P0DOH4/565-620 DE Glyco-Gag protein #=GS P0DOH4/565-620 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P0DOG8/566-621 AC P0DOG8 #=GS P0DOG8/566-621 OS AKR (endogenous) murine leukemia virus #=GS P0DOG8/566-621 DE Glyco-Gag protein #=GS P0DOG8/566-621 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q9E7M1/477-532 AC Q9E7M1 #=GS Q9E7M1/477-532 OS DG-75 Murine leukemia virus #=GS Q9E7M1/477-532 DE Putative gag-pro-pol polyprotein #=GS Q9E7M1/477-532 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A126QCH6/481-536 AC A0A126QCH6 #=GS A0A126QCH6/481-536 OS Murine leukemia virus #=GS A0A126QCH6/481-536 DE Putative gag-pro-pol polyprotein #=GS A0A126QCH6/481-536 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q5PYI3/474-529 AC Q5PYI3 #=GS Q5PYI3/474-529 OS Murine leukemia virus #=GS Q5PYI3/474-529 DE Gag-pol polyprotein #=GS Q5PYI3/474-529 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q83371/169-224 AC Q83371 #=GS Q83371/169-224 OS Moloney murine leukemia virus #=GS Q83371/169-224 DE Reverse transcriptase #=GS Q83371/169-224 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GF SQ 41 1wwgA00/1-56 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03355/479-534 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A1Z651/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A068EWW2/478-533 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q6YIY0/477-532 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1wwfA00/1-56 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1wweA00/1-56 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1wwdA00/1-56 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1u6pA00/1-56 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A0P6CEX0/269-324 ATVVIGQRQDRQGGERRRPQLNKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q2F7J3/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q2F7J0/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL D0UFA3/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03356/478-533 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q7SVK7/478-533 ATVVTGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P11227/478-533 ATVVTGQRQDRQGGERKRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P08361/477-532 ATVVSGQKQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03332/479-534 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q8UN00/479-534 ATVVSGQRQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P26806/479-534 ATVVSGQRQDRQGGERRRPQLDHDQCAYCKEKGHWARDCPKKPRGPRGPRPQASLL P29168/477-532 ATVVTGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P21435/481-536 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P23090/470-525 ATVVTGQRQDRQGGERRRPQLDEDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03336/478-533 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A220A2S1/478-533 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A068EUF8/478-533 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P29167/478-533 ATVVTGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P26805/479-534 ATVVSGQRQDRQGGERRRPQLDHDQCAYCKEKGHWARDCPKKPRGPRGPRPQASLL P27460/477-532 ATVVSGQKQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q2F7J2/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q27ID9/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL D0UFA4/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q2F7I9/477-532 ATVVIGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q8UN02/567-622 ATVVSGQRQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P11269/478-533 ATVVTGQRQDRQGGERKRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P0DOH4/565-620 ATVVSGQKQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P0DOG8/566-621 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q9E7M1/477-532 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A126QCH6/481-536 ATVVSGQRQDRQGGERRRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q5PYI3/474-529 ATVVSSQRQDRQGGERKRPQLEKDQCAYCKEKGHWARDCPKKPRGPRGPRPQTSLL Q83371/169-224 ATVVIGQEQDRQEGERKRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL #=GC scorecons 99995897999989998969986999999999999989999999999999998999 #=GC scorecons_70 ****_*************************************************** #=GC scorecons_80 ****_**_**********_***_********************************* #=GC scorecons_90 ****_**_********_*_***_********************************* //